PDB Chemical Component FRD

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for FRD

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N CA 1.473 1.469
N H 1.000 1.009
N H2 1.000 1.010
CA C 1.537 1.529
CA CB 1.527 1.529
CA HA 1.100 1.090
C HC1 1.099 1.090
C HC2 1.100 1.090
C HC3 1.100 1.089
CB CG 1.497 1.507
CB HB2 1.100 1.089
CB HB3 1.100 1.090
CG CD1 1.401 1.382
CG CD2 1.399 1.382
CD1 CE1 1.388 1.383
CD1 HD1 1.080 1.079
CD2 CE2 1.402 1.382
CD2 HD2 1.080 1.080
CE1 CZ 1.396 1.382
CE1 HE1 1.080 1.080
CE2 CZ 1.399 1.382
CE2 HE2 1.080 1.079
CZ HZ 1.080 1.080

Bond Angles for FRD

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
CA N H 109.5 106.7
CA N H2 109.5 106.7
N CA C 112.4 109.4
N CA CB 109.6 109.5
N CA HA 107.5 109.4
H N H2 109.4 106.7
C CA CB 110.0 109.5
C CA HA 107.1 109.5
CA C HC1 109.4 109.5
CA C HC2 109.4 109.4
CA C HC3 109.5 109.5
CB CA HA 110.1 109.5
CA CB CG 118.5 109.5
CA CB HB2 104.5 109.5
CA CB HB3 106.6 109.4
HC1 C HC2 109.5 109.5
HC1 C HC3 109.5 109.5
HC2 C HC3 109.5 109.5
CG CB HB2 104.4 109.5
CG CB HB3 106.5 109.4
CB CG CD1 121.5 120.0
CB CG CD2 118.5 120.0
HB2 CB HB3 116.9 109.5
CD1 CG CD2 120.0 120.0
CG CD1 CE1 121.0 120.0
CG CD1 HD1 119.5 120.0
CG CD2 CE2 120.2 120.0
CG CD2 HD2 119.9 120.0
CE1 CD1 HD1 119.5 120.0
CD1 CE1 CZ 117.9 120.0
CD1 CE1 HE1 121.0 120.0
CE2 CD2 HD2 119.9 120.0
CD2 CE2 CZ 118.1 120.0
CD2 CE2 HE2 120.9 120.0
CZ CE1 HE1 121.0 120.0
CE1 CZ CE2 122.8 120.0
CE1 CZ HZ 118.6 120.0
CZ CE2 HE2 121.0 120.0
CE2 CZ HZ 118.6 120.0

Torsion Angles for FRD

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
H N CA H2 120.0 246.2
C CA N CB 122.7 120.0
C CA N HA 242.3 240.0
N CA C HC1 265.9 60.0
N CA C HC2 145.9 180.0
N CA C HC3 25.9 299.9
CB CA N HA 119.6 120.0
N CA CB CG 311.9 300.0
N CA CB HB2 196.2 60.0
N CA CB HB3 71.9 180.1
CA N H H2 240.0 113.8
H N CA C 294.3 60.1
H N CA CB 171.6 300.0
H N CA HA 52.0 180.1
CA N H2 H 120.0 246.2
H2 N CA C 174.4 173.8
H2 N CA CB 51.7 53.8
H2 N CA HA 292.0 293.8
C CA N H 294.3 60.1
C CA N H2 174.4 173.8
N CA C CB 237.6 240.0
N CA C HA 117.9 120.0
CB CA C HA 240.4 240.0
C CA CB CG 187.8 180.0
C CA CB HB2 72.1 300.0
C CA CB HB3 307.8 60.1
HC1 C CA HC2 120.0 240.0
HC1 C CA HC3 240.0 120.1
HC2 C CA HC3 120.0 240.1
CB CA N H 171.6 300.0
CB CA N H2 51.7 53.8
N CA CB C 124.1 120.0
N CA CB HA 241.9 240.1
C CA CB HA 117.8 120.1
CB CA C HC1 28.4 180.0
CB CA C HC2 268.4 300.0
CB CA C HC3 148.4 59.9
CG CB CA HB2 115.7 240.0
CG CB CA HB3 240.0 119.9
CA CB CG CD1 326.5 90.0
CA CB CG CD2 148.7 269.7
HB2 CB CA HB3 124.3 240.0
HA CA N H 52.0 180.1
HA CA N H2 292.0 293.8
N CA HA C 238.9 240.0
N CA HA CB 119.3 120.0
C CA HA CB 240.4 239.9
HA CA C HC1 148.0 300.0
HA CA C HC2 28.0 60.0
HA CA C HC3 268.0 179.9
HA CA CB CG 70.0 59.9
HA CA CB HB2 314.3 180.0
HA CA CB HB3 189.9 300.0
HC1 C CA CB 28.4 180.0
HC1 C CA HA 148.0 300.0
CA C HC1 HC2 240.0 119.9
CA C HC1 HC3 120.0 239.9
HC2 C HC1 HC3 240.0 120.0
HC2 C CA CB 268.4 300.0
HC2 C CA HA 28.0 60.0
CA C HC2 HC1 120.0 240.0
CA C HC2 HC3 240.0 120.0
HC1 C HC2 HC3 120.0 240.0
HC3 C CA CB 148.4 59.9
HC3 C CA HA 268.0 179.9
CA C HC3 HC1 240.0 120.1
CA C HC3 HC2 120.0 240.1
HC1 C HC3 HC2 239.9 120.0
CG CB CA HA 70.0 59.9
CA CB CG HB2 244.3 120.0
CA CB CG HB3 120.0 240.0
HB2 CB CG HB3 235.7 120.0
CD1 CG CB CD2 177.8 180.3
CB CG CD1 CE1 179.9 180.0
CB CG CD1 HD1 359.9 0.0
CB CG CD2 CE2 180.1 179.8
CB CG CD2 HD2 0.0 0.2
HB2 CB CA HA 314.3 180.0
CA CB HB2 CG 125.1 240.0
CA CB HB2 HB3 242.5 120.0
CG CB HB2 HB3 117.4 240.0
HB2 CB CG CD1 82.2 330.0
HB2 CB CG CD2 264.4 149.7
HB3 CB CA HA 189.9 300.0
CA CB HB3 CG 232.6 120.0
CA CB HB3 HB2 116.3 240.0
CG CB HB3 HB2 243.8 120.0
HB3 CB CG CD1 206.5 210.0
HB3 CB CG CD2 28.7 29.7
CD1 CG CB HB2 82.2 330.0
CD1 CG CB HB3 206.5 210.0
CB CG CD1 CD2 182.2 179.7
CD1 CG CD2 CE2 2.2 359.5
CD1 CG CD2 HD2 182.1 179.9
CE1 CD1 CG HD1 180.0 180.0
CG CD1 CE1 CZ 2.0 360.0
CG CD1 CE1 HE1 182.0 179.9
CD2 CG CB HB2 264.4 149.7
CD2 CG CB HB3 28.7 29.7
CB CG CD2 CD1 177.9 180.3
CD2 CG CD1 CE1 357.7 0.3
CD2 CG CD1 HD1 177.7 180.3
CE2 CD2 CG HD2 180.0 179.5
CG CD2 CE2 CZ 358.2 0.5
CG CD2 CE2 HE2 178.3 180.3
CE1 CD1 CG CD2 357.7 0.3
CG CD1 CE1 HD1 180.0 180.0
CZ CE1 CD1 HE1 180.0 180.0
CD1 CE1 CZ CE2 358.4 360.0
CD1 CE1 CZ HZ 178.4 180.0
HD1 CD1 CG CD2 177.7 180.3
CG CD1 HD1 CE1 180.0 180.0
HD1 CD1 CE1 CZ 182.0 180.0
HD1 CD1 CE1 HE1 2.0 359.9
CG CD2 CE2 HD2 180.0 180.5
CE1 CZ CE2 CD2 1.5 359.8
CZ CE2 CD2 HE2 180.0 180.2
CD2 CE2 CZ HZ 181.5 179.8
CG CD2 HD2 CE2 180.0 179.5
HD2 CD2 CE2 CZ 178.3 180.0
HD2 CD2 CE2 HE2 358.3 359.8
CZ CE1 CD1 HD1 182.0 180.0
CD1 CE1 CZ HE1 180.0 180.0
CD2 CE2 CZ CE1 1.5 359.8
CE1 CZ CE2 HE2 181.5 180.0
CE2 CZ CE1 HZ 180.0 180.0
HE1 CE1 CD1 HD1 2.0 359.9
CD1 CE1 HE1 CZ 180.0 180.0
HE1 CE1 CZ CE2 178.4 180.0
HE1 CE1 CZ HZ 358.4 360.0
CZ CE2 CD2 HD2 178.3 180.0
CD2 CE2 CZ HE2 180.0 179.8
CE2 CZ CE1 HE1 178.4 180.0
CE1 CZ CE2 HZ 180.0 180.0
HE2 CE2 CD2 HD2 358.3 359.8
CD2 CE2 HE2 CZ 180.0 180.2
HE2 CE2 CZ HZ 1.5 360.0
HZ CZ CE1 HE1 358.4 360.0
CE1 CZ HZ CE2 180.0 180.0
HZ CZ CE2 HE2 1.5 360.0