PDB Chemical Component G5E
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for G5E
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N9 |
C10 |
1.342 |
1.348 |
N9 |
N8 |
1.400 |
1.402 |
S18 |
C10 |
1.706 |
1.712 |
C10 |
N11 |
1.346 |
1.348 |
N8 |
C7 |
1.305 |
1.304 |
F19 |
C13 |
1.353 |
1.351 |
N11 |
C7 |
1.387 |
1.382 |
N11 |
C12 |
1.411 |
1.402 |
C7 |
C4 |
1.477 |
1.479 |
C13 |
C12 |
1.398 |
1.390 |
C13 |
C14 |
1.396 |
1.383 |
C12 |
C17 |
1.397 |
1.389 |
C4 |
C5 |
1.411 |
1.394 |
C4 |
C3 |
1.407 |
1.401 |
O20 |
C3 |
1.359 |
1.358 |
C14 |
C15 |
1.395 |
1.383 |
C5 |
C6 |
1.386 |
1.379 |
C3 |
C2 |
1.392 |
1.384 |
C17 |
C16 |
1.395 |
1.381 |
C15 |
C16 |
1.393 |
1.383 |
C6 |
C1 |
1.399 |
1.390 |
C2 |
C1 |
1.396 |
1.387 |
C1 |
O21 |
1.353 |
1.358 |
C2 |
H1 |
1.080 |
1.080 |
C14 |
H2 |
1.080 |
1.080 |
C15 |
H3 |
1.080 |
1.080 |
C16 |
H4 |
1.080 |
1.081 |
C5 |
H5 |
1.080 |
1.080 |
C6 |
H6 |
1.080 |
1.080 |
N9 |
H7 |
1.000 |
0.970 |
C17 |
H8 |
1.080 |
1.080 |
O20 |
H9 |
0.950 |
0.966 |
O21 |
H10 |
0.950 |
0.967 |
Bond Angles for G5E
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
N9 |
C10 |
N11 |
108.1 |
107.7 |
C10 |
N11 |
C12 |
125.3 |
125.9 |
N11 |
C12 |
C17 |
121.1 |
120.0 |
C7 |
C4 |
C5 |
120.5 |
120.1 |
C13 |
C12 |
C17 |
119.6 |
119.9 |
C13 |
C14 |
C15 |
120.0 |
120.1 |
C13 |
C14 |
H2 |
120.0 |
120.0 |
C12 |
C17 |
C16 |
120.2 |
119.9 |
C12 |
C17 |
H8 |
119.9 |
120.0 |
C4 |
C5 |
C6 |
119.4 |
119.9 |
C4 |
C5 |
H5 |
120.3 |
120.1 |
C14 |
C15 |
C16 |
120.0 |
120.1 |
C15 |
C14 |
H2 |
120.0 |
120.0 |
C14 |
C15 |
H3 |
120.0 |
120.0 |
C6 |
C5 |
H5 |
120.3 |
120.0 |
C5 |
C6 |
H6 |
120.0 |
119.9 |
C3 |
C2 |
H1 |
120.3 |
119.9 |
C17 |
C16 |
H4 |
119.9 |
119.9 |
C16 |
C15 |
H3 |
120.0 |
119.9 |
C15 |
C16 |
H4 |
120.0 |
119.9 |
C6 |
C1 |
O21 |
119.4 |
119.9 |
C2 |
C1 |
O21 |
119.6 |
119.9 |
C1 |
O21 |
H10 |
109.5 |
114.0 |
Torsion Angles for G5E
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
N9 |
C10 |
N11 |
C12 |
180.1 |
180.0 |
N8 |
N9 |
C10 |
N11 |
0.6 |
359.7 |
C10 |
N11 |
C12 |
C17 |
107.2 |
90.0 |
F19 |
C13 |
C14 |
H2 |
0.2 |
0.0 |
C13 |
C12 |
N11 |
C17 |
179.1 |
179.7 |
N11 |
C12 |
C17 |
C16 |
179.3 |
179.7 |
N11 |
C12 |
C17 |
H8 |
359.4 |
359.7 |
C7 |
C4 |
C5 |
C6 |
175.6 |
179.7 |
C7 |
C4 |
C5 |
H5 |
355.6 |
360.0 |
C10 |
N11 |
C12 |
C13 |
286.3 |
269.7 |
N11 |
C12 |
C13 |
C17 |
180.9 |
180.3 |
C13 |
C12 |
C17 |
C16 |
0.2 |
0.0 |
C13 |
C12 |
C17 |
H8 |
180.3 |
180.0 |
C14 |
C13 |
C12 |
C17 |
359.6 |
360.0 |
C13 |
C14 |
C15 |
C16 |
359.7 |
360.0 |
C15 |
C14 |
C13 |
H2 |
180.0 |
180.0 |
C13 |
C14 |
C15 |
H3 |
179.7 |
180.0 |
C12 |
C17 |
C16 |
H4 |
179.9 |
180.1 |
C6 |
C5 |
C4 |
H5 |
180.0 |
179.8 |
C4 |
C5 |
C6 |
H6 |
179.5 |
180.0 |
C4 |
C3 |
C2 |
H1 |
179.8 |
180.0 |
O20 |
C3 |
C2 |
H1 |
359.0 |
0.0 |
C13 |
C14 |
C15 |
H2 |
180.0 |
180.0 |
C16 |
C15 |
C14 |
H3 |
180.0 |
180.0 |
C14 |
C15 |
C16 |
H4 |
180.2 |
179.9 |
C4 |
C5 |
C6 |
H5 |
180.0 |
180.2 |
C5 |
C6 |
C1 |
O21 |
180.7 |
179.8 |
C3 |
C2 |
C1 |
O21 |
179.7 |
180.0 |
C12 |
C17 |
C16 |
H8 |
180.0 |
180.0 |
C17 |
C16 |
C15 |
H3 |
180.2 |
180.0 |
C15 |
C16 |
C17 |
H4 |
180.0 |
179.9 |
C12 |
C17 |
C16 |
C15 |
359.8 |
360.0 |
C16 |
C15 |
C14 |
H2 |
179.7 |
180.0 |
C14 |
C15 |
C16 |
H3 |
180.0 |
180.0 |
C17 |
C16 |
C15 |
H4 |
180.0 |
180.1 |
C2 |
C1 |
C6 |
O21 |
178.7 |
179.7 |
C6 |
C1 |
O21 |
H10 |
180.0 |
269.7 |
C6 |
C1 |
C2 |
O21 |
181.3 |
180.3 |
C2 |
C1 |
O21 |
H10 |
1.3 |
90.0 |
H1 |
C2 |
C1 |
O21 |
359.7 |
360.0 |
C13 |
C14 |
H2 |
C15 |
180.0 |
180.0 |
H2 |
C14 |
C15 |
C16 |
179.7 |
180.0 |
H2 |
C14 |
C15 |
H3 |
359.7 |
360.0 |
C14 |
C15 |
H3 |
C16 |
180.0 |
180.0 |
H3 |
C15 |
C14 |
H2 |
359.7 |
360.0 |
H3 |
C15 |
C16 |
H4 |
0.2 |
359.9 |
H4 |
C16 |
C15 |
H3 |
0.2 |
359.9 |
C4 |
C5 |
H5 |
C6 |
180.0 |
179.8 |
H5 |
C5 |
C6 |
H6 |
359.5 |
359.8 |
H6 |
C6 |
C5 |
H5 |
359.5 |
359.8 |
H6 |
C6 |
C1 |
O21 |
0.7 |
0.3 |
H7 |
N9 |
C10 |
N11 |
180.6 |
180.0 |
C12 |
C17 |
H8 |
C16 |
180.0 |
180.0 |
H8 |
C17 |
C16 |
H4 |
359.8 |
0.1 |