PDB Chemical Component G4Y
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for G4Y
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C22 |
N4 |
1.410 |
1.370 |
C22 |
N5 |
1.328 |
1.294 |
N4 |
C9 |
1.460 |
1.465 |
C20 |
C19 |
1.382 |
1.383 |
C20 |
C21 |
1.392 |
1.379 |
C8 |
C9 |
1.529 |
1.543 |
C8 |
C7 |
1.330 |
1.544 |
C9 |
C5 |
1.478 |
1.514 |
C19 |
C18 |
1.377 |
1.383 |
C21 |
C16 |
1.393 |
1.394 |
C7 |
C4 |
1.442 |
1.515 |
C5 |
C6 |
1.398 |
1.382 |
C5 |
C4 |
1.406 |
1.383 |
C6 |
C1 |
1.399 |
1.394 |
C4 |
C3 |
1.399 |
1.385 |
C18 |
C17 |
1.390 |
1.379 |
C16 |
C17 |
1.400 |
1.394 |
C16 |
C15 |
1.491 |
1.483 |
C1 |
C10 |
1.488 |
1.481 |
C1 |
C2 |
1.398 |
1.394 |
C3 |
C2 |
1.383 |
1.379 |
C15 |
C13 |
1.465 |
1.467 |
C15 |
C14 |
1.400 |
1.357 |
C10 |
C13 |
1.412 |
1.401 |
C10 |
N1 |
1.344 |
1.333 |
C13 |
C12 |
1.463 |
1.409 |
C14 |
N3 |
1.375 |
1.367 |
N1 |
C11 |
1.339 |
1.319 |
C12 |
N3 |
1.363 |
1.370 |
C12 |
N2 |
1.350 |
1.330 |
C11 |
N2 |
1.336 |
1.316 |
N3 |
H1 |
1.000 |
0.969 |
C7 |
H2 |
1.100 |
1.090 |
C7 |
H3 |
1.100 |
1.089 |
C6 |
H4 |
1.080 |
1.080 |
C9 |
H5 |
1.100 |
1.090 |
C20 |
H6 |
1.080 |
1.080 |
C21 |
H7 |
1.080 |
1.080 |
C8 |
H8 |
1.100 |
1.090 |
C8 |
H9 |
1.100 |
1.090 |
N5 |
H10 |
1.000 |
0.970 |
C18 |
H11 |
1.080 |
1.081 |
C19 |
H12 |
1.080 |
1.081 |
C2 |
H13 |
1.080 |
1.080 |
C3 |
H14 |
1.080 |
1.080 |
C11 |
H15 |
1.080 |
1.080 |
C14 |
H16 |
1.081 |
1.080 |
C17 |
H17 |
1.080 |
1.080 |
N4 |
H18 |
1.000 |
0.970 |
C22 |
H19 |
1.080 |
1.080 |
Bond Angles for G4Y
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C22 |
N4 |
H18 |
120.5 |
119.9 |
C22 |
N5 |
H10 |
112.0 |
120.0 |
N4 |
C9 |
H5 |
108.1 |
110.2 |
C21 |
C20 |
C19 |
120.3 |
120.1 |
C20 |
C19 |
C18 |
119.9 |
120.3 |
C19 |
C20 |
H6 |
119.8 |
119.9 |
C20 |
C19 |
H12 |
120.0 |
119.9 |
C20 |
C21 |
C16 |
120.4 |
119.9 |
C21 |
C20 |
H6 |
119.8 |
120.0 |
C20 |
C21 |
H7 |
119.8 |
120.1 |
C8 |
C9 |
C5 |
100.8 |
105.3 |
C8 |
C9 |
H5 |
107.3 |
110.3 |
C8 |
C7 |
H2 |
109.4 |
110.3 |
C8 |
C7 |
H3 |
109.4 |
110.3 |
C5 |
C9 |
H5 |
107.9 |
110.3 |
C19 |
C18 |
C17 |
120.3 |
120.1 |
C19 |
C18 |
H11 |
119.8 |
119.9 |
C21 |
C16 |
C17 |
118.7 |
119.7 |
C21 |
C16 |
C15 |
120.6 |
120.2 |
C16 |
C21 |
H7 |
119.8 |
120.0 |
C7 |
C4 |
C3 |
132.6 |
130.2 |
C5 |
C6 |
H4 |
119.1 |
120.0 |
C6 |
C1 |
C10 |
120.4 |
120.2 |
C6 |
C1 |
C2 |
118.2 |
119.6 |
C1 |
C6 |
H4 |
119.1 |
119.9 |
C4 |
C3 |
C2 |
120.2 |
120.4 |
C4 |
C3 |
H14 |
119.9 |
119.8 |
C18 |
C17 |
C16 |
120.4 |
119.9 |
C17 |
C18 |
H11 |
119.8 |
119.9 |
C18 |
C17 |
H17 |
119.8 |
120.1 |
C15 |
C16 |
C17 |
120.7 |
120.1 |
C16 |
C17 |
H17 |
119.8 |
120.0 |
C16 |
C15 |
C14 |
125.2 |
126.7 |
C2 |
C1 |
C10 |
121.3 |
120.2 |
C1 |
C10 |
N1 |
115.5 |
120.8 |
C1 |
C2 |
H13 |
119.5 |
120.1 |
C3 |
C2 |
H13 |
119.4 |
120.1 |
C15 |
C14 |
H16 |
124.7 |
125.1 |
C10 |
C13 |
C12 |
114.4 |
118.7 |
C10 |
N1 |
C11 |
118.4 |
121.0 |
C14 |
N3 |
H1 |
125.4 |
124.9 |
N1 |
C11 |
H15 |
115.8 |
118.6 |
C12 |
N3 |
H1 |
125.4 |
124.8 |
H2 |
C7 |
H3 |
109.4 |
110.3 |
H8 |
C8 |
H9 |
109.5 |
111.0 |
Torsion Angles for G4Y
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
N4 |
C22 |
N5 |
H10 |
0.0 |
359.9 |
C22 |
N4 |
C9 |
H5 |
334.8 |
327.1 |
C8 |
C9 |
N4 |
H5 |
123.1 |
122.0 |
C5 |
C9 |
N4 |
H5 |
241.0 |
237.9 |
C19 |
C20 |
C21 |
C16 |
359.0 |
360.0 |
C21 |
C20 |
C19 |
H6 |
180.0 |
179.7 |
C19 |
C20 |
C21 |
H7 |
179.0 |
180.0 |
C20 |
C19 |
C18 |
C17 |
0.9 |
0.0 |
C20 |
C19 |
C18 |
H11 |
180.9 |
180.0 |
C21 |
C20 |
C19 |
C18 |
359.9 |
360.0 |
C19 |
C20 |
C21 |
H6 |
180.0 |
180.3 |
C21 |
C20 |
C19 |
H12 |
179.9 |
180.0 |
C20 |
C21 |
C16 |
C17 |
1.3 |
0.1 |
C20 |
C21 |
C16 |
C15 |
182.1 |
180.0 |
C16 |
C21 |
C20 |
H7 |
180.0 |
180.0 |
N4 |
C9 |
C8 |
H5 |
236.4 |
238.0 |
C9 |
C8 |
C7 |
H2 |
115.4 |
214.7 |
C9 |
C8 |
C7 |
H3 |
235.2 |
92.5 |
C5 |
C9 |
C8 |
H5 |
112.8 |
119.0 |
C8 |
C7 |
C4 |
C3 |
180.5 |
197.2 |
H2 |
C7 |
C8 |
H3 |
240.2 |
122.1 |
N4 |
C9 |
C5 |
H5 |
119.2 |
122.0 |
C8 |
C9 |
C5 |
H5 |
247.7 |
241.1 |
C9 |
C5 |
C6 |
H4 |
352.6 |
0.7 |
C18 |
C19 |
C20 |
H6 |
179.9 |
180.3 |
C20 |
C19 |
C18 |
H12 |
180.0 |
180.0 |
C19 |
C18 |
C17 |
C16 |
359.3 |
0.0 |
C17 |
C18 |
C19 |
H11 |
180.0 |
180.1 |
C19 |
C18 |
C17 |
H17 |
179.3 |
179.9 |
C16 |
C21 |
C20 |
C19 |
359.0 |
360.0 |
C16 |
C21 |
C20 |
H6 |
179.0 |
179.7 |
C20 |
C21 |
C16 |
H7 |
180.0 |
180.0 |
C18 |
C17 |
C16 |
C21 |
359.6 |
359.9 |
C15 |
C16 |
C21 |
C17 |
180.8 |
180.0 |
C21 |
C16 |
C17 |
H17 |
179.6 |
180.1 |
C21 |
C16 |
C15 |
C14 |
229.1 |
310.0 |
C7 |
C4 |
C3 |
C2 |
172.9 |
180.0 |
C7 |
C4 |
C3 |
H14 |
352.9 |
0.1 |
C5 |
C6 |
C1 |
C10 |
175.9 |
180.8 |
C1 |
C6 |
C5 |
H4 |
180.0 |
179.2 |
C5 |
C4 |
C3 |
H14 |
178.4 |
179.7 |
C5 |
C6 |
C1 |
H4 |
180.0 |
180.8 |
C2 |
C1 |
C6 |
C10 |
181.8 |
180.0 |
C6 |
C1 |
C10 |
N1 |
43.1 |
311.9 |
C6 |
C1 |
C2 |
H13 |
183.6 |
180.0 |
C4 |
C3 |
C2 |
H13 |
178.3 |
179.8 |
C19 |
C18 |
C17 |
H11 |
180.0 |
179.9 |
C21 |
C16 |
C17 |
C18 |
359.6 |
359.9 |
C15 |
C16 |
C17 |
C18 |
178.7 |
180.0 |
C16 |
C17 |
C18 |
H17 |
180.0 |
180.1 |
C21 |
C16 |
C17 |
C15 |
180.8 |
180.0 |
C17 |
C16 |
C21 |
H7 |
181.3 |
180.0 |
C16 |
C17 |
C18 |
H11 |
179.3 |
180.1 |
C18 |
C17 |
C16 |
H17 |
180.0 |
179.9 |
C17 |
C16 |
C15 |
C14 |
50.0 |
130.0 |
C21 |
C16 |
C15 |
C17 |
179.1 |
180.0 |
C15 |
C16 |
C21 |
H7 |
2.1 |
0.0 |
C18 |
C17 |
C16 |
C15 |
178.7 |
180.0 |
C15 |
C16 |
C17 |
H17 |
358.8 |
0.1 |
C16 |
C15 |
C14 |
H16 |
355.3 |
0.1 |
C6 |
C1 |
C10 |
C2 |
181.9 |
180.0 |
C10 |
C1 |
C6 |
H4 |
355.9 |
0.0 |
C10 |
C1 |
C2 |
H13 |
5.4 |
360.0 |
C1 |
C10 |
C13 |
C12 |
186.7 |
180.0 |
C1 |
C10 |
N1 |
C11 |
175.6 |
180.0 |
C6 |
C1 |
C2 |
C10 |
178.2 |
180.0 |
C2 |
C1 |
C6 |
H4 |
177.7 |
180.0 |
C4 |
C3 |
C2 |
C1 |
358.3 |
0.7 |
C2 |
C1 |
C10 |
N1 |
221.2 |
131.9 |
C3 |
C2 |
C1 |
H13 |
180.0 |
179.1 |
C4 |
C3 |
C2 |
H14 |
180.0 |
180.1 |
C3 |
C2 |
C1 |
C10 |
185.4 |
179.1 |
C1 |
C2 |
C3 |
H13 |
180.0 |
180.9 |
C14 |
C15 |
C16 |
C17 |
50.0 |
130.0 |
C15 |
C14 |
N3 |
H1 |
179.3 |
180.0 |
C6 |
C1 |
C10 |
C13 |
221.3 |
131.9 |
N1 |
C10 |
C13 |
C12 |
4.8 |
0.0 |
C10 |
N1 |
C11 |
H15 |
179.0 |
180.0 |
C13 |
C12 |
N3 |
H1 |
181.8 |
180.0 |
C12 |
N3 |
C14 |
H1 |
180.0 |
179.8 |
C14 |
N3 |
C12 |
H1 |
180.0 |
180.2 |
N2 |
C12 |
N3 |
H1 |
4.3 |
0.0 |
C8 |
C7 |
H2 |
H3 |
119.8 |
237.8 |
H2 |
C7 |
C4 |
C3 |
60.4 |
316.1 |
C8 |
C7 |
H3 |
H2 |
240.2 |
122.1 |
H3 |
C7 |
C4 |
C3 |
300.5 |
78.2 |
H4 |
C6 |
C1 |
C10 |
355.9 |
0.0 |
H4 |
C6 |
C1 |
C2 |
177.7 |
180.0 |
C8 |
C9 |
H5 |
C5 |
107.8 |
115.9 |
C21 |
C20 |
H6 |
C19 |
180.0 |
180.3 |
H6 |
C20 |
C19 |
C18 |
179.9 |
180.3 |
H6 |
C20 |
C19 |
H12 |
360.0 |
0.2 |
H6 |
C20 |
C21 |
C16 |
179.0 |
179.7 |
H6 |
C20 |
C21 |
H7 |
358.9 |
359.7 |
H7 |
C21 |
C20 |
C19 |
179.0 |
180.0 |
C20 |
C21 |
H7 |
C16 |
180.0 |
180.0 |
H7 |
C21 |
C20 |
H6 |
358.9 |
359.7 |
H7 |
C21 |
C16 |
C17 |
181.3 |
180.0 |
H7 |
C21 |
C16 |
C15 |
2.1 |
0.0 |
H8 |
C8 |
C9 |
C5 |
131.6 |
268.2 |
H8 |
C8 |
C9 |
H5 |
18.8 |
149.3 |
H8 |
C8 |
C7 |
H2 |
355.2 |
332.8 |
H8 |
C8 |
C7 |
H3 |
115.1 |
210.6 |
H9 |
C8 |
C9 |
C5 |
251.3 |
144.6 |
H9 |
C8 |
C9 |
H5 |
138.5 |
25.6 |
H9 |
C8 |
C7 |
H2 |
235.5 |
96.3 |
H9 |
C8 |
C7 |
H3 |
355.4 |
334.2 |
C19 |
C18 |
H11 |
C17 |
180.0 |
180.1 |
H11 |
C18 |
C17 |
C16 |
179.3 |
180.1 |
H11 |
C18 |
C17 |
H17 |
359.3 |
360.0 |
C20 |
C19 |
H12 |
C18 |
180.0 |
180.0 |
H12 |
C19 |
C20 |
H6 |
360.0 |
0.2 |
H12 |
C19 |
C18 |
C17 |
180.9 |
180.0 |
H12 |
C19 |
C18 |
H11 |
0.9 |
360.0 |
H13 |
C2 |
C1 |
C10 |
5.4 |
360.0 |
C4 |
C3 |
H14 |
C2 |
180.0 |
179.9 |
H14 |
C3 |
C2 |
H13 |
358.3 |
359.7 |
H16 |
C14 |
N3 |
H1 |
359.3 |
360.0 |
C18 |
C17 |
H17 |
C16 |
180.0 |
180.1 |
H17 |
C17 |
C18 |
H11 |
359.3 |
360.0 |
H18 |
N4 |
C9 |
H5 |
154.8 |
147.1 |
H19 |
C22 |
N4 |
H18 |
359.7 |
359.9 |
H19 |
C22 |
N5 |
H10 |
180.0 |
180.0 |