PDB Chemical Component FRU
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for FRU
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.550 |
1.529 |
C1 |
O1 |
1.424 |
1.429 |
C1 |
H11 |
1.115 |
1.090 |
C1 |
H12 |
1.114 |
1.090 |
C2 |
C3 |
1.564 |
1.540 |
C2 |
O2 |
1.455 |
1.429 |
C2 |
O5 |
1.470 |
1.436 |
C3 |
C4 |
1.552 |
1.550 |
C3 |
O3 |
1.435 |
1.429 |
C3 |
H3 |
1.115 |
1.091 |
C4 |
C5 |
1.542 |
1.549 |
C4 |
O4 |
1.422 |
1.428 |
C4 |
H4 |
1.115 |
1.089 |
C5 |
C6 |
1.506 |
1.529 |
C5 |
O5 |
1.456 |
1.443 |
C5 |
H5 |
1.116 |
1.090 |
C6 |
O6 |
1.417 |
1.429 |
C6 |
H61 |
1.116 |
1.090 |
C6 |
H62 |
1.115 |
1.089 |
O1 |
HO1 |
0.950 |
0.966 |
O2 |
HO2 |
0.950 |
0.967 |
O3 |
HO3 |
0.950 |
0.966 |
O4 |
HO4 |
0.951 |
0.968 |
O6 |
HO6 |
0.951 |
0.967 |
Bond Angles for FRU
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
O1 |
112.8 |
109.5 |
C2 |
C1 |
H11 |
111.0 |
109.5 |
C2 |
C1 |
H12 |
111.0 |
109.4 |
C1 |
C2 |
C3 |
114.2 |
110.0 |
C1 |
C2 |
O2 |
109.7 |
109.8 |
C1 |
C2 |
O5 |
110.6 |
109.9 |
O1 |
C1 |
H11 |
111.0 |
109.5 |
O1 |
C1 |
H12 |
111.0 |
109.5 |
C1 |
O1 |
HO1 |
112.8 |
106.8 |
H11 |
C1 |
H12 |
99.4 |
109.5 |
C3 |
C2 |
O2 |
108.8 |
109.8 |
C3 |
C2 |
O5 |
105.3 |
107.3 |
C2 |
C3 |
C4 |
99.4 |
104.3 |
C2 |
C3 |
O3 |
111.2 |
110.6 |
C2 |
C3 |
H3 |
115.6 |
110.5 |
O2 |
C2 |
O5 |
107.9 |
109.9 |
C2 |
O2 |
HO2 |
109.7 |
106.8 |
C2 |
O5 |
C5 |
107.4 |
107.0 |
C4 |
C3 |
O3 |
111.7 |
110.7 |
C4 |
C3 |
H3 |
115.1 |
110.3 |
C3 |
C4 |
C5 |
98.6 |
102.0 |
C3 |
C4 |
O4 |
112.3 |
110.9 |
C3 |
C4 |
H4 |
116.1 |
110.9 |
O3 |
C3 |
H3 |
104.2 |
110.4 |
C3 |
O3 |
HO3 |
111.1 |
106.8 |
C5 |
C4 |
O4 |
113.3 |
111.1 |
C5 |
C4 |
H4 |
115.1 |
110.8 |
C4 |
C5 |
C6 |
114.7 |
110.6 |
C4 |
C5 |
O5 |
106.4 |
103.6 |
C4 |
C5 |
H5 |
107.5 |
110.6 |
O4 |
C4 |
H4 |
102.1 |
110.8 |
C4 |
O4 |
HO4 |
112.3 |
106.8 |
C6 |
C5 |
O5 |
107.6 |
110.7 |
C6 |
C5 |
H5 |
106.3 |
110.5 |
C5 |
C6 |
O6 |
109.4 |
109.5 |
C5 |
C6 |
H61 |
112.3 |
109.5 |
C5 |
C6 |
H62 |
112.3 |
109.5 |
O5 |
C5 |
H5 |
114.6 |
110.6 |
O6 |
C6 |
H61 |
112.2 |
109.4 |
O6 |
C6 |
H62 |
112.2 |
109.4 |
C6 |
O6 |
HO6 |
109.4 |
106.8 |
H61 |
C6 |
H62 |
98.2 |
109.5 |
Torsion Angles for FRU
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
C1 |
C2 |
H11 |
234.8 |
240.0 |
O1 |
C1 |
C2 |
H12 |
125.3 |
120.0 |
C2 |
C1 |
O1 |
HO1 |
180.0 |
180.0 |
H11 |
C1 |
C2 |
H12 |
250.5 |
240.0 |
C3 |
C2 |
C1 |
O2 |
237.5 |
239.0 |
C3 |
C2 |
C1 |
O5 |
118.6 |
117.9 |
C1 |
C2 |
C3 |
C4 |
201.1 |
242.7 |
C1 |
C2 |
C3 |
O3 |
83.4 |
123.7 |
C1 |
C2 |
C3 |
H3 |
324.9 |
1.1 |
O2 |
C2 |
C1 |
O5 |
241.0 |
239.0 |
C1 |
C2 |
O2 |
HO2 |
179.9 |
59.5 |
C1 |
C2 |
O5 |
C5 |
136.4 |
93.1 |
C2 |
C1 |
O1 |
H11 |
125.2 |
120.1 |
C2 |
C1 |
O1 |
H12 |
234.7 |
240.0 |
O1 |
C1 |
C2 |
C3 |
49.6 |
179.4 |
O1 |
C1 |
C2 |
O2 |
172.0 |
300.4 |
O1 |
C1 |
C2 |
O5 |
291.0 |
61.4 |
H11 |
C1 |
O1 |
H12 |
109.5 |
120.0 |
C2 |
C1 |
H11 |
O1 |
233.7 |
240.0 |
C2 |
C1 |
H11 |
H12 |
116.9 |
120.0 |
H11 |
C1 |
C2 |
C3 |
174.8 |
299.4 |
H11 |
C1 |
C2 |
O2 |
297.2 |
60.5 |
H11 |
C1 |
C2 |
O5 |
56.2 |
181.5 |
O1 |
C1 |
H11 |
H12 |
243.2 |
240.0 |
H11 |
C1 |
O1 |
HO1 |
54.7 |
59.9 |
C2 |
C1 |
H12 |
O1 |
126.3 |
120.0 |
C2 |
C1 |
H12 |
H11 |
243.2 |
240.0 |
H12 |
C1 |
C2 |
C3 |
284.3 |
59.4 |
H12 |
C1 |
C2 |
O2 |
46.8 |
180.4 |
H12 |
C1 |
C2 |
O5 |
165.7 |
301.5 |
O1 |
C1 |
H12 |
H11 |
116.8 |
120.0 |
H12 |
C1 |
O1 |
HO1 |
305.2 |
300.0 |
C3 |
C2 |
C1 |
O1 |
49.6 |
179.4 |
C3 |
C2 |
C1 |
H11 |
174.8 |
299.4 |
C3 |
C2 |
C1 |
H12 |
284.3 |
59.4 |
C1 |
C2 |
C3 |
O2 |
122.9 |
121.0 |
C1 |
C2 |
C3 |
O5 |
238.4 |
240.5 |
O2 |
C2 |
C3 |
O5 |
115.5 |
119.4 |
C3 |
C2 |
O2 |
HO2 |
305.5 |
180.7 |
C3 |
C2 |
O5 |
C5 |
12.6 |
333.5 |
C4 |
C3 |
C2 |
O3 |
117.8 |
119.0 |
C4 |
C3 |
C2 |
H3 |
236.3 |
241.5 |
C2 |
C3 |
C4 |
C5 |
45.6 |
20.6 |
C2 |
C3 |
C4 |
O4 |
165.3 |
139.0 |
C2 |
C3 |
C4 |
H4 |
282.2 |
262.6 |
O3 |
C3 |
C2 |
H3 |
118.5 |
122.6 |
C2 |
C3 |
O3 |
HO3 |
180.0 |
180.0 |
O2 |
C2 |
C1 |
O1 |
172.0 |
300.4 |
O2 |
C2 |
C1 |
H11 |
297.2 |
60.5 |
O2 |
C2 |
C1 |
H12 |
46.8 |
180.4 |
C1 |
C2 |
O2 |
C3 |
234.4 |
238.9 |
C1 |
C2 |
O2 |
O5 |
120.6 |
121.0 |
C3 |
C2 |
O2 |
O5 |
246.2 |
242.2 |
O2 |
C2 |
C3 |
C4 |
78.2 |
121.6 |
O2 |
C2 |
C3 |
O3 |
320.4 |
2.6 |
O2 |
C2 |
C3 |
H3 |
202.0 |
240.1 |
O2 |
C2 |
O5 |
C5 |
256.5 |
214.1 |
O5 |
C2 |
C1 |
O1 |
291.0 |
61.4 |
O5 |
C2 |
C1 |
H11 |
56.2 |
181.5 |
O5 |
C2 |
C1 |
H12 |
165.7 |
301.5 |
C1 |
C2 |
O5 |
C3 |
123.8 |
119.6 |
C1 |
C2 |
O5 |
O2 |
240.0 |
239.0 |
C3 |
C2 |
O5 |
O2 |
116.1 |
119.4 |
O5 |
C2 |
C3 |
C4 |
322.7 |
2.2 |
O5 |
C2 |
C3 |
O3 |
204.9 |
243.2 |
O5 |
C2 |
C3 |
H3 |
86.4 |
120.7 |
O5 |
C2 |
O2 |
HO2 |
59.3 |
298.5 |
C4 |
C5 |
O5 |
C2 |
17.8 |
39.9 |
C6 |
C5 |
O5 |
C2 |
141.2 |
158.6 |
C2 |
O5 |
C5 |
H5 |
259.2 |
281.4 |
C4 |
C3 |
C2 |
O2 |
78.2 |
121.6 |
C4 |
C3 |
C2 |
O5 |
322.7 |
2.2 |
C2 |
C3 |
C4 |
O3 |
242.6 |
241.1 |
C2 |
C3 |
C4 |
H3 |
124.1 |
118.6 |
O3 |
C3 |
C4 |
H3 |
241.5 |
237.6 |
C4 |
C3 |
O3 |
HO3 |
69.9 |
65.0 |
C5 |
C4 |
C3 |
O4 |
240.4 |
241.6 |
C5 |
C4 |
C3 |
H4 |
123.4 |
118.0 |
C3 |
C4 |
C5 |
C6 |
200.5 |
204.6 |
C3 |
C4 |
C5 |
O5 |
319.4 |
323.2 |
C3 |
C4 |
C5 |
H5 |
82.6 |
81.8 |
O4 |
C4 |
C3 |
H4 |
243.1 |
236.4 |
C3 |
C4 |
O4 |
HO4 |
180.0 |
180.0 |
O3 |
C3 |
C2 |
O2 |
320.4 |
2.6 |
O3 |
C3 |
C2 |
O5 |
204.9 |
243.2 |
C2 |
C3 |
O3 |
C4 |
110.0 |
115.0 |
C2 |
C3 |
O3 |
H3 |
234.8 |
237.4 |
C4 |
C3 |
O3 |
H3 |
124.8 |
122.4 |
O3 |
C3 |
C4 |
C5 |
163.0 |
139.5 |
O3 |
C3 |
C4 |
O4 |
282.6 |
258.0 |
O3 |
C3 |
C4 |
H4 |
39.6 |
21.6 |
H3 |
C3 |
C2 |
O2 |
202.0 |
240.1 |
H3 |
C3 |
C2 |
O5 |
86.4 |
120.7 |
C2 |
C3 |
H3 |
C4 |
244.9 |
245.2 |
C2 |
C3 |
H3 |
O3 |
122.3 |
122.7 |
C4 |
C3 |
H3 |
O3 |
237.4 |
237.4 |
H3 |
C3 |
C4 |
C5 |
281.5 |
262.0 |
H3 |
C3 |
C4 |
O4 |
41.1 |
20.4 |
H3 |
C3 |
C4 |
H4 |
158.1 |
144.0 |
H3 |
C3 |
O3 |
HO3 |
305.1 |
302.6 |
C2 |
O5 |
C5 |
C4 |
17.8 |
39.9 |
C5 |
C4 |
C3 |
O3 |
163.0 |
139.5 |
C5 |
C4 |
C3 |
H3 |
281.5 |
262.0 |
C3 |
C4 |
C5 |
O4 |
118.8 |
118.3 |
C3 |
C4 |
C5 |
H4 |
235.8 |
241.9 |
O4 |
C4 |
C5 |
H4 |
117.0 |
123.6 |
C5 |
C4 |
O4 |
HO4 |
290.6 |
292.7 |
C6 |
C5 |
C4 |
O5 |
241.1 |
241.4 |
C6 |
C5 |
C4 |
H5 |
117.9 |
122.8 |
C4 |
C5 |
C6 |
O6 |
197.7 |
177.9 |
C4 |
C5 |
C6 |
H61 |
323.0 |
57.9 |
C4 |
C5 |
C6 |
H62 |
72.5 |
297.8 |
O5 |
C5 |
C4 |
H5 |
236.8 |
241.5 |
O4 |
C4 |
C3 |
O3 |
282.6 |
258.0 |
O4 |
C4 |
C3 |
H3 |
41.1 |
20.4 |
C3 |
C4 |
O4 |
C5 |
249.4 |
247.3 |
C3 |
C4 |
O4 |
H4 |
125.1 |
123.7 |
C5 |
C4 |
O4 |
H4 |
235.6 |
236.4 |
O4 |
C4 |
C5 |
C6 |
81.7 |
86.3 |
O4 |
C4 |
C5 |
O5 |
200.6 |
205.0 |
O4 |
C4 |
C5 |
H5 |
323.8 |
323.5 |
H4 |
C4 |
C3 |
O3 |
39.6 |
21.6 |
H4 |
C4 |
C3 |
H3 |
158.1 |
144.0 |
C3 |
C4 |
H4 |
C5 |
114.4 |
112.5 |
C3 |
C4 |
H4 |
O4 |
237.5 |
236.3 |
C5 |
C4 |
H4 |
O4 |
123.2 |
123.8 |
H4 |
C4 |
C5 |
C6 |
324.7 |
322.7 |
H4 |
C4 |
C5 |
O5 |
83.6 |
81.3 |
H4 |
C4 |
C5 |
H5 |
206.8 |
199.9 |
H4 |
C4 |
O4 |
HO4 |
54.9 |
56.3 |
C2 |
O5 |
C5 |
C6 |
141.2 |
158.6 |
C6 |
C5 |
C4 |
O4 |
81.7 |
86.3 |
C6 |
C5 |
C4 |
H4 |
324.7 |
322.7 |
C4 |
C5 |
C6 |
O5 |
118.2 |
114.3 |
C4 |
C5 |
C6 |
H5 |
241.4 |
237.1 |
O5 |
C5 |
C6 |
H5 |
123.2 |
122.8 |
O6 |
C6 |
C5 |
H61 |
234.7 |
120.0 |
O6 |
C6 |
C5 |
H62 |
125.2 |
240.1 |
C5 |
C6 |
O6 |
HO6 |
180.0 |
180.0 |
H61 |
C6 |
C5 |
H62 |
250.5 |
120.1 |
O5 |
C5 |
C4 |
O4 |
200.6 |
205.0 |
O5 |
C5 |
C4 |
H4 |
83.6 |
81.3 |
C4 |
C5 |
O5 |
C6 |
236.6 |
241.4 |
C4 |
C5 |
O5 |
H5 |
118.7 |
118.6 |
C6 |
C5 |
O5 |
H5 |
242.1 |
237.2 |
O5 |
C5 |
C6 |
O6 |
79.5 |
63.6 |
O5 |
C5 |
C6 |
H61 |
204.7 |
303.6 |
O5 |
C5 |
C6 |
H62 |
314.2 |
183.5 |
H5 |
C5 |
C4 |
O4 |
323.8 |
323.5 |
H5 |
C5 |
C4 |
H4 |
206.8 |
199.9 |
C4 |
C5 |
H5 |
C6 |
123.2 |
122.9 |
C4 |
C5 |
H5 |
O5 |
241.9 |
245.8 |
C6 |
C5 |
H5 |
O5 |
118.7 |
122.9 |
H5 |
C5 |
C6 |
O6 |
316.3 |
300.8 |
H5 |
C5 |
C6 |
H61 |
81.5 |
180.8 |
H5 |
C5 |
C6 |
H62 |
191.0 |
60.7 |
O6 |
C6 |
C5 |
O5 |
79.5 |
63.6 |
O6 |
C6 |
C5 |
H5 |
316.3 |
300.8 |
C5 |
C6 |
O6 |
H61 |
125.3 |
240.0 |
C5 |
C6 |
O6 |
H62 |
234.7 |
120.0 |
H61 |
C6 |
O6 |
H62 |
109.4 |
240.1 |
H61 |
C6 |
C5 |
O5 |
204.7 |
303.6 |
H61 |
C6 |
C5 |
H5 |
81.5 |
180.8 |
C5 |
C6 |
H61 |
O6 |
236.3 |
120.0 |
C5 |
C6 |
H61 |
H62 |
118.2 |
239.9 |
O6 |
C6 |
H61 |
H62 |
241.9 |
119.9 |
H61 |
C6 |
O6 |
HO6 |
54.7 |
300.1 |
H62 |
C6 |
C5 |
O5 |
314.2 |
183.5 |
H62 |
C6 |
C5 |
H5 |
191.0 |
60.7 |
C5 |
C6 |
H62 |
O6 |
123.7 |
240.0 |
C5 |
C6 |
H62 |
H61 |
241.8 |
120.1 |
O6 |
C6 |
H62 |
H61 |
118.1 |
240.1 |
H62 |
C6 |
O6 |
HO6 |
305.3 |
60.0 |
HO1 |
O1 |
C1 |
H11 |
54.7 |
59.9 |
HO1 |
O1 |
C1 |
H12 |
305.2 |
300.0 |
HO2 |
O2 |
C2 |
O5 |
59.3 |
298.5 |
HO3 |
O3 |
C3 |
H3 |
305.1 |
302.6 |
HO4 |
O4 |
C4 |
H4 |
54.9 |
56.3 |
HO6 |
O6 |
C6 |
H61 |
54.7 |
300.1 |
HO6 |
O6 |
C6 |
H62 |
305.3 |
60.0 |