PDB Chemical Component GBL

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for GBL

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
CA C 1.494 1.513
CA CB 1.541 1.545
CA HAC1 1.100 1.090
CA HAC2 1.100 1.091
C O 1.226 1.208
C OD 1.375 1.340
CB CG 1.513 1.545
CB HBC1 1.100 1.090
CB HBC2 1.100 1.090
CG OD 1.460 1.461
CG HGC1 1.099 1.090
CG HGC2 1.100 1.089

Bond Angles for GBL

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C CA CB 102.1 104.8
C CA HAC1 113.5 110.4
C CA HAC2 112.0 110.4
CA C O 123.3 125.1
CA C OD 113.1 109.8
CB CA HAC1 113.6 110.4
CB CA HAC2 112.0 110.4
CA CB CG 105.0 102.2
CA CB HBC1 111.9 110.9
CA CB HBC2 111.0 110.9
HAC1 CA HAC2 104.0 110.4
O C OD 123.6 125.1
C OD CG 108.2 109.8
CG CB HBC1 111.9 110.9
CG CB HBC2 111.0 110.9
CB CG OD 106.2 104.3
CB CG HGC1 111.3 110.4
CB CG HGC2 110.5 110.5
HBC1 CB HBC2 106.1 110.9
OD CG HGC1 111.3 110.7
OD CG HGC2 110.6 110.3
HGC1 CG HGC2 107.0 110.5

Torsion Angles for GBL

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
CB CA C HAC1 122.6 241.2
CB CA C HAC2 240.0 118.9
C CA CB CG 19.1 15.3
C CA CB HBC1 257.5 133.6
C CA CB HBC2 139.2 257.2
HAC1 CA C HAC2 117.4 237.7
O C CA OD 179.4 179.7
CA C OD CG 354.0 338.7
C CA CB HAC1 237.4 118.8
C CA CB HAC2 120.0 241.2
CB CA C O 170.7 182.3
CB CA C OD 351.3 2.6
HAC1 CA CB HAC2 242.6 122.3
CG CB CA HBC1 121.6 241.8
CG CB CA HBC2 240.0 118.2
CA CB CG OD 336.6 333.0
CA CB CG HGC1 215.3 91.9
CA CB CG HGC2 96.6 214.4
HBC1 CB CA HBC2 118.3 236.4
C CA HAC1 CB 116.0 244.6
C CA HAC1 HAC2 238.0 122.3
HAC1 CA C O 48.1 301.2
HAC1 CA C OD 228.7 121.5
CB CA HAC1 HAC2 122.0 237.7
HAC1 CA CB CG 141.7 256.5
HAC1 CA CB HBC1 20.1 14.7
HAC1 CA CB HBC2 261.8 138.3
C CA HAC2 CB 246.0 115.4
C CA HAC2 HAC1 123.0 237.7
HAC2 CA C O 290.7 63.5
HAC2 CA C OD 111.3 243.8
CB CA HAC2 HAC1 237.0 122.3
HAC2 CA CB CG 259.1 134.2
HAC2 CA CB HBC1 137.5 252.4
HAC2 CA CB HBC2 19.2 16.0
O C CA CB 170.7 182.3
O C CA HAC1 48.1 301.2
O C CA HAC2 290.7 63.5
CA C O OD 180.7 180.3
O C OD CG 174.6 159.0
OD C CA CB 351.3 2.6
OD C CA HAC1 228.7 121.5
OD C CA HAC2 111.3 243.8
CA C OD O 179.4 179.7
CB CG OD C 18.5 31.0
C OD CG HGC1 139.8 272.2
C OD CG HGC2 258.5 149.6
CG CB CA HAC1 141.7 256.5
CG CB CA HAC2 259.1 134.2
CA CB CG HBC1 238.3 118.2
CA CB CG HBC2 120.0 241.8
C OD CG CB 18.5 31.0
HBC1 CB CG HBC2 241.7 123.6
OD CG CB HGC1 121.2 241.1
OD CG CB HGC2 240.0 118.5
HGC1 CG CB HGC2 118.7 237.4
HBC1 CB CA HAC1 20.1 14.7
HBC1 CB CA HAC2 137.5 252.4
CA CB HBC1 CG 117.6 247.2
CA CB HBC1 HBC2 238.8 123.6
CG CB HBC1 HBC2 121.2 236.4
HBC1 CB CG OD 98.2 214.8
HBC1 CB CG HGC1 337.0 333.7
HBC1 CB CG HGC2 218.3 96.2
HBC2 CB CA HAC1 261.8 138.3
HBC2 CB CA HAC2 19.2 16.0
CA CB HBC2 CG 243.6 112.7
CA CB HBC2 HBC1 121.8 236.4
CG CB HBC2 HBC1 238.2 123.6
HBC2 CB CG OD 216.5 91.1
HBC2 CB CG HGC1 95.3 210.0
HBC2 CB CG HGC2 336.6 332.6
OD CG CB HBC1 98.2 214.8
OD CG CB HBC2 216.5 91.1
CB CG OD HGC1 238.8 118.8
CB CG OD HGC2 120.0 241.4
HGC1 CG OD HGC2 241.2 122.6
HGC1 CG CB HBC1 337.0 333.7
HGC1 CG CB HBC2 95.3 210.0
CB CG HGC1 OD 118.3 245.0
CB CG HGC1 HGC2 239.2 122.5
OD CG HGC1 HGC2 120.9 237.5
HGC2 CG CB HBC1 218.3 96.2
HGC2 CG CB HBC2 336.6 332.6
CB CG HGC2 OD 242.6 114.8
CB CG HGC2 HGC1 121.3 237.5
OD CG HGC2 HGC1 238.7 122.7