PDB Chemical Component GAG

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for GAG

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O20 C2 1.287 1.356
O20 H20 0.950 0.966
C2 C1 1.483 1.474
C2 N3 1.339 1.305
C1 COO 1.479 1.471
C1 C5 1.388 1.374
COO O12 1.219 1.347
COO O11 1.218 1.216
O12 H12 0.950 0.967
C5 O4 1.382 1.335
C5 H5 1.103 1.080
O4 N3 1.392 1.207

Bond Angles for GAG

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 O20 H20 126.0 106.8
O20 C2 C1 126.0 127.4
O20 C2 N3 125.7 127.4
C1 C2 N3 108.3 105.2
C2 C1 COO 127.6 128.7
C2 C1 C5 105.2 102.8
C2 N3 O4 108.5 112.2
COO C1 C5 127.2 128.5
C1 COO O12 122.1 120.1
C1 COO O11 116.3 119.9
C1 C5 O4 108.4 106.4
C1 C5 H5 126.0 126.8
O12 COO O11 121.6 120.0
COO O12 H12 122.1 120.0
O4 C5 H5 125.6 126.8
C5 O4 N3 109.6 113.3

Torsion Angles for GAG

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C1 C2 O20 N3 180.0 179.4
O20 C2 C1 COO 0.3 0.3
O20 C2 C1 C5 180.2 180.1
O20 C2 N3 O4 180.8 179.9
H20 O20 C2 C1 179.9 269.5
H20 O20 C2 N3 360.0 90.0
C1 C2 O20 H20 179.9 269.5
O20 C2 C1 N3 180.0 180.5
C1 C2 N3 O4 0.9 0.4
COO C1 C2 C5 180.1 180.2
C2 C1 COO O12 346.3 179.7
C2 C1 COO O11 167.0 359.8
C2 C1 C5 O4 358.9 0.2
C2 C1 C5 H5 178.9 180.3
N3 C2 O20 H20 360.0 90.0
O20 C2 N3 C1 180.0 179.5
N3 C2 C1 COO 180.2 179.8
N3 C2 C1 C5 0.1 359.7
C5 O4 N3 C2 358.4 359.7
COO C1 C2 N3 180.2 179.8
C2 C1 COO C5 179.9 179.8
COO C1 C5 O4 178.8 180.0
COO C1 C5 H5 358.8 0.1
O12 COO C1 O11 179.3 179.9
C1 COO O12 H12 180.1 180.0
C5 C1 C2 N3 0.1 359.7
C2 C1 C5 COO 180.1 180.2
C5 C1 COO O12 166.4 359.9
C5 C1 COO O11 347.1 180.0
O4 C5 C1 H5 180.0 179.9
C1 C5 O4 N3 1.7 0.1
O12 COO C1 C5 166.4 359.9
C1 COO O12 O11 180.7 180.1
O11 COO C1 C5 347.1 180.0
C1 COO O11 O12 179.3 179.9
O11 COO O12 H12 359.3 359.9
H12 O12 COO O11 359.3 359.9
C2 N3 O4 C5 358.4 359.7
C1 C5 O4 H5 180.0 180.1
C1 C5 H5 O4 180.0 179.9
H5 C5 O4 N3 181.7 180.0
N3 O4 C5 H5 181.7 180.0