PDB Chemical Component GAB

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for GAB

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1' O1' 1.248 1.215
C1' O2' 1.330 1.347
C1' C1 1.459 1.477
O2' HO2' 0.950 0.967
C1 C2 1.523 1.394
C1 C6 1.361 1.396
C2 C3 1.479 1.387
C2 H2 1.080 1.080
C3 C4 1.430 1.389
C3 N3 1.329 1.397
C4 C5 1.367 1.382
C4 H4 1.080 1.081
C5 C6 1.457 1.379
C5 H5 1.080 1.080
C6 H6 1.080 1.080
N3 HN31 1.000 0.970
N3 HN32 1.000 0.970

Bond Angles for GAB

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O1' C1' O2' 105.9 119.9
O1' C1' C1 130.4 120.0
O2' C1' C1 123.6 120.1
C1' O2' HO2' 109.5 120.0
C1' C1 C2 119.7 120.1
C1' C1 C6 120.0 120.1
C2 C1 C6 120.2 119.8
C1 C2 C3 114.8 119.8
C1 C2 H2 122.6 120.1
C1 C6 C5 120.7 120.0
C1 C6 H6 119.6 120.0
C3 C2 H2 122.6 120.1
C2 C3 C4 121.3 120.0
C2 C3 N3 118.1 120.0
C4 C3 N3 120.5 120.0
C3 C4 C5 119.8 120.3
C3 C4 H4 120.1 119.9
C3 N3 HN31 109.5 120.0
C3 N3 HN32 109.5 120.0
C5 C4 H4 120.1 119.8
C4 C5 C6 121.8 120.2
C4 C5 H5 119.1 119.9
C6 C5 H5 119.1 119.9
C5 C6 H6 119.6 120.0
HN31 N3 HN32 109.5 119.9

Torsion Angles for GAB

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O2' C1' O1' C1 182.6 180.0
O1' C1' O2' HO2' 360.0 -0.0
O1' C1' C1 C2 358.3 0.2
O1' C1' C1 C6 180.3 180.0
O1' C1' O2' C1 177.6 180.0
O2' C1' C1 C2 175.3 180.2
O2' C1' C1 C6 357.2 360.0
O1' C1' C1 O2' 183.1 180.0
C1 C1' O2' HO2' 182.4 180.0
C2 C1 C1' C6 178.0 180.2
C1' C1 C2 C3 168.9 180.2
C1' C1 C2 H2 348.9 359.8
C1' C1 C6 C5 186.2 180.0
C1' C1 C6 H6 6.2 360.0
HO2' O2' C1' C1 182.4 180.0
C1' C1 C2 C6 182.0 179.8
C2 C1 C6 C5 8.2 359.8
C2 C1 C6 H6 188.2 179.8
C3 C2 C1 H2 180.0 180.4
C1 C2 C3 C4 9.0 359.6
C1 C2 C3 N3 185.2 179.8
C1' C1 C6 C2 178.0 180.2
C6 C1 C2 C3 346.9 0.4
C6 C1 C2 H2 166.9 180.0
C4 C5 C6 C1 1.6 -0.0
C1 C6 C5 H5 181.6 180.0
C5 C6 C1 H6 180.0 180.0
C3 C2 C1 C6 346.9 0.4
C1 C2 C3 H2 180.0 179.6
C4 C3 C2 N3 183.7 179.9
C2 C3 C4 C5 0.0 0.2
C2 C3 C4 H4 180.0 180.2
C2 C3 N3 HN31 294.0 179.7
C2 C3 N3 HN32 54.0 359.6
H2 C2 C1 C6 166.9 180.0
C1 C2 H2 C3 180.0 180.4
H2 C2 C3 C4 189.0 180.0
H2 C2 C3 N3 5.3 0.1
C4 C3 C2 H2 189.0 180.0
C2 C3 C4 N3 176.2 180.1
C4 C3 N3 HN31 110.3 359.9
C4 C3 N3 HN32 230.3 179.7
C5 C4 C3 H4 180.0 180.0
C3 C4 C5 C6 354.1 360.0
C3 C4 C5 H5 174.1 180.0
N3 C3 C2 H2 5.3 0.1
C2 C3 N3 C4 183.7 179.9
N3 C3 C4 C5 183.8 180.0
N3 C3 C4 H4 3.8 0.0
HN31 N3 C3 HN32 240.0 180.2
C1 C6 C5 C4 1.6 -0.0
C5 C4 C3 N3 183.8 180.0
C3 C4 C5 H4 180.0 180.0
C6 C5 C4 H5 180.0 180.0
C4 C5 C6 H6 181.6 180.0
H4 C4 C3 N3 3.8 0.0
C3 C4 H4 C5 180.0 180.0
H4 C4 C5 C6 174.1 180.0
H4 C4 C5 H5 354.1 360.0
C1 C6 C5 H6 180.0 180.0
C6 C5 C4 H4 174.1 180.0
C4 C5 C6 H5 180.0 180.0
H5 C5 C4 H4 354.1 360.0
C4 C5 H5 C6 180.0 180.0
H5 C5 C6 H6 1.7 -0.0
C1 C6 H6 C5 180.0 180.0
H6 C6 C5 H5 1.7 -0.0
C3 N3 HN31 HN32 120.0 179.8
C3 N3 HN32 HN31 240.0 180.2