PDB Chemical Component FTD

Ideal Model

Chemical Description

Name [(2R,5S)-5-(4-amino-5-fluoro-2-oxo-3,6-dihydropyrimidin-1(2H)-yl)-1,3-oxathiolan-2-yl]methyl trihydrogen diphosphate
Formula C8 H14 F N3 O9 P2 S
Formal charge 0
Molecular weight 409.222 g/mol
Component type NON-POLYMER

Chemical features

Atom count 38
Chiral atom count 2
Chiral atoms C1' C4'
Bond count 39
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) [(2R,5S)-5-(4-amino-5-fluoro-2-oxo-3,6-dihydropyrimidin-1(2H)-yl)-1,3-oxathiolan-2-yl]methyl trihydrogen diphosphate
Systematic name (OpenEye OEToolkits) [(2R,5S)-5-(6-azanyl-5-fluoranyl-2-oxidanylidene-1,4-dihydropyrimidin-3-yl)-1,3-oxathiolan-2-yl]methyl phosphono hydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) NC1=C(F)CN([C@@H]2CS[C@H](CO[P](O)(=O)O[P](O)(O)=O)O2)C(=O)N1
SMILES (CACTVS) NC1=C(F)CN([CH]2CS[CH](CO[P](O)(=O)O[P](O)(O)=O)O2)C(=O)N1
Stereo SMILES (OpenEye) C1[C@H](O[C@H](S1)COP(=O)(O)OP(=O)(O)O)N2CC(=C(NC2=O)N)F
InChI descriptor InChI=1S/C8H14FN3O9P2S/c9-4-1-12(8(13)11-7(4)10)5-3-24-6(20-5)2-19-23(17,18)21-22(14,15)16/h5-6H,1-3,10H2,(H,11,13)(H,17,18)(H2,14,15,16)/t5-,6+/m0/s1
InChIKey descriptor DSUZHKWUVJBGFZ-NTSWFWBYSA-N

Status Information

Last modified 2014-08-22
Created 2012-01-06
Release status REL
Model PDB code 3VCT
Processing site RCSB