PDB Chemical Component GC7

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for GC7

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
N1	C1	1.490	1.468
N1	HN11	1.020	1.008
N1	HN12	1.020	1.009
C1	C2	1.531	1.529
C1	H11	1.115	1.090
C1	H12	1.115	1.091
C2	C3	1.519	1.530
C2	H21	1.115	1.090
C2	H22	1.116	1.090
C3	C4	1.510	1.529
C3	H31	1.115	1.090
C3	H32	1.114	1.090
C4	C5	1.513	1.530
C4	H41	1.115	1.089
C4	H42	1.116	1.090
C5	C6	1.507	1.529
C5	H51	1.114	1.090
C5	H52	1.114	1.090
C6	C7	1.532	1.529
C6	H61	1.116	1.090
C6	H62	1.116	1.090
C7	N8	1.457	1.468
C7	H71	1.115	1.090
C7	H72	1.114	1.090
N8	C9	1.333	1.468
N8	HN8	1.021	1.009
C9	NH1	1.335	1.468
C9	NH2	1.335	1.469
C9	H9	1.114	1.090
NH1	HH11	1.020	1.009
NH1	HH12	1.019	1.010
NH2	HH21	1.020	1.009
NH2	HH22	1.021	1.009

Bond Angles for GC7

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C1	N1	HN11	111.9	106.8
C1	N1	HN12	111.3	106.7
N1	C1	C2	111.9	109.6
N1	C1	H11	111.3	109.5
N1	C1	H12	111.3	109.4
HN11	N1	HN12	111.4	106.7
C2	C1	H11	111.3	109.5
C2	C1	H12	111.3	109.5
C1	C2	C3	109.7	109.5
C1	C2	H21	112.2	109.5
C1	C2	H22	112.2	109.5
H11	C1	H12	99.1	109.4
C3	C2	H21	112.1	109.4
C3	C2	H22	112.1	109.5
C2	C3	C4	112.1	109.5
C2	C3	H31	111.3	109.4
C2	C3	H32	111.2	109.5
H21	C2	H22	98.2	109.5
C4	C3	H31	111.2	109.5
C4	C3	H32	111.2	109.5
C3	C4	C5	110.9	109.5
C3	C4	H41	111.7	109.5
C3	C4	H42	111.7	109.5
H31	C3	H32	99.2	109.5
C5	C4	H41	111.7	109.5
C5	C4	H42	111.7	109.4
C4	C5	C6	110.6	109.5
C4	C5	H51	111.8	109.5
C4	C5	H52	111.8	109.5
H41	C4	H42	98.6	109.5
C6	C5	H51	111.7	109.5
C6	C5	H52	111.7	109.5
C5	C6	C7	114.0	109.5
C5	C6	H61	110.6	109.5
C5	C6	H62	110.6	109.5
H51	C5	H52	98.7	109.5
C7	C6	H61	110.6	109.4
C7	C6	H62	110.6	109.5
C6	C7	N8	109.2	109.5
C6	C7	H71	112.3	109.4
C6	C7	H72	112.3	109.5
H61	C6	H62	99.6	109.5
N8	C7	H71	112.3	109.4
N8	C7	H72	112.3	109.5
C7	N8	C9	126.3	106.8
C7	N8	HN8	106.3	106.7
H71	C7	H72	98.1	109.4
C9	N8	HN8	106.3	106.7
N8	C9	NH1	120.6	109.6
N8	C9	NH2	119.9	109.5
N8	C9	H9	62.2	109.4
NH1	C9	NH2	119.6	109.5
NH1	C9	H9	80.7	109.5
C9	NH1	HH11	120.5	106.7
C9	NH1	HH12	108.2	106.7
NH2	C9	H9	129.9	109.4
C9	NH2	HH21	119.9	106.6
C9	NH2	HH22	108.5	106.7
HH11	NH1	HH12	108.3	106.8
HH21	NH2	HH22	108.4	106.7

Torsion Angles for GC7

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
HN11	N1	C1	HN12	125.4	246.2
C2	C1	N1	H11	234.8	239.9
C2	C1	N1	H12	125.2	120.1
N1	C1	C2	C3	180.0	180.1
N1	C1	C2	H21	305.3	300.0
N1	C1	C2	H22	54.7	60.0
H11	C1	N1	H12	250.5	240.1
C1	N1	HN11	HN12	234.7	113.8
HN11	N1	C1	C2	180.0	180.0
HN11	N1	C1	H11	305.3	300.1
HN11	N1	C1	H12	54.8	60.0
C1	N1	HN12	HN11	125.6	246.1
HN12	N1	C1	C2	54.7	293.8
HN12	N1	C1	H11	179.9	53.9
HN12	N1	C1	H12	289.4	173.8
C2	C1	N1	HN11	180.0	180.0
C2	C1	N1	HN12	54.7	293.8
N1	C1	C2	H11	125.3	120.1
N1	C1	C2	H12	234.8	240.0
H11	C1	C2	H12	109.5	119.9
C3	C2	C1	H21	234.7	240.0
C3	C2	C1	H22	125.3	120.0
C1	C2	C3	C4	187.4	180.0
C1	C2	C3	H31	312.6	300.0
C1	C2	C3	H32	62.2	59.9
H21	C2	C1	H22	250.6	240.0
H11	C1	N1	HN11	305.3	300.1
H11	C1	N1	HN12	179.9	53.9
N1	C1	H11	C2	234.4	239.9
N1	C1	H11	H12	117.2	119.9
C2	C1	H11	H12	242.8	240.0
H11	C1	C2	C3	54.7	60.0
H11	C1	C2	H21	180.0	180.0
H11	C1	C2	H22	289.5	300.0
H12	C1	N1	HN11	54.8	60.0
H12	C1	N1	HN12	289.4	173.8
N1	C1	H12	C2	125.6	120.1
N1	C1	H12	H11	242.8	240.1
C2	C1	H12	H11	117.2	120.0
H12	C1	C2	C3	305.2	300.0
H12	C1	C2	H21	70.5	60.0
H12	C1	C2	H22	180.0	180.0
C3	C2	C1	H11	54.7	60.0
C3	C2	C1	H12	305.2	300.0
C1	C2	C3	H21	125.3	120.0
C1	C2	C3	H22	234.7	239.9
H21	C2	C3	H22	109.4	119.9
C4	C3	C2	H31	234.8	240.0
C4	C3	C2	H32	125.2	120.1
C2	C3	C4	C5	182.6	179.9
C2	C3	C4	H41	307.9	300.0
C2	C3	C4	H42	57.4	60.0
H31	C3	C2	H32	250.5	240.1
H21	C2	C1	H11	180.0	180.0
H21	C2	C1	H12	70.5	60.0
C1	C2	H21	C3	236.1	240.0
C1	C2	H21	H22	118.1	120.0
C3	C2	H21	H22	242.0	240.1
H21	C2	C3	C4	62.1	60.0
H21	C2	C3	H31	187.3	180.0
H21	C2	C3	H32	296.9	299.9
H22	C2	C1	H11	289.5	300.0
H22	C2	C1	H12	180.0	180.0
C1	C2	H22	C3	123.9	120.1
C1	C2	H22	H21	241.9	240.0
C3	C2	H22	H21	118.0	119.9
H22	C2	C3	C4	312.7	300.1
H22	C2	C3	H31	77.9	60.1
H22	C2	C3	H32	187.5	180.0
C4	C3	C2	H21	62.1	60.0
C4	C3	C2	H22	312.7	300.1
C2	C3	C4	H31	125.2	120.0
C2	C3	C4	H32	234.8	240.0
H31	C3	C4	H32	109.5	120.0
C5	C4	C3	H41	234.7	240.0
C5	C4	C3	H42	125.3	119.9
C3	C4	C5	C6	179.8	180.0
C3	C4	C5	H51	305.1	300.0
C3	C4	C5	H52	54.6	60.0
H41	C4	C3	H42	250.6	239.9
H31	C3	C2	H21	187.3	180.0
H31	C3	C2	H22	77.9	60.1
C2	C3	H31	C4	234.3	240.0
C2	C3	H31	H32	117.2	119.9
C4	C3	H31	H32	242.9	240.0
H31	C3	C4	C5	57.4	60.0
H31	C3	C4	H41	182.7	180.0
H31	C3	C4	H42	292.1	300.0
H32	C3	C2	H21	296.9	299.9
H32	C3	C2	H22	187.5	180.0
C2	C3	H32	C4	125.7	120.1
C2	C3	H32	H31	242.8	240.1
C4	C3	H32	H31	117.1	120.0
H32	C3	C4	C5	307.8	300.0
H32	C3	C4	H41	73.1	60.0
H32	C3	C4	H42	182.6	180.0
C5	C4	C3	H31	57.4	60.0
C5	C4	C3	H32	307.8	300.0
C3	C4	C5	H41	125.3	120.0
C3	C4	C5	H42	234.7	240.0
H41	C4	C5	H42	109.4	120.0
C6	C5	C4	H51	234.8	240.0
C6	C5	C4	H52	125.2	120.0
C4	C5	C6	C7	186.0	180.1
C4	C5	C6	H61	311.3	300.0
C4	C5	C6	H62	60.7	60.0
H51	C5	C4	H52	250.5	240.0
H41	C4	C3	H31	182.7	180.0
H41	C4	C3	H32	73.1	60.0
C3	C4	H41	C5	235.1	239.9
C3	C4	H41	H42	117.6	120.0
C5	C4	H41	H42	242.5	240.1
H41	C4	C5	C6	54.5	60.0
H41	C4	C5	H51	179.7	180.0
H41	C4	C5	H52	289.3	300.0
H42	C4	C3	H31	292.1	300.0
H42	C4	C3	H32	182.6	180.0
C3	C4	H42	C5	124.8	120.0
C3	C4	H42	H41	242.4	240.0
C5	C4	H42	H41	117.6	120.0
H42	C4	C5	C6	305.1	300.0
H42	C4	C5	H51	70.4	60.0
H42	C4	C5	H52	179.9	180.0
C6	C5	C4	H41	54.5	60.0
C6	C5	C4	H42	305.1	300.0
C4	C5	C6	H51	125.3	120.0
C4	C5	C6	H52	234.7	240.0
H51	C5	C6	H52	109.5	120.0
C7	C6	C5	H61	234.7	240.0
C7	C6	C5	H62	125.3	120.1
C5	C6	C7	N8	179.9	180.0
C5	C6	C7	H71	305.2	300.0
C5	C6	C7	H72	54.7	59.9
H61	C6	C5	H62	250.6	240.0
H51	C5	C4	H41	179.7	180.0
H51	C5	C4	H42	70.4	60.0
C4	C5	H51	C6	235.4	239.9
C4	C5	H51	H52	117.7	120.0
C6	C5	H51	H52	242.3	240.0
H51	C5	C6	C7	60.8	60.0
H51	C5	C6	H61	186.1	180.0
H51	C5	C6	H62	295.5	300.0
H52	C5	C4	H41	289.3	300.0
H52	C5	C4	H42	179.9	180.0
C4	C5	H52	C6	124.6	120.1
C4	C5	H52	H51	242.3	240.0
C6	C5	H52	H51	117.7	120.0
H52	C5	C6	C7	311.3	300.1
H52	C5	C6	H61	76.6	60.0
H52	C5	C6	H62	186.0	180.0
C7	C6	C5	H51	60.8	60.0
C7	C6	C5	H52	311.3	300.1
C5	C6	C7	H61	125.3	120.0
C5	C6	C7	H62	234.7	240.0
H61	C6	C7	H62	109.4	120.0
N8	C7	C6	H71	234.8	240.0
N8	C7	C6	H72	125.3	120.1
C6	C7	N8	C9	185.3	180.0
C6	C7	N8	HN8	60.0	293.8
H71	C7	C6	H72	250.5	240.1
H61	C6	C5	H51	186.1	180.0
H61	C6	C5	H52	76.6	60.0
C5	C6	H61	C7	232.8	240.0
C5	C6	H61	H62	116.4	120.0
C7	C6	H61	H62	243.6	240.0
H61	C6	C7	N8	54.6	60.0
H61	C6	C7	H71	179.8	180.0
H61	C6	C7	H72	289.4	299.9
H62	C6	C5	H51	295.5	300.0
H62	C6	C5	H52	186.0	180.0
C5	C6	H62	C7	127.2	120.1
C5	C6	H62	H61	243.6	240.0
C7	C6	H62	H61	116.4	120.0
H62	C6	C7	N8	305.2	300.1
H62	C6	C7	H71	70.5	60.0
H62	C6	C7	H72	180.0	180.0
N8	C7	C6	H61	54.6	60.0
N8	C7	C6	H62	305.2	300.1
C6	C7	N8	H71	125.3	120.0
C6	C7	N8	H72	234.7	239.9
H71	C7	N8	H72	109.5	119.9
C9	N8	C7	HN8	125.3	246.2
C7	N8	C9	NH1	359.9	150.0
C7	N8	C9	NH2	179.2	270.0
C7	N8	C9	H9	301.5	30.0
H71	C7	C6	H61	179.8	180.0
H71	C7	C6	H62	70.5	60.0
C6	C7	H71	N8	236.5	240.0
C6	C7	H71	H72	118.3	120.0
N8	C7	H71	H72	241.8	240.0
H71	C7	N8	C9	60.0	60.0
H71	C7	N8	HN8	294.8	173.8
H72	C7	C6	H61	289.4	299.9
H72	C7	C6	H62	180.0	180.0
C6	C7	H72	N8	123.5	120.1
C6	C7	H72	H71	241.7	240.1
N8	C7	H72	H71	118.2	119.9
H72	C7	N8	C9	310.6	300.1
H72	C7	N8	HN8	185.3	53.9
C9	N8	C7	H71	60.0	60.0
C9	N8	C7	H72	310.6	300.1
C7	N8	C9	HN8	234.7	113.8
NH1	C9	N8	NH2	180.7	239.9
NH1	C9	N8	H9	58.4	120.0
N8	C9	NH1	HH11	180.0	180.0
N8	C9	NH1	HH12	54.8	293.8
NH2	C9	N8	H9	237.8	240.1
N8	C9	NH2	HH21	180.0	299.9
N8	C9	NH2	HH22	54.7	53.7
HN8	N8	C7	H71	294.8	173.8
HN8	N8	C7	H72	185.3	53.9
C7	N8	HN8	C9	136.7	246.1
HN8	N8	C9	NH1	125.2	36.2
HN8	N8	C9	NH2	304.5	156.3
HN8	N8	C9	H9	66.7	276.2
NH1	C9	N8	HN8	125.2	36.2
N8	C9	NH1	NH2	179.3	120.1
N8	C9	NH1	H9	310.2	240.0
NH2	C9	NH1	H9	130.8	119.9
NH1	C9	NH2	HH21	359.3	60.1
NH1	C9	NH2	HH22	234.1	173.8
HH11	NH1	C9	HH12	125.3	246.2
NH2	C9	N8	HN8	304.5	156.3
N8	C9	NH2	NH1	180.6	239.9
N8	C9	NH2	H9	77.3	119.9
NH1	C9	NH2	H9	256.6	240.1
NH2	C9	NH1	HH11	0.7	59.9
NH2	C9	NH1	HH12	235.4	173.7
HH21	NH2	C9	HH22	125.2	246.3
H9	C9	N8	HN8	66.7	276.2
N8	C9	H9	NH1	132.0	120.1
N8	C9	H9	NH2	252.9	240.0
NH1	C9	H9	NH2	121.0	120.0
H9	C9	NH1	HH11	229.9	300.0
H9	C9	NH1	HH12	104.6	53.8
H9	C9	NH2	HH21	102.7	180.0
H9	C9	NH2	HH22	337.5	293.7
HH11	NH1	C9	NH2	0.7	59.9
HH11	NH1	C9	H9	229.9	300.0
C9	NH1	HH11	HH12	234.8	113.8
HH12	NH1	C9	NH2	235.4	173.7
HH12	NH1	C9	H9	104.6	53.8
C9	NH1	HH12	HH11	132.2	246.2
HH21	NH2	C9	H9	102.7	180.0
C9	NH2	HH21	HH22	234.7	113.7
HH22	NH2	C9	H9	337.5	293.7
C9	NH2	HH22	HH21	131.7	246.3