PDB Chemical Component GAD

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for GAD

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.537	1.535
C1	O5	1.448	1.423
C1	H11	1.115	1.089
C1	H12	1.114	1.090
C2	O2	1.407	1.429
C2	C3	1.529	1.535
C2	H2	1.116	1.090
O2	HO2	0.950	0.967
C3	O3	1.441	1.428
C3	C4	1.561	1.507
C3	H3	1.115	1.089
O3	HO3	0.950	0.966
C4	C5	1.338	1.319
C4	H4	1.103	1.081
C5	C6	1.538	1.473
C5	O5	1.440	1.344
C6	O6A	1.280	1.214
C6	O6B	1.261	1.346
O6B	HO6B	0.949	0.967

Bond Angles for GAD

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	O5	100.9	109.2
C2	C1	H11	115.5	109.5
C2	C1	H12	115.5	109.5
C1	C2	O2	112.0	109.9
C1	C2	C3	110.9	107.5
C1	C2	H2	105.7	109.8
O5	C1	H11	115.5	109.5
O5	C1	H12	115.5	109.5
C1	O5	C5	111.1	110.2
H11	C1	H12	95.0	109.6
O2	C2	C3	105.7	109.9
O2	C2	H2	110.8	109.9
C2	O2	HO2	112.0	106.8
C3	C2	H2	111.9	109.9
C2	C3	O3	110.3	109.9
C2	C3	C4	112.8	108.1
C2	C3	H3	109.6	109.6
O3	C3	C4	117.0	109.8
O3	C3	H3	104.6	109.7
C3	O3	HO3	110.3	106.8
C4	C3	H3	101.7	109.8
C3	C4	C5	119.4	122.4
C3	C4	H4	127.7	118.8
C5	C4	H4	112.8	118.8
C4	C5	C6	128.6	116.8
C4	C5	O5	114.2	126.4
C6	C5	O5	117.1	116.8
C5	C6	O6A	124.0	119.9
C5	C6	O6B	110.4	120.0
O6A	C6	O6B	125.6	120.0
C6	O6B	HO6B	110.4	120.1

Torsion Angles for GAD

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O5	C1	C2	H11	234.7	240.1
O5	C1	C2	H12	125.3	119.9
C2	C1	O5	C5	281.0	303.0
H11	C1	C2	H12	250.6	239.8
O2	C2	C1	C3	117.8	119.5
O2	C2	C1	H2	239.3	239.0
C1	C2	O2	HO2	180.0	60.9
C3	C2	C1	H2	121.5	119.5
C1	C2	C3	O3	219.2	197.6
C1	C2	C3	C4	352.0	317.4
C1	C2	C3	H3	104.5	77.0
C2	C1	O5	H11	125.2	119.9
C2	C1	O5	H12	234.7	240.1
O5	C1	C2	O2	174.2	188.2
O5	C1	C2	C3	56.4	68.6
O5	C1	C2	H2	294.9	309.1
H11	C1	O5	H12	109.5	120.2
C4	C5	O5	C1	43.8	23.8
C6	C5	O5	C1	227.0	203.9
C2	C1	H11	O5	242.7	240.3
C2	C1	H11	H12	121.3	120.1
H11	C1	C2	O2	299.5	308.1
H11	C1	C2	C3	181.7	188.5
H11	C1	C2	H2	60.2	69.0
O5	C1	H11	H12	238.6	239.9
H11	C1	O5	C5	155.7	183.1
C2	C1	H12	O5	117.4	119.7
C2	C1	H12	H11	238.7	239.8
H12	C1	C2	O2	48.9	68.3
H12	C1	C2	C3	291.1	308.7
H12	C1	C2	H2	169.6	189.2
O5	C1	H12	H11	121.3	120.1
H12	C1	O5	C5	46.2	62.9
O2	C2	C1	O5	174.2	188.2
O2	C2	C1	H11	299.5	308.1
O2	C2	C1	H12	48.9	68.3
C1	C2	O2	C3	239.1	242.0
C1	C2	O2	H2	117.7	121.0
C3	C2	O2	H2	238.5	239.0
O2	C2	C3	O3	97.6	78.1
O2	C2	C3	C4	230.4	197.8
O2	C2	C3	H3	342.9	317.4
C3	C2	C1	O5	56.4	68.6
C3	C2	C1	H11	181.7	188.5
C3	C2	C1	H12	291.1	308.7
C1	C2	C3	O2	121.5	119.5
C1	C2	C3	H2	242.3	240.5
O2	C2	C3	H2	120.7	121.0
C3	C2	O2	HO2	300.8	178.9
O3	C3	C2	C4	227.2	240.2
O3	C3	C2	H3	114.7	120.6
C2	C3	O3	HO3	180.0	178.8
C4	C3	C2	H3	247.5	240.4
C2	C3	C4	C5	330.0	11.8
C2	C3	C4	H4	150.0	192.0
H2	C2	C1	O5	294.9	309.1
H2	C2	C1	H11	60.2	69.0
H2	C2	C1	H12	169.6	189.2
C1	C2	H2	O2	238.5	239.0
C1	C2	H2	C3	120.8	118.0
O2	C2	H2	C3	242.3	239.0
H2	C2	O2	HO2	62.3	299.9
H2	C2	C3	O3	336.9	317.1
H2	C2	C3	C4	109.7	76.9
H2	C2	C3	H3	222.2	196.5
HO2	O2	C2	C3	300.8	178.9
HO2	O2	C2	H2	62.3	299.9
O3	C3	C2	H2	336.9	317.1
C2	C3	O3	C4	130.6	118.7
C2	C3	O3	H3	242.2	239.5
C4	C3	O3	H3	111.6	120.7
O3	C3	C4	C5	99.4	131.7
O3	C3	C4	H4	279.4	311.8
C4	C3	C2	H2	109.7	76.9
C2	C3	C4	O3	230.5	240.1
C2	C3	C4	H3	117.3	119.5
O3	C3	C4	H3	246.8	239.3
C4	C3	O3	HO3	49.4	60.0
C5	C4	C3	H4	180.0	179.9
C3	C4	C5	C6	189.5	179.3
C3	C4	C5	O5	13.1	359.3
H3	C3	C2	H2	222.2	196.5
C2	C3	H3	O3	118.3	120.7
C2	C3	H3	C4	240.4	241.4
O3	C3	H3	C4	122.2	120.7
H3	C3	O3	HO3	297.8	299.3
H3	C3	C4	C5	212.7	252.3
H3	C3	C4	H4	32.7	72.5
HO3	O3	C3	C4	49.4	60.0
HO3	O3	C3	H3	297.8	299.3
C1	O5	C5	C4	43.8	23.8
C5	C4	C3	H3	212.7	252.3
C3	C4	C5	H4	180.0	180.1
C6	C5	C4	O5	176.3	179.9
C4	C5	C6	O6A	356.6	0.0
C4	C5	C6	O6B	175.2	180.0
H4	C4	C3	H3	32.7	72.5
C3	C4	H4	C5	180.0	179.9
H4	C4	C5	C6	9.5	359.1
H4	C4	C5	O5	193.1	179.2
C1	O5	C5	C6	227.0	203.9
C6	C5	C4	H4	9.5	359.1
C4	C5	C6	O5	183.7	180.0
O6A	C6	C5	O6B	181.5	180.0
C5	C6	O6B	HO6B	180.0	180.0
C5	O5	C1	H11	155.7	183.1
C5	O5	C1	H12	46.2	62.9
O5	C5	C4	H4	193.1	179.2
C4	C5	O5	C6	176.8	179.9
O5	C5	C6	O6A	172.9	180.0
O5	C5	C6	O6B	351.4	360.0
O6A	C6	C5	O5	172.9	180.0
C5	C6	O6A	O6B	178.3	180.0
O6A	C6	O6B	HO6B	358.5	360.0
O6B	C6	C5	O5	351.4	360.0
C5	C6	O6B	O6A	181.5	180.0