PDB Chemical Component G9V

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for G9V

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C19 N20 1.369 1.361
C19 C18 1.353 1.349
N20 C16 1.381 1.376
C18 C17 1.407 1.407
C16 C17 1.413 1.399
C16 C14 1.418 1.409
C17 C11 1.482 1.468
C3 N4 1.304 1.302
C3 N2 1.369 1.359
N4 C5 1.354 1.348
O15 C14 1.238 1.220
C14 N13 1.356 1.345
N2 C1 1.475 1.465
N2 C6 1.381 1.382
C5 C6 1.417 1.405
C5 C10 1.425 1.411
C11 C10 1.492 1.481
C11 C12 1.366 1.360
C6 C7 1.393 1.386
C10 C9 1.395 1.385
N13 C12 1.383 1.363
N13 C22 1.482 1.465
C7 C8 1.406 1.394
C9 C8 1.401 1.400
C8 C26 1.489 1.476
C22 C23 1.550 1.530
C23 C24 1.498 1.507
O27 C26 1.218 1.215
C26 N28 1.371 1.348
C24 C25 1.323 1.310
N28 C29 1.490 1.471
N28 C33 1.483 1.471
C29 C30 1.540 1.533
C33 C32 1.533 1.533
C30 O31 1.451 1.430
C32 O31 1.437 1.429
C7 H1 1.081 1.080
C9 H2 1.080 1.080
C29 H3 1.100 1.090
C29 H4 1.100 1.090
N20 H5 1.000 0.971
C18 H6 1.080 1.080
C1 H7 1.100 1.090
C1 H8 1.100 1.090
C1 H9 1.100 1.090
C24 H10 1.080 1.080
C25 H11 1.079 1.080
C25 H12 1.080 1.079
C32 H13 1.100 1.090
C32 H14 1.099 1.090
C22 H15 1.100 1.090
C22 H16 1.100 1.090
C12 H17 1.080 1.080
C19 H18 1.080 1.080
C33 H19 1.100 1.090
C33 H20 1.100 1.090
C3 H21 1.080 1.081
C23 H22 1.100 1.090
C23 H23 1.100 1.090
C30 H24 1.100 1.090
C30 H25 1.100 1.090

Bond Angles for G9V

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C19 N20 H5 125.7 125.6
C19 C18 H6 125.9 126.1
N20 C16 C17 107.1 107.0
N20 C16 C14 133.0 134.1
C16 N20 H5 125.7 125.5
C18 C17 C16 106.6 106.9
C18 C17 C11 134.9 134.5
C17 C18 H6 125.9 126.1
C17 C16 C14 119.9 118.9
C16 C14 O15 118.8 119.7
C16 C14 N13 119.9 120.6
C17 C11 C12 117.5 118.7
N4 C3 H21 125.0 125.0
O15 C14 N13 121.3 119.7
C6 N2 C1 126.2 126.5
N2 C1 H7 109.5 109.5
N2 C1 H8 109.5 109.5
N2 C1 H9 109.4 109.5
C11 C12 N13 122.5 121.0
C11 C12 H17 118.7 119.6
C6 C7 C8 119.9 120.0
C6 C7 H1 120.1 120.0
C10 C9 C8 121.1 120.2
C10 C9 H2 119.4 119.9
C22 N13 C12 117.7 118.9
N13 C12 H17 118.7 119.5
N13 C22 C23 109.8 109.4
N13 C22 H15 109.4 109.4
N13 C22 H16 109.4 109.5
C7 C8 C9 120.1 120.3
C7 C8 C26 118.6 119.9
C8 C7 H1 120.0 120.0
C9 C8 C26 121.2 119.9
C8 C9 H2 119.4 119.8
C8 C26 N28 121.2 120.0
C23 C22 H15 109.4 109.5
C23 C22 H16 109.4 109.5
C22 C23 H22 108.5 109.5
C22 C23 H23 108.5 109.5
C23 C24 H10 120.4 120.0
C25 C24 H10 120.4 120.0
C24 C25 H11 120.0 120.0
C24 C25 H12 120.0 120.0
N28 C29 C30 107.3 108.4
N28 C29 H3 110.0 109.7
N28 C29 H4 110.0 109.7
N28 C33 H19 109.6 109.7
N28 C33 H20 109.6 109.6
C29 C30 O31 107.8 109.2
C30 C29 H3 110.0 109.7
C30 C29 H4 110.0 109.7
C29 C30 H24 109.9 109.5
C29 C30 H25 109.9 109.6
C33 C32 H13 109.3 109.5
C33 C32 H14 109.3 109.5
O31 C32 H13 109.3 109.6
O31 C32 H14 109.3 109.5
H3 C29 H4 109.5 109.7
H7 C1 H8 109.5 109.5
H7 C1 H9 109.5 109.4
H8 C1 H9 109.5 109.5
H11 C25 H12 120.0 120.0
H13 C32 H14 109.5 109.5
H15 C22 H16 109.5 109.5
H19 C33 H20 109.5 109.7
H22 C23 H23 109.5 109.4
H24 C30 H25 109.5 109.5

Torsion Angles for G9V

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C19 N20 C16 C14 179.7 180.2
C16 N20 C19 H5 180.0 179.7
C18 C19 N20 H5 179.2 179.8
C17 C18 C19 H6 180.0 180.2
C19 N20 C16 H5 180.0 180.3
C18 C17 C16 N20 359.9 0.0
C17 C16 N20 C14 180.8 180.0
N20 C16 C14 O15 359.5 0.1
N20 C16 C14 N13 180.5 180.0
C19 C18 C17 H6 180.0 179.8
N20 C16 C17 C18 359.9 0.0
C18 C17 C16 C14 180.6 180.0
C18 C17 C11 C12 179.4 180.0
N20 C16 C17 C14 179.3 180.0
C17 C16 N20 H5 180.5 180.0
C18 C17 C16 C11 181.5 180.2
C16 C17 C18 H6 179.6 180.0
C17 C16 C14 O15 178.6 180.0
C17 C16 C14 N13 359.6 0.0
C16 C17 C11 C12 1.4 0.2
N20 C16 C14 C17 180.9 180.0
C14 C16 N20 H5 359.7 359.9
O15 C14 C16 N13 178.9 180.0
N20 C16 C17 C11 178.4 179.8
C18 C17 C11 C16 177.9 179.7
C11 C17 C18 H6 1.5 0.2
C17 C11 C12 N13 359.3 359.9
C17 C11 C12 H17 179.3 179.9
C3 N2 C1 H7 180.0 270.0
C3 N2 C1 H8 300.0 30.0
C3 N2 C1 H9 60.0 150.0
C16 C14 O15 N13 181.1 180.0
C16 C14 N13 O15 178.9 180.0
C14 N13 C12 H17 179.3 179.9
C14 N13 C22 C23 258.6 270.0
C14 N13 C22 H15 18.6 30.0
C14 N13 C22 H16 138.5 150.0
H7 C1 N2 H8 240.0 239.9
H7 C1 N2 H9 120.0 120.0
H8 C1 N2 H9 240.0 240.0
C6 N2 C1 H7 356.4 90.0
C6 N2 C1 H8 116.5 210.1
C6 N2 C1 H9 236.4 330.1
N2 C6 C7 C8 179.7 180.1
N2 C6 C7 H1 359.7 359.8
C5 C6 C7 H1 177.2 179.7
C5 C10 C9 H2 179.4 180.0
C11 C10 C9 C8 182.4 180.0
C11 C10 C9 H2 2.4 0.5
C22 N13 C12 C11 182.7 179.9
N13 C12 C11 H17 180.0 179.9
C6 C7 C8 C9 1.6 359.8
C6 C7 C8 C26 177.4 179.7
C8 C7 C6 H1 180.0 180.3
C7 C8 C9 C10 0.1 0.5
C10 C9 C8 C26 184.4 180.5
C8 C9 C10 H2 180.0 179.5
C16 C14 N13 C12 1.2 0.1
O15 C14 N13 C12 182.3 180.1
C11 C12 N13 H17 180.0 180.1
C12 N13 C22 C23 75.3 90.0
C12 N13 C22 H15 195.3 210.0
C12 N13 C22 H16 315.2 330.0
C16 C14 N13 C22 177.7 180.1
O15 C14 N13 C22 358.8 0.1
C11 C12 N13 C22 182.7 179.9
C22 N13 C12 H17 2.7 359.9
C23 C22 N13 H15 240.0 240.0
C23 C22 N13 H16 120.1 120.0
N13 C22 C23 H22 301.0 60.0
N13 C22 C23 H23 59.8 300.0
H15 C22 N13 H16 240.1 240.0
C6 C7 C8 H1 180.0 179.7
C10 C9 C8 C7 0.1 0.5
C9 C8 C7 C26 184.2 180.0
C7 C8 C9 H2 180.1 180.0
C7 C8 C26 N28 288.1 310.9
C10 C9 C8 H2 180.0 180.5
C7 C8 C9 C26 175.7 180.0
C9 C8 C7 H1 181.6 180.0
C9 C8 C26 N28 103.9 130.9
C7 C8 C26 C9 184.2 180.0
C26 C8 C7 H1 357.4 0.0
C26 C8 C9 H2 4.4 0.0
C23 C22 N13 C12 75.3 90.0
N13 C22 C23 H15 120.0 120.0
N13 C22 C23 H16 239.9 240.0
C22 C23 C24 H10 301.5 305.0
H15 C22 C23 H16 119.9 120.1
H22 C23 C22 H23 241.1 120.0
N13 C22 C23 C24 180.4 180.0
C25 C24 C23 H10 180.0 180.0
C23 C24 C25 H11 180.0 180.0
C23 C24 C25 H12 0.0 0.1
C26 N28 C29 C30 238.8 230.5
C26 N28 C29 H3 358.4 350.3
C26 N28 C29 H4 119.1 110.8
C26 N28 C33 H19 244.6 9.7
C26 N28 C33 H20 4.9 249.2
C23 C24 C25 H10 180.0 180.0
H11 C25 C24 H12 180.0 179.9
N28 C29 C30 O31 304.2 307.7
C30 C29 N28 H3 240.3 240.3
C30 C29 N28 H4 119.7 119.7
N28 C29 C30 H24 64.0 67.6
N28 C29 C30 H25 184.5 187.8
H3 C29 N28 H4 239.3 239.4
C8 C26 N28 C33 177.5 183.8
C33 N28 C29 C30 57.2 50.5
C33 N28 C29 H3 176.9 170.3
C33 N28 C29 H4 297.5 290.8
N28 C33 C32 H13 169.7 292.3
N28 C33 C32 H14 289.4 172.3
H19 C33 N28 H20 239.7 120.4
N28 C29 C30 H3 119.6 119.8
N28 C29 C30 H4 240.3 240.3
H3 C29 C30 H4 120.7 120.5
H24 C30 C29 H25 239.5 239.8
O31 C32 C33 H13 239.9 120.0
O31 C32 C33 H14 120.1 240.0
H13 C32 C33 H14 240.2 120.1
O31 C30 C29 H3 184.6 188.0
O31 C30 C29 H4 63.9 67.4
C29 C30 O31 H24 119.7 119.9
C29 C30 O31 H25 240.3 240.0
C30 O31 C32 H13 182.3 57.3
C30 O31 C32 H14 62.5 177.5
C29 C30 O31 C32 60.7 62.6
C33 C32 O31 H13 120.1 240.1
C33 C32 O31 H14 239.9 120.0
H13 C32 O31 H14 119.8 239.9
C6 C7 H1 C8 180.0 180.3
H1 C7 C8 C9 181.6 180.0
H1 C7 C8 C26 357.4 0.0
C10 C9 H2 C8 180.0 179.5
H2 C9 C8 C26 4.4 0.0
N28 C29 H3 C30 242.0 241.1
N28 C29 H3 H4 121.0 120.6
H3 C29 C30 O31 184.6 188.0
C30 C29 H3 H4 239.0 239.5
H3 C29 C30 H24 304.3 307.9
H3 C29 C30 H25 64.8 68.1
N28 C29 H4 C30 118.0 118.9
N28 C29 H4 H3 239.0 239.4
H4 C29 C30 O31 63.9 67.4
C30 C29 H4 H3 121.0 120.5
H4 C29 C30 H24 183.6 187.3
H4 C29 C30 H25 304.1 307.5
H5 N20 C16 C17 180.5 180.0
H5 N20 C16 C14 359.7 359.9
H6 C18 C17 C16 179.6 180.0
H6 C18 C17 C11 1.5 0.2
N2 C1 H7 H8 120.0 120.1
N2 C1 H7 H9 240.0 240.0
H8 C1 H7 H9 120.0 120.0
N2 C1 H8 H7 240.0 239.9
N2 C1 H8 H9 119.9 120.0
H7 C1 H8 H9 240.0 240.0
N2 C1 H9 H7 120.0 120.0
N2 C1 H9 H8 240.0 240.0
H7 C1 H9 H8 120.0 120.0
H10 C24 C25 H11 0.0 359.9
H10 C24 C25 H12 180.0 180.0
H11 C25 C24 H10 0.0 359.9
C24 C25 H11 H12 180.0 180.1
H12 C25 C24 H10 180.0 180.0
C24 C25 H12 H11 180.0 179.9
C33 C32 H13 H14 119.7 239.9
O31 C32 H13 H14 240.3 120.2
C33 C32 H14 H13 240.3 120.0
O31 C32 H14 H13 119.7 239.8
H15 C22 N13 C12 195.3 210.0
N13 C22 H15 C23 239.7 240.0
N13 C22 H15 H16 119.9 120.0
C23 C22 H15 H16 240.1 240.0
H15 C22 C23 H22 181.0 300.1
H15 C22 C23 H23 299.8 180.1
H16 C22 N13 C12 315.2 330.0
N13 C22 H16 C23 120.3 119.9
N13 C22 H16 H15 240.2 240.0
C23 C22 H16 H15 119.9 120.1
H16 C22 C23 H22 61.1 180.0
H16 C22 C23 H23 179.9 60.0
C11 C12 H17 N13 180.0 179.9
H18 C19 N20 H5 359.2 0.3
H18 C19 C18 H6 0.7 359.8
N28 C33 H19 H20 120.3 239.6
H19 C33 C32 H13 49.8 52.1
H19 C33 C32 H14 169.6 292.0
N28 C33 H20 H19 239.7 120.4
H20 C33 C32 H13 289.5 172.6
H20 C33 C32 H14 49.3 52.6
H22 C23 C22 H15 181.0 300.1
H22 C23 C22 H16 61.1 180.0
C22 C23 H22 H23 118.2 240.0
H22 C23 C24 H10 180.9 65.0
H23 C23 C22 H15 299.8 180.1
H23 C23 C22 H16 179.9 60.0
C22 C23 H23 H22 241.8 120.0
H23 C23 C24 H10 62.0 185.0
C29 C30 H24 O31 241.6 240.2
H24 C30 C29 H3 304.3 307.9
H24 C30 C29 H4 183.6 187.3
C29 C30 H24 H25 120.7 120.2
C29 C30 H25 O31 118.4 119.8
H25 C30 C29 H3 64.8 68.1
H25 C30 C29 H4 304.1 307.5
C29 C30 H25 H24 239.2 239.8