PDB Chemical Component G48

Ideal Model

Chemical Description

Name 2'-O-METHYOXYETHYL-GUANOSINE-5'-MONOPHOSPHATE
Formula C13 H20 N5 O9 P
Formal charge 0
Molecular weight 421.300 g/mol
Component type RNA LINKING
Nonstandard Parent Id G

Chemical features

Atom count 48
Chiral atom count 4
Chiral atoms C4' C3' C2' C1'
Observed leaving atoms OP3 HOP3 HO3'
Bond count 50
Aromatic bond count 5

Chemical Identifiers

Systematic name (ACDLabs) 2'-O-(2-methoxyethyl)guanosine 5'-(dihydrogen phosphate)
Systematic name (OpenEye OEToolkits) [(2R,3R,4R,5R)-5-(2-azanyl-6-oxidanylidene-1H-purin-9-yl)-4-(2-methoxyethoxy)-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) COCCO[C@@H]1[C@H](O)[C@@H](CO[P](O)(O)=O)O[C@H]1n2cnc3C(=O)NC(=Nc23)N
SMILES (CACTVS) COCCO[CH]1[CH](O)[CH](CO[P](O)(O)=O)O[CH]1n2cnc3C(=O)NC(=Nc23)N
Stereo SMILES (OpenEye) COCCO[C@@H]1[C@@H]([C@H](O[C@H]1n2cnc3c2N=C(NC3=O)N)COP(=O)(O)O)O
InChI descriptor InChI=1S/C13H20N5O9P/c1-24-2-3-25-9-8(19)6(4-26-28(21,22)23)27-12(9)18-5-15-7-10(18)16-13(14)17-11(7)20/h5-6,8-9,12,19H,2-4H2,1H3,(H2,21,22,23)(H3,14,16,17,20)/t6-,8-,9-,12-/m1/s1
InChIKey descriptor XPQHQKCWTLHVLZ-WOUKDFQISA-N

Status Information

Last modified 2013-01-10
Created 1999-05-12
Release status REL
Model PDB code 468D
Processing site RCSB