PDB Chemical Component G2L

Ideal Model

Chemical Description

Name 3'-O-METHYOXYETHYL-GUANOSINE-5'-MONOPHOSPHATE
Formula C13 H20 N5 O9 P
Formal charge 0
Molecular weight 421.300 g/mol
Component type RNA LINKING
Nonstandard Parent Id G

Chemical features

Atom count 48
Chiral atom count 4
Chiral atoms C4' C3' C2' C1'
Observed leaving atoms OP3
Bond count 50
Aromatic bond count 5

Chemical Identifiers

Systematic name (ACDLabs) 3'-O-(2-methoxyethyl)guanosine 5'-(dihydrogen phosphate)
Systematic name (OpenEye OEToolkits) [(2R,3S,4R,5R)-5-(2-amino-6-oxo-1H-purin-9-yl)-4-hydroxy-3-(2-methoxyethoxy)oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) COCCO[C@H]1[C@@H](O)[C@@H](O[C@@H]1CO[P](O)(O)=O)n2cnc3C(=O)NC(=Nc23)N
SMILES (CACTVS) COCCO[CH]1[CH](O)[CH](O[CH]1CO[P](O)(O)=O)n2cnc3C(=O)NC(=Nc23)N
Stereo SMILES (OpenEye) COCCO[C@@H]1[C@H](O[C@H]([C@@H]1O)n2cnc3c2N=C(NC3=O)N)COP(=O)(O)O
InChI descriptor InChI=1S/C13H20N5O9P/c1-24-2-3-25-9-6(4-26-28(21,22)23)27-12(8(9)19)18-5-15-7-10(18)16-13(14)17-11(7)20/h5-6,8-9,12,19H,2-4H2,1H3,(H2,21,22,23)(H3,14,16,17,20)/t6-,8-,9-,12-/m1/s1
InChIKey descriptor ICKYKWCJEMPHMX-WOUKDFQISA-N

Status Information

Last modified 2011-06-04
Created 2004-10-29
Release status REL
Processing site RCSB