PDB Chemical Component GAA

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for GAA

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.511	1.531
C1	O1	1.425	1.429
C1	O5	1.408	1.426
C1	H1	1.114	1.091
C2	C3	1.585	1.533
C2	O2	1.397	1.428
C2	H2	1.114	1.090
C3	C4	1.527	1.532
C3	O3	1.432	1.429
C3	H3	1.116	1.091
C4	C5	1.511	1.531
C4	O4	1.420	1.429
C4	H4	1.116	1.090
C5	C6	1.510	1.531
C5	O5	1.430	1.426
C5	H5	1.115	1.090
C6	O6	1.442	1.430
C6	H61	1.115	1.090
C6	H62	1.115	1.089
C7	C8	1.380	1.387
C7	C12	1.395	1.387
C7	O1	1.448	1.359
C8	C9	1.399	1.381
C8	H8	1.103	1.081
C9	C10	1.420	1.382
C9	N1	1.464	1.480
C10	C11	1.407	1.383
C10	H10	1.103	1.080
C11	C12	1.402	1.382
C11	H11	1.102	1.080
C12	H12	1.103	1.080
N1	O7	1.249	1.219
N1	O8	1.257	1.218
O2	HO2	0.950	0.968
O3	HO3	0.951	0.968
O4	HO4	0.949	0.967
O6	HO6	0.950	0.967

Bond Angles for GAA

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	O1	113.1	109.4
C2	C1	O5	106.7	109.8
C2	C1	H1	110.3	109.4
C1	C2	C3	105.9	109.0
C1	C2	O2	109.0	109.5
C1	C2	H2	114.9	109.5
O1	C1	O5	113.2	109.5
O1	C1	H1	103.3	109.4
C1	O1	C7	115.5	106.8
O5	C1	H1	110.2	109.4
C1	O5	C5	113.2	107.6
C3	C2	O2	116.5	109.7
C3	C2	H2	107.1	109.5
C2	C3	C4	106.3	108.7
C2	C3	O3	117.9	109.6
C2	C3	H3	105.9	109.6
O2	C2	H2	103.8	109.6
C2	O2	HO2	109.0	106.8
C4	C3	O3	109.3	109.7
C4	C3	H3	115.1	109.7
C3	C4	C5	107.2	109.0
C3	C4	O4	109.4	109.6
C3	C4	H4	111.7	109.6
O3	C3	H3	102.7	109.6
C3	O3	HO3	117.9	106.8
C5	C4	O4	111.5	109.7
C5	C4	H4	109.6	109.4
C4	C5	C6	115.3	109.4
C4	C5	O5	110.1	109.8
C4	C5	H5	104.2	109.4
O4	C4	H4	107.5	109.6
C4	O4	HO4	109.4	106.8
C6	C5	O5	107.0	109.4
C6	C5	H5	107.5	109.4
C5	C6	O6	108.8	109.4
C5	C6	H61	112.4	109.4
C5	C6	H62	112.5	109.5
O5	C5	H5	112.9	109.5
O6	C6	H61	112.4	109.5
O6	C6	H62	112.5	109.5
C6	O6	HO6	108.8	106.8
H61	C6	H62	98.0	109.5
C8	C7	C12	124.7	119.9
C8	C7	O1	116.9	120.1
C7	C8	C9	118.5	120.0
C7	C8	H8	120.1	120.0
C12	C7	O1	118.5	120.0
C7	C12	C11	117.2	119.9
C7	C12	H12	121.1	120.1
C9	C8	H8	121.4	120.0
C8	C9	C10	118.6	120.1
C8	C9	N1	119.9	120.0
C10	C9	N1	121.5	119.9
C9	C10	C11	121.4	120.1
C9	C10	H10	119.7	120.0
C9	N1	O7	121.9	120.0
C9	N1	O8	121.5	120.0
C11	C10	H10	118.9	119.9
C10	C11	C12	119.7	120.0
C10	C11	H11	120.3	120.0
C12	C11	H11	120.0	120.0
C11	C12	H12	121.7	120.0
O7	N1	O8	116.6	120.0

Torsion Angles for GAA

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O1	C1	C2	O5	234.9	239.9
O1	C1	C2	H1	115.2	119.8
C2	C1	O1	C7	185.7	186.1
O5	C1	C2	H1	240.3	239.9
C2	C1	O5	C5	293.9	292.4
C3	C2	C1	O2	233.9	240.0
C3	C2	C1	H2	117.9	119.8
C1	C2	C3	C4	295.9	306.3
C1	C2	C3	O3	172.9	186.4
C1	C2	C3	H3	58.7	66.1
O2	C2	C1	H2	244.0	239.8
C1	C2	O2	HO2	180.0	60.0
C2	C1	O1	O5	121.5	120.3
C2	C1	O1	H1	240.8	240.2
O1	C1	C2	C3	299.8	301.1
O1	C1	C2	O2	65.9	61.1
O1	C1	C2	H2	181.9	181.3
O5	C1	O1	H1	119.2	119.9
O1	C1	O5	C5	59.0	52.4
C8	C7	O1	C1	275.9	185.4
C12	C7	O1	C1	95.9	5.7
C2	C1	O5	O1	234.9	239.9
C2	C1	O5	H1	119.7	120.0
O5	C1	C2	C3	65.0	61.2
O5	C1	C2	O2	191.0	181.2
O5	C1	C2	H2	307.1	301.5
O1	C1	O5	H1	244.8	240.1
O5	C1	O1	C7	64.2	65.7
C4	C5	O5	C1	63.1	67.7
C6	C5	O5	C1	189.0	187.7
C1	O5	C5	H5	307.1	307.5
C2	C1	H1	O1	121.2	119.8
C2	C1	H1	O5	242.5	239.7
H1	C1	C2	C3	184.7	181.3
H1	C1	C2	O2	310.7	301.3
H1	C1	C2	H2	66.8	61.5
O1	C1	H1	O5	121.3	119.9
H1	C1	O1	C7	305.0	305.8
H1	C1	O5	C5	174.2	172.3
C3	C2	C1	O1	299.8	301.1
C3	C2	C1	O5	65.0	61.2
C3	C2	C1	H1	184.7	181.3
C1	C2	C3	O2	121.3	119.9
C1	C2	C3	H2	237.0	240.2
O2	C2	C3	H2	115.6	120.3
C3	C2	O2	HO2	299.7	179.6
C4	C3	C2	O3	123.0	119.9
C4	C3	C2	H3	237.2	240.2
C2	C3	C4	C5	60.1	53.8
C2	C3	C4	O4	299.1	293.8
C2	C3	C4	H4	180.2	173.5
O3	C3	C2	H3	114.2	120.3
C2	C3	O3	HO3	180.1	300.0
O2	C2	C1	O1	65.9	61.1
O2	C2	C1	O5	191.0	181.2
O2	C2	C1	H1	310.7	301.3
C1	C2	O2	C3	240.3	240.4
C1	C2	O2	H2	122.9	120.2
C3	C2	O2	H2	242.6	239.8
O2	C2	C3	C4	174.5	186.4
O2	C2	C3	O3	51.5	66.4
O2	C2	C3	H3	297.4	306.2
H2	C2	C1	O1	181.9	181.3
H2	C2	C1	O5	307.1	301.5
H2	C2	C1	H1	66.8	61.5
C1	C2	H2	C3	117.2	119.5
C1	C2	H2	O2	241.0	239.8
C3	C2	H2	O2	123.8	120.3
H2	C2	C3	C4	58.9	66.1
H2	C2	C3	O3	295.9	306.1
H2	C2	C3	H3	181.7	185.9
H2	C2	O2	HO2	57.1	299.8
C4	C3	C2	O2	174.5	186.4
C4	C3	C2	H2	58.9	66.1
C2	C3	C4	O3	231.7	240.2
C2	C3	C4	H3	116.9	119.8
O3	C3	C4	H3	245.1	239.6
C4	C3	O3	HO3	58.6	180.8
C5	C4	C3	O4	121.0	120.0
C5	C4	C3	H4	239.9	240.3
C3	C4	C5	C6	180.1	178.6
C3	C4	C5	O5	301.3	298.6
C3	C4	C5	H5	62.6	58.8
O4	C4	C3	H4	118.9	120.3
C3	C4	O4	HO4	180.0	300.0
O3	C3	C2	O2	51.5	66.4
O3	C3	C2	H2	295.9	306.1
C2	C3	O3	C4	121.5	119.3
C2	C3	O3	H3	244.1	239.7
C4	C3	O3	H3	122.6	120.5
O3	C3	C4	C5	188.4	173.6
O3	C3	C4	O4	67.4	53.6
O3	C3	C4	H4	308.5	293.4
H3	C3	C2	O2	297.4	306.2
H3	C3	C2	H2	181.7	185.9
C2	C3	H3	C4	242.9	240.8
C2	C3	H3	O3	124.3	120.3
C4	C3	H3	O3	241.4	239.5
H3	C3	C4	C5	303.2	294.0
H3	C3	C4	O4	182.2	174.0
H3	C3	C4	H4	63.4	53.8
H3	C3	O3	HO3	296.0	60.3
C1	O5	C5	C4	63.1	67.7
C5	C4	C3	O3	188.4	173.6
C5	C4	C3	H3	303.2	294.0
C3	C4	C5	O4	240.3	240.1
C3	C4	C5	H4	121.4	119.8
O4	C4	C5	H4	241.1	239.8
C5	C4	O4	HO4	61.6	180.4
C6	C5	C4	O5	238.8	239.9
C6	C5	C4	H5	117.5	119.8
C4	C5	C6	O6	182.5	185.2
C4	C5	C6	H61	307.7	65.2
C4	C5	C6	H62	57.2	305.2
O5	C5	C4	H5	238.7	239.9
O4	C4	C3	O3	67.4	53.6
O4	C4	C3	H3	182.2	174.0
C3	C4	O4	C5	118.4	119.6
C3	C4	O4	H4	238.6	239.7
C5	C4	O4	H4	120.2	120.1
O4	C4	C5	C6	299.9	298.5
O4	C4	C5	O5	61.0	58.6
O4	C4	C5	H5	182.4	178.7
H4	C4	C3	O3	308.5	293.4
H4	C4	C3	H3	63.4	53.8
C3	C4	H4	C5	241.3	240.5
C3	C4	H4	O4	120.0	120.3
C5	C4	H4	O4	238.7	239.7
H4	C4	C5	C6	58.7	58.7
H4	C4	C5	O5	179.9	178.8
H4	C4	C5	H5	301.2	298.9
H4	C4	O4	HO4	301.5	60.3
C1	O5	C5	C6	189.0	187.7
C6	C5	C4	O4	299.9	298.5
C6	C5	C4	H4	58.7	58.7
C4	C5	C6	O5	122.8	120.3
C4	C5	C6	H5	244.4	240.2
O5	C5	C6	H5	121.6	119.9
O6	C6	C5	H61	234.8	120.0
O6	C6	C5	H62	125.3	240.0
C5	C6	O6	HO6	180.0	180.1
H61	C6	C5	H62	250.5	120.0
C5	O5	C1	H1	174.2	172.3
O5	C5	C4	O4	61.0	58.6
O5	C5	C4	H4	179.9	178.8
C4	C5	O5	C6	234.0	239.9
C4	C5	O5	H5	116.0	120.1
C6	C5	O5	H5	241.9	240.2
O5	C5	C6	O6	59.7	64.9
O5	C5	C6	H61	184.9	304.9
O5	C5	C6	H62	294.4	184.9
H5	C5	C4	O4	182.4	178.7
H5	C5	C4	H4	301.2	298.9
C4	C5	H5	C6	122.8	119.8
C4	C5	H5	O5	240.5	239.7
C6	C5	H5	O5	117.8	119.9
H5	C5	C6	O6	298.1	305.0
H5	C5	C6	H61	63.3	185.0
H5	C5	C6	H62	172.8	65.0
O6	C6	C5	O5	59.7	64.9
O6	C6	C5	H5	298.1	305.0
C5	C6	O6	H61	125.2	240.0
C5	C6	O6	H62	234.7	120.0
H61	C6	O6	H62	109.5	240.0
H61	C6	C5	O5	184.9	304.9
H61	C6	C5	H5	63.3	185.0
C5	C6	H61	O6	236.8	120.0
C5	C6	H61	H62	118.4	240.0
O6	C6	H61	H62	241.6	120.0
H61	C6	O6	HO6	54.8	300.0
H62	C6	C5	O5	294.4	184.9
H62	C6	C5	H5	172.8	65.0
C5	C6	H62	O6	123.3	240.0
C5	C6	H62	H61	241.6	120.0
O6	C6	H62	H61	118.4	240.0
H62	C6	O6	HO6	305.3	60.0
C1	O1	C7	C8	275.9	185.4
C12	C7	C8	O1	180.0	179.7
C8	C7	C12	C11	359.9	0.2
C8	C7	C12	H12	179.9	180.3
C9	C8	C7	H8	180.0	179.4
C7	C8	C9	C10	0.2	0.5
C7	C8	C9	N1	180.1	180.3
C1	O1	C7	C12	95.9	5.7
C8	C7	C12	O1	180.0	180.3
C12	C7	C8	C9	360.0	359.4
C12	C7	C8	H8	179.9	180.0
C10	C11	C12	C7	0.1	0.1
C7	C12	C11	H11	180.2	180.0
C11	C12	C7	H12	180.0	179.9
C7	O1	C1	O5	64.2	65.7
C7	O1	C1	H1	305.0	305.8
C8	C7	O1	C12	180.0	179.7
O1	C7	C8	C9	179.9	179.8
O1	C7	C8	H8	359.9	0.3
O1	C7	C12	C11	179.9	179.9
O1	C7	C12	H12	359.9	360.0
C9	C8	C7	C12	360.0	359.4
C9	C8	C7	O1	179.9	179.8
C7	C8	C9	H8	180.0	180.6
C10	C9	C8	N1	180.1	180.2
C8	C9	C10	C11	359.8	359.8
C8	C9	C10	H10	179.8	179.7
C8	C9	N1	O7	179.5	180.3
C8	C9	N1	O8	0.0	0.2
H8	C8	C7	C12	179.9	180.0
H8	C8	C7	O1	359.9	0.3
C7	C8	H8	C9	180.0	179.4
H8	C8	C9	C10	180.2	180.0
H8	C8	C9	N1	0.1	359.7
C10	C9	C8	H8	180.2	180.0
C8	C9	C10	N1	179.9	179.8
C10	C9	N1	O7	359.3	0.0
C10	C9	N1	O8	179.9	180.0
C11	C10	C9	H10	180.0	180.1
C9	C10	C11	C12	0.0	359.9
C9	C10	C11	H11	180.0	180.0
N1	C9	C8	H8	0.1	359.7
C8	C9	N1	C10	180.1	180.2
N1	C9	C10	C11	179.9	180.0
N1	C9	C10	H10	359.9	360.0
O7	N1	C9	O8	179.5	180.0
C7	C12	C11	C10	0.1	0.1
C11	C10	C9	N1	179.9	180.0
C9	C10	C11	H10	180.0	179.9
C12	C11	C10	H11	180.0	179.9
C10	C11	C12	H12	180.1	180.0
H10	C10	C9	N1	359.9	360.0
C9	C10	H10	C11	180.0	180.1
H10	C10	C11	C12	180.0	180.0
H10	C10	C11	H11	0.0	0.0
C11	C12	C7	O1	179.9	179.9
C7	C12	C11	H12	180.0	180.1
C12	C11	C10	H10	180.0	180.0
C10	C11	C12	H11	180.0	180.1
H11	C11	C10	H10	0.0	0.0
C10	C11	H11	C12	180.0	179.9
H11	C11	C12	H12	0.1	360.0
H12	C12	C7	O1	359.9	360.0
C7	C12	H12	C11	180.0	179.9
H12	C12	C11	H11	0.1	360.0
C9	N1	O7	O8	180.5	180.0
C9	N1	O8	O7	179.5	180.0
HO2	O2	C2	H2	57.1	299.8
HO3	O3	C3	H3	296.0	60.3
HO4	O4	C4	H4	301.5	60.3
HO6	O6	C6	H61	54.8	300.0
HO6	O6	C6	H62	305.3	60.0