PDB Chemical Component GBQ

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for GBQ

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N29 N30 1.424 1.404
N29 C27 1.439 1.350
N30 C25 1.406 1.352
O28 C27 1.222 1.217
C27 N26 1.429 1.344
C21 C22 1.511 1.531
C21 N20 1.489 1.470
C25 N26 1.383 1.308
C25 C24 1.530 1.507
C22 O23 1.416 1.430
C24 N20 1.460 1.469
O23 C18 1.414 1.430
N20 C19 1.515 1.470
C19 C18 1.606 1.531
C19 C31 1.565 1.507
C18 O17 1.419 1.428
O17 C02 1.436 1.430
C31 C36 1.426 1.383
C31 C32 1.416 1.382
C02 C01 1.553 1.529
C02 C03 1.576 1.507
C36 C35 1.411 1.381
C32 C33 1.412 1.382
C03 C08 1.416 1.382
C03 C04 1.407 1.383
C35 C34 1.407 1.385
C33 C34 1.401 1.384
C08 C07 1.414 1.382
C34 F37 1.367 1.350
C04 C05 1.409 1.382
F12 C09 1.352 1.399
C07 C09 1.543 1.506
C07 C06 1.411 1.382
C09 F10 1.363 1.399
C09 F11 1.359 1.399
C05 C06 1.404 1.382
C05 C13 1.549 1.507
F15 C13 1.358 1.398
C13 F14 1.360 1.399
C13 F16 1.358 1.399
C21 H1 1.100 1.091
C21 H2 1.100 1.089
C22 H3 1.100 1.090
C22 H4 1.100 1.089
C24 H5 1.100 1.090
C24 H6 1.101 1.090
C01 H7 1.100 1.090
C01 H8 1.100 1.091
C01 H9 1.100 1.091
C02 H10 1.101 1.090
C04 H11 1.081 1.080
C06 H12 1.080 1.080
C08 H13 1.080 1.080
C18 H14 1.100 1.091
C19 H15 1.100 1.090
C32 H16 1.080 1.080
C33 H17 1.080 1.080
C35 H18 1.080 1.080
C36 H19 1.080 1.080
N30 H21 1.000 0.970
N29 H22 1.000 0.971

Bond Angles for GBQ

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
N29 N30 H21 126.1 126.7
N30 N29 H22 126.4 126.8
C25 N26 C27 108.3 109.9
C22 C21 N20 111.5 109.3
C21 C22 O23 108.9 109.3
C22 C21 H1 109.0 109.5
C22 C21 H2 108.9 109.5
C21 C22 H3 109.6 109.4
C21 C22 H4 109.6 109.5
C21 N20 C24 104.4 111.0
C21 N20 C19 112.4 110.8
N20 C21 H1 109.0 109.4
N20 C21 H2 109.0 109.6
C25 C24 N20 111.4 109.5
C25 C24 H5 109.0 109.5
C25 C24 H6 109.0 109.4
C22 O23 C18 116.8 113.7
O23 C22 H3 109.6 109.5
O23 C22 H4 109.6 109.5
C24 N20 C19 111.5 111.0
N20 C24 H5 109.0 109.5
N20 C24 H6 109.0 109.5
O23 C18 H14 110.5 109.5
N20 C19 H15 109.2 109.5
C19 C18 O17 110.3 109.5
C19 C18 H14 108.0 109.5
C19 C31 C36 121.4 119.9
C19 C31 C32 122.1 120.0
C31 C19 H15 108.6 109.5
O17 C18 H14 110.4 109.5
O17 C02 H10 110.6 109.5
C32 C31 C36 116.6 120.1
C31 C36 C35 122.3 120.0
C31 C36 H19 118.9 120.0
C31 C32 C33 122.5 120.0
C31 C32 H16 118.8 120.0
C02 C01 H7 109.5 109.5
C02 C01 H8 109.5 109.5
C02 C01 H9 109.5 109.4
C02 C03 C08 120.6 120.0
C02 C03 C04 121.6 120.0
C03 C02 H10 108.7 109.5
C36 C35 H18 120.7 120.0
C32 C33 C34 118.7 120.0
C33 C32 H16 118.8 120.0
C32 C33 H17 120.7 120.0
C04 C03 C08 117.8 120.0
C03 C08 C07 120.9 120.0
C03 C08 H13 119.6 120.0
C03 C04 C05 121.4 120.0
C03 C04 H11 119.3 120.0
C35 C34 F37 119.2 120.0
C33 C34 F37 119.3 120.0
C34 C33 H17 120.7 120.0
C08 C07 C09 120.1 120.0
C04 C05 C06 120.7 120.0
C05 C04 H11 119.3 120.0
C07 C09 F10 117.1 109.5
C07 C09 F11 116.3 109.5
C07 C06 H12 120.7 120.0
F10 C09 F11 101.4 109.5
C05 C06 H12 120.7 120.0
C05 C13 F14 116.5 109.5
C05 C13 F16 116.8 109.5
F15 C13 F16 100.9 109.5
F14 C13 F16 102.0 109.4
H1 C21 H2 109.5 109.5
H3 C22 H4 109.5 109.5
H5 C24 H6 109.5 109.4
H7 C01 H8 109.4 109.5
H7 C01 H9 109.5 109.5
H8 C01 H9 109.5 109.4

Torsion Angles for GBQ

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
N30 C25 C24 H5 3.6 299.8
N30 C25 C24 H6 123.0 59.7
C22 C21 N20 C24 177.9 182.4
C22 C21 N20 C19 56.9 58.5
N20 C21 C22 H1 239.7 240.1
N20 C21 C22 H2 120.3 120.0
C21 C22 O23 C18 58.6 58.6
O23 C22 C21 H3 240.1 240.1
O23 C22 C21 H4 119.9 120.0
H1 C21 C22 H2 240.6 239.9
H3 C22 C21 H4 239.8 239.9
N20 C21 C22 O23 303.6 303.2
C22 C21 N20 H1 120.3 119.9
C22 C21 N20 H2 239.7 240.0
N20 C21 C22 H3 63.5 63.1
N20 C21 C22 H4 183.7 183.2
C25 C24 N20 C21 59.3 66.0
C24 N20 C21 C19 121.0 123.8
C21 N20 C24 H5 299.0 305.9
C21 N20 C24 H6 179.6 186.0
C21 N20 C19 H15 65.6 61.4
H1 C21 N20 H2 119.4 120.1
N26 C25 C24 N20 61.8 0.1
N26 C25 C24 H5 182.0 120.1
N26 C25 C24 H6 301.5 240.0
C21 N20 C24 C25 59.3 66.0
C25 C24 N20 C19 180.9 189.7
N20 C24 C25 H5 239.7 240.0
N20 C24 C25 H6 120.3 120.0
H5 C24 C25 H6 240.6 240.1
O23 C22 C21 N20 303.6 303.2
O23 C22 C21 H1 63.9 63.1
O23 C22 C21 H2 183.3 183.2
C21 C22 O23 H3 119.9 119.9
C21 C22 O23 H4 240.1 240.0
C22 O23 C18 H14 183.8 181.4
H3 C22 O23 H4 120.2 120.1
C21 N20 C24 C19 238.4 236.3
C24 N20 C21 H1 57.6 62.5
C24 N20 C21 H2 298.2 302.4
C25 C24 N20 H5 120.3 120.1
C25 C24 N20 H6 239.7 240.0
C24 N20 C19 H15 308.8 297.5
H5 C24 N20 H6 119.5 119.9
C18 O23 C22 H3 298.7 298.8
C18 O23 C22 H4 178.6 178.6
C19 C18 O23 H14 119.8 119.9
O17 C18 O23 H14 240.0 239.9
C21 N20 C19 C24 116.8 123.8
C19 N20 C21 H1 296.6 298.6
C19 N20 C21 H2 177.2 178.5
C19 N20 C24 H5 60.6 69.6
C19 N20 C24 H6 301.1 309.7
N20 C19 C18 O17 292.0 296.9
N20 C19 C18 H14 171.2 176.8
C31 C19 N20 H15 117.4 120.1
C21 N20 C19 C18 308.4 301.4
C22 O23 C18 C19 303.6 301.3
C24 N20 C19 C18 191.6 177.6
O23 C18 C19 H14 238.7 240.0
O17 C18 C19 H14 120.7 120.1
C21 N20 C19 C31 183.0 181.5
C24 N20 C19 C31 66.2 57.6
N20 C19 C31 H15 242.2 239.9
C31 C19 C18 O17 51.7 56.8
C31 C19 C18 H14 291.0 296.7
C32 C31 C19 C36 179.0 180.3
C19 C31 C36 C35 179.9 179.8
C19 C31 C36 H19 359.9 360.0
C19 C31 C32 C33 180.2 180.0
C19 C31 C32 H16 0.2 359.9
C22 O23 C18 O17 63.8 61.3
O23 C18 O17 H14 120.1 120.1
C19 C18 O17 H14 240.7 239.9
C18 O17 C02 H10 329.7 30.0
O17 C02 C01 H7 180.0 300.0
O17 C02 C01 H8 300.0 60.0
O17 C02 C01 H9 60.0 180.0
C03 C02 O17 H10 121.2 120.0
C19 C31 C36 C32 179.1 180.3
C36 C31 C19 H15 157.5 339.9
C36 C31 C32 C33 359.3 0.2
C36 C31 C32 H16 179.3 180.2
C31 C36 C35 H18 179.3 180.3
C19 C31 C32 C36 180.9 179.7
C32 C31 C19 H15 336.6 160.2
C32 C31 C36 C35 0.9 359.5
C32 C31 C36 H19 180.9 179.7
C31 C32 C33 C34 0.4 0.0
C33 C32 C31 H16 180.0 180.0
C31 C32 C33 H17 180.3 180.0
H7 C01 C02 H8 240.0 240.0
H7 C01 C02 H9 120.0 120.0
H8 C01 C02 H9 240.0 240.0
O17 C02 C03 H10 237.7 240.0
C03 C02 C01 H7 301.5 60.0
C03 C02 C01 H8 61.4 180.0
C03 C02 C01 H9 181.5 300.0
C04 C03 C02 C08 180.5 180.2
C02 C03 C08 C07 180.4 179.7
C02 C03 C08 H13 0.4 359.9
C02 C03 C04 C05 179.5 179.9
C02 C03 C04 H11 359.5 0.0
C31 C36 C35 H19 180.0 180.2
C36 C35 C34 F37 180.3 179.8
C33 C32 C31 C36 359.3 0.2
C31 C32 C33 H16 180.0 180.0
C32 C33 C34 F37 179.9 180.0
C34 C33 C32 H17 180.0 180.0
C02 C03 C08 C04 180.4 180.2
C08 C03 C02 H10 335.9 340.0
C08 C03 C04 C05 359.9 0.1
C08 C03 C04 H11 179.9 180.2
C03 C08 C07 C09 179.9 180.2
C02 C03 C04 C08 179.5 179.8
C04 C03 C02 H10 156.4 160.2
C04 C03 C08 C07 360.0 359.5
C04 C03 C08 H13 180.0 179.7
C03 C04 C05 C06 0.1 0.1
C05 C04 C03 H11 180.0 179.9
C31 C36 C35 C34 359.4 0.5
C33 C34 C35 F37 180.0 180.0
C35 C34 C33 H17 179.9 180.0
C34 C33 C32 H16 180.4 180.0
C32 C33 C34 H17 180.0 180.0
C35 C34 C33 F37 180.0 180.0
C03 C08 C07 H13 180.0 180.2
C08 C07 C09 F10 292.2 180.3
C08 C07 C09 F11 172.1 300.3
C08 C07 C06 H12 179.8 179.7
F37 C34 C33 H17 359.9 0.0
C05 C04 C03 C08 359.9 0.1
C03 C04 C05 H11 180.0 180.1
C04 C05 C06 H12 180.1 179.9
C04 C05 C13 F14 256.2 90.0
C04 C05 C13 F16 135.3 330.1
C09 C07 C06 H12 0.0 0.1
F10 C09 C07 F11 120.1 240.0
C03 C08 C07 C06 0.1 0.6
C05 C06 C07 H12 180.0 179.9
C07 C09 F10 F11 232.3 120.1
C07 C09 F11 F10 128.2 239.9
C06 C05 C04 H11 180.1 180.0
C07 C06 C05 H12 180.0 180.1
C06 C05 C13 F14 76.2 269.9
C06 C05 C13 F16 315.3 150.0
F15 C13 C05 F16 240.7 240.0
F14 C13 C05 F16 120.9 119.9
C05 C13 F15 F16 127.6 120.0
F14 C13 F15 F16 255.2 240.0
C05 C13 F14 F16 231.6 240.0
F15 C13 F14 F16 104.0 120.0
C05 C13 F16 F14 128.2 119.9
C22 C21 H1 N20 238.1 240.2
H1 C21 C22 O23 63.9 63.1
C22 C21 H1 H2 119.0 120.1
H1 C21 C22 H3 183.8 183.0
H1 C21 C22 H4 304.0 303.1
H1 C21 N20 C24 57.6 62.5
H1 C21 N20 C19 296.6 298.6
N20 C21 H1 H2 240.9 239.9
C22 C21 H2 N20 121.9 119.9
H2 C21 C22 O23 183.3 183.2
C22 C21 H2 H1 241.0 239.9
H2 C21 C22 H3 303.2 303.1
H2 C21 C22 H4 63.4 63.2
H2 C21 N20 C24 298.2 302.4
H2 C21 N20 C19 177.2 178.5
N20 C21 H2 H1 119.1 120.0
H3 C22 C21 N20 63.5 63.1
C21 C22 H3 O23 240.5 240.2
H3 C22 C21 H1 183.8 183.0
H3 C22 C21 H2 303.2 303.1
C21 C22 H3 H4 120.3 120.1
H3 C22 O23 C18 298.7 298.8
O23 C22 H3 H4 239.8 239.9
H4 C22 C21 N20 183.7 183.2
C21 C22 H4 O23 119.5 119.9
H4 C22 C21 H1 304.0 303.1
H4 C22 C21 H2 63.4 63.2
C21 C22 H4 H3 239.7 239.9
H4 C22 O23 C18 178.6 178.6
O23 C22 H4 H3 120.2 120.1
C25 C24 H5 N20 238.3 239.9
C25 C24 H5 H6 119.1 120.0
H5 C24 N20 C19 60.6 69.6
N20 C24 H5 H6 240.9 240.0
C25 C24 H6 N20 121.8 120.0
C25 C24 H6 H5 240.9 240.0
H6 C24 N20 C19 301.1 309.7
N20 C24 H6 H5 119.1 120.0
C02 C01 H7 H8 120.0 120.1
C02 C01 H7 H9 240.0 240.0
H8 C01 H7 H9 120.0 120.0
C02 C01 H8 H7 240.0 239.9
C02 C01 H8 H9 120.0 120.0
H7 C01 H8 H9 240.0 240.0
C02 C01 H9 H7 120.0 120.0
C02 C01 H9 H8 240.0 240.0
H7 C01 H9 H8 120.0 120.0
H10 C02 C01 H7 60.1 180.0
H10 C02 C01 H8 180.1 300.0
H10 C02 C01 H9 300.1 60.0
H10 C02 C03 C08 335.9 340.0
H10 C02 C03 C04 156.4 160.2
H11 C04 C03 C08 179.9 180.2
C03 C04 H11 C05 180.0 179.9
H11 C04 C05 C06 180.1 180.0
C03 C08 H13 C07 180.0 179.8
H13 C08 C07 C09 359.9 0.0
C19 C18 H14 O17 120.7 120.1
H15 C19 C18 O17 174.1 176.9
H15 C19 C18 H14 53.3 56.9
H15 C19 C31 C36 157.5 339.9
H15 C19 C31 C32 336.6 160.2
H16 C32 C31 C36 179.3 180.2
C31 C32 H16 C33 180.0 180.0
H16 C32 C33 C34 180.4 180.0
H16 C32 C33 H17 0.3 360.0
C32 C33 H17 C34 180.0 180.0
H17 C33 C32 H16 0.3 360.0
H17 C33 C34 F37 359.9 0.0
H18 C35 C34 F37 0.3 360.0
C31 C36 H19 C35 180.0 179.8
H19 C36 C35 H18 359.3 0.1
H21 N30 N29 H22 359.8 0.3
H22 N29 N30 H21 359.8 0.3