PDB Chemical Component FRD
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for FRD
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N |
CA |
1.473 |
1.469 |
N |
H |
1.000 |
1.009 |
N |
H2 |
1.000 |
1.010 |
CA |
C |
1.537 |
1.529 |
CA |
CB |
1.527 |
1.529 |
CA |
HA |
1.100 |
1.090 |
C |
HC1 |
1.099 |
1.090 |
C |
HC2 |
1.100 |
1.090 |
C |
HC3 |
1.100 |
1.089 |
CB |
CG |
1.497 |
1.507 |
CB |
HB2 |
1.100 |
1.089 |
CB |
HB3 |
1.100 |
1.090 |
CG |
CD1 |
1.401 |
1.382 |
CG |
CD2 |
1.399 |
1.382 |
CD1 |
CE1 |
1.388 |
1.383 |
CD1 |
HD1 |
1.080 |
1.079 |
CD2 |
CE2 |
1.402 |
1.382 |
CD2 |
HD2 |
1.080 |
1.080 |
CE1 |
CZ |
1.396 |
1.382 |
CE1 |
HE1 |
1.080 |
1.080 |
CE2 |
CZ |
1.399 |
1.382 |
CE2 |
HE2 |
1.080 |
1.079 |
CZ |
HZ |
1.080 |
1.080 |
Bond Angles for FRD
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
CA |
N |
H |
109.5 |
106.7 |
CA |
N |
H2 |
109.5 |
106.7 |
N |
CA |
C |
112.4 |
109.4 |
N |
CA |
CB |
109.6 |
109.5 |
N |
CA |
HA |
107.5 |
109.4 |
H |
N |
H2 |
109.4 |
106.7 |
C |
CA |
CB |
110.0 |
109.5 |
C |
CA |
HA |
107.1 |
109.5 |
CA |
C |
HC1 |
109.4 |
109.5 |
CA |
C |
HC2 |
109.4 |
109.4 |
CA |
C |
HC3 |
109.5 |
109.5 |
CB |
CA |
HA |
110.1 |
109.5 |
CA |
CB |
CG |
118.5 |
109.5 |
CA |
CB |
HB2 |
104.5 |
109.5 |
CA |
CB |
HB3 |
106.6 |
109.4 |
HC1 |
C |
HC2 |
109.5 |
109.5 |
HC1 |
C |
HC3 |
109.5 |
109.5 |
HC2 |
C |
HC3 |
109.5 |
109.5 |
CG |
CB |
HB2 |
104.4 |
109.5 |
CG |
CB |
HB3 |
106.5 |
109.4 |
CB |
CG |
CD1 |
121.5 |
120.0 |
CB |
CG |
CD2 |
118.5 |
120.0 |
HB2 |
CB |
HB3 |
116.9 |
109.5 |
CD1 |
CG |
CD2 |
120.0 |
120.0 |
CG |
CD1 |
CE1 |
121.0 |
120.0 |
CG |
CD1 |
HD1 |
119.5 |
120.0 |
CG |
CD2 |
CE2 |
120.2 |
120.0 |
CG |
CD2 |
HD2 |
119.9 |
120.0 |
CE1 |
CD1 |
HD1 |
119.5 |
120.0 |
CD1 |
CE1 |
CZ |
117.9 |
120.0 |
CD1 |
CE1 |
HE1 |
121.0 |
120.0 |
CE2 |
CD2 |
HD2 |
119.9 |
120.0 |
CD2 |
CE2 |
CZ |
118.1 |
120.0 |
CD2 |
CE2 |
HE2 |
120.9 |
120.0 |
CZ |
CE1 |
HE1 |
121.0 |
120.0 |
CE1 |
CZ |
CE2 |
122.8 |
120.0 |
CE1 |
CZ |
HZ |
118.6 |
120.0 |
CZ |
CE2 |
HE2 |
121.0 |
120.0 |
CE2 |
CZ |
HZ |
118.6 |
120.0 |
Torsion Angles for FRD
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
H |
N |
CA |
H2 |
120.0 |
246.2 |
C |
CA |
N |
CB |
122.7 |
120.0 |
C |
CA |
N |
HA |
242.3 |
240.0 |
N |
CA |
C |
HC1 |
265.9 |
60.0 |
N |
CA |
C |
HC2 |
145.9 |
180.0 |
N |
CA |
C |
HC3 |
25.9 |
299.9 |
CB |
CA |
N |
HA |
119.6 |
120.0 |
N |
CA |
CB |
CG |
311.9 |
300.0 |
N |
CA |
CB |
HB2 |
196.2 |
60.0 |
N |
CA |
CB |
HB3 |
71.9 |
180.1 |
CA |
N |
H |
H2 |
240.0 |
113.8 |
H |
N |
CA |
C |
294.3 |
60.1 |
H |
N |
CA |
CB |
171.6 |
300.0 |
H |
N |
CA |
HA |
52.0 |
180.1 |
CA |
N |
H2 |
H |
120.0 |
246.2 |
H2 |
N |
CA |
C |
174.4 |
173.8 |
H2 |
N |
CA |
CB |
51.7 |
53.8 |
H2 |
N |
CA |
HA |
292.0 |
293.8 |
C |
CA |
N |
H |
294.3 |
60.1 |
C |
CA |
N |
H2 |
174.4 |
173.8 |
N |
CA |
C |
CB |
237.6 |
240.0 |
N |
CA |
C |
HA |
117.9 |
120.0 |
CB |
CA |
C |
HA |
240.4 |
240.0 |
C |
CA |
CB |
CG |
187.8 |
180.0 |
C |
CA |
CB |
HB2 |
72.1 |
300.0 |
C |
CA |
CB |
HB3 |
307.8 |
60.1 |
HC1 |
C |
CA |
HC2 |
120.0 |
240.0 |
HC1 |
C |
CA |
HC3 |
240.0 |
120.1 |
HC2 |
C |
CA |
HC3 |
120.0 |
240.1 |
CB |
CA |
N |
H |
171.6 |
300.0 |
CB |
CA |
N |
H2 |
51.7 |
53.8 |
N |
CA |
CB |
C |
124.1 |
120.0 |
N |
CA |
CB |
HA |
241.9 |
240.1 |
C |
CA |
CB |
HA |
117.8 |
120.1 |
CB |
CA |
C |
HC1 |
28.4 |
180.0 |
CB |
CA |
C |
HC2 |
268.4 |
300.0 |
CB |
CA |
C |
HC3 |
148.4 |
59.9 |
CG |
CB |
CA |
HB2 |
115.7 |
240.0 |
CG |
CB |
CA |
HB3 |
240.0 |
119.9 |
CA |
CB |
CG |
CD1 |
326.5 |
90.0 |
CA |
CB |
CG |
CD2 |
148.7 |
269.7 |
HB2 |
CB |
CA |
HB3 |
124.3 |
240.0 |
HA |
CA |
N |
H |
52.0 |
180.1 |
HA |
CA |
N |
H2 |
292.0 |
293.8 |
N |
CA |
HA |
C |
238.9 |
240.0 |
N |
CA |
HA |
CB |
119.3 |
120.0 |
C |
CA |
HA |
CB |
240.4 |
239.9 |
HA |
CA |
C |
HC1 |
148.0 |
300.0 |
HA |
CA |
C |
HC2 |
28.0 |
60.0 |
HA |
CA |
C |
HC3 |
268.0 |
179.9 |
HA |
CA |
CB |
CG |
70.0 |
59.9 |
HA |
CA |
CB |
HB2 |
314.3 |
180.0 |
HA |
CA |
CB |
HB3 |
189.9 |
300.0 |
HC1 |
C |
CA |
CB |
28.4 |
180.0 |
HC1 |
C |
CA |
HA |
148.0 |
300.0 |
CA |
C |
HC1 |
HC2 |
240.0 |
119.9 |
CA |
C |
HC1 |
HC3 |
120.0 |
239.9 |
HC2 |
C |
HC1 |
HC3 |
240.0 |
120.0 |
HC2 |
C |
CA |
CB |
268.4 |
300.0 |
HC2 |
C |
CA |
HA |
28.0 |
60.0 |
CA |
C |
HC2 |
HC1 |
120.0 |
240.0 |
CA |
C |
HC2 |
HC3 |
240.0 |
120.0 |
HC1 |
C |
HC2 |
HC3 |
120.0 |
240.0 |
HC3 |
C |
CA |
CB |
148.4 |
59.9 |
HC3 |
C |
CA |
HA |
268.0 |
179.9 |
CA |
C |
HC3 |
HC1 |
240.0 |
120.1 |
CA |
C |
HC3 |
HC2 |
120.0 |
240.1 |
HC1 |
C |
HC3 |
HC2 |
239.9 |
120.0 |
CG |
CB |
CA |
HA |
70.0 |
59.9 |
CA |
CB |
CG |
HB2 |
244.3 |
120.0 |
CA |
CB |
CG |
HB3 |
120.0 |
240.0 |
HB2 |
CB |
CG |
HB3 |
235.7 |
120.0 |
CD1 |
CG |
CB |
CD2 |
177.8 |
180.3 |
CB |
CG |
CD1 |
CE1 |
179.9 |
180.0 |
CB |
CG |
CD1 |
HD1 |
359.9 |
0.0 |
CB |
CG |
CD2 |
CE2 |
180.1 |
179.8 |
CB |
CG |
CD2 |
HD2 |
0.0 |
0.2 |
HB2 |
CB |
CA |
HA |
314.3 |
180.0 |
CA |
CB |
HB2 |
CG |
125.1 |
240.0 |
CA |
CB |
HB2 |
HB3 |
242.5 |
120.0 |
CG |
CB |
HB2 |
HB3 |
117.4 |
240.0 |
HB2 |
CB |
CG |
CD1 |
82.2 |
330.0 |
HB2 |
CB |
CG |
CD2 |
264.4 |
149.7 |
HB3 |
CB |
CA |
HA |
189.9 |
300.0 |
CA |
CB |
HB3 |
CG |
232.6 |
120.0 |
CA |
CB |
HB3 |
HB2 |
116.3 |
240.0 |
CG |
CB |
HB3 |
HB2 |
243.8 |
120.0 |
HB3 |
CB |
CG |
CD1 |
206.5 |
210.0 |
HB3 |
CB |
CG |
CD2 |
28.7 |
29.7 |
CD1 |
CG |
CB |
HB2 |
82.2 |
330.0 |
CD1 |
CG |
CB |
HB3 |
206.5 |
210.0 |
CB |
CG |
CD1 |
CD2 |
182.2 |
179.7 |
CD1 |
CG |
CD2 |
CE2 |
2.2 |
359.5 |
CD1 |
CG |
CD2 |
HD2 |
182.1 |
179.9 |
CE1 |
CD1 |
CG |
HD1 |
180.0 |
180.0 |
CG |
CD1 |
CE1 |
CZ |
2.0 |
360.0 |
CG |
CD1 |
CE1 |
HE1 |
182.0 |
179.9 |
CD2 |
CG |
CB |
HB2 |
264.4 |
149.7 |
CD2 |
CG |
CB |
HB3 |
28.7 |
29.7 |
CB |
CG |
CD2 |
CD1 |
177.9 |
180.3 |
CD2 |
CG |
CD1 |
CE1 |
357.7 |
0.3 |
CD2 |
CG |
CD1 |
HD1 |
177.7 |
180.3 |
CE2 |
CD2 |
CG |
HD2 |
180.0 |
179.5 |
CG |
CD2 |
CE2 |
CZ |
358.2 |
0.5 |
CG |
CD2 |
CE2 |
HE2 |
178.3 |
180.3 |
CE1 |
CD1 |
CG |
CD2 |
357.7 |
0.3 |
CG |
CD1 |
CE1 |
HD1 |
180.0 |
180.0 |
CZ |
CE1 |
CD1 |
HE1 |
180.0 |
180.0 |
CD1 |
CE1 |
CZ |
CE2 |
358.4 |
360.0 |
CD1 |
CE1 |
CZ |
HZ |
178.4 |
180.0 |
HD1 |
CD1 |
CG |
CD2 |
177.7 |
180.3 |
CG |
CD1 |
HD1 |
CE1 |
180.0 |
180.0 |
HD1 |
CD1 |
CE1 |
CZ |
182.0 |
180.0 |
HD1 |
CD1 |
CE1 |
HE1 |
2.0 |
359.9 |
CG |
CD2 |
CE2 |
HD2 |
180.0 |
180.5 |
CE1 |
CZ |
CE2 |
CD2 |
1.5 |
359.8 |
CZ |
CE2 |
CD2 |
HE2 |
180.0 |
180.2 |
CD2 |
CE2 |
CZ |
HZ |
181.5 |
179.8 |
CG |
CD2 |
HD2 |
CE2 |
180.0 |
179.5 |
HD2 |
CD2 |
CE2 |
CZ |
178.3 |
180.0 |
HD2 |
CD2 |
CE2 |
HE2 |
358.3 |
359.8 |
CZ |
CE1 |
CD1 |
HD1 |
182.0 |
180.0 |
CD1 |
CE1 |
CZ |
HE1 |
180.0 |
180.0 |
CD2 |
CE2 |
CZ |
CE1 |
1.5 |
359.8 |
CE1 |
CZ |
CE2 |
HE2 |
181.5 |
180.0 |
CE2 |
CZ |
CE1 |
HZ |
180.0 |
180.0 |
HE1 |
CE1 |
CD1 |
HD1 |
2.0 |
359.9 |
CD1 |
CE1 |
HE1 |
CZ |
180.0 |
180.0 |
HE1 |
CE1 |
CZ |
CE2 |
178.4 |
180.0 |
HE1 |
CE1 |
CZ |
HZ |
358.4 |
360.0 |
CZ |
CE2 |
CD2 |
HD2 |
178.3 |
180.0 |
CD2 |
CE2 |
CZ |
HE2 |
180.0 |
179.8 |
CE2 |
CZ |
CE1 |
HE1 |
178.4 |
180.0 |
CE1 |
CZ |
CE2 |
HZ |
180.0 |
180.0 |
HE2 |
CE2 |
CD2 |
HD2 |
358.3 |
359.8 |
CD2 |
CE2 |
HE2 |
CZ |
180.0 |
180.2 |
HE2 |
CE2 |
CZ |
HZ |
1.5 |
360.0 |
HZ |
CZ |
CE1 |
HE1 |
358.4 |
360.0 |
CE1 |
CZ |
HZ |
CE2 |
180.0 |
180.0 |
HZ |
CZ |
CE2 |
HE2 |
1.5 |
360.0 |