PDB Chemical Component FOB
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for FOB
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
OP2 |
PA1 |
1.506 |
1.480 |
OP3 |
PA1 |
1.503 |
1.610 |
PA1 |
OP1 |
1.491 |
1.610 |
PA1 |
C4 |
1.728 |
1.823 |
C3 |
C4 |
1.503 |
1.530 |
C3 |
C2 |
1.541 |
1.530 |
C4 |
CG |
1.564 |
1.507 |
O2 |
N1 |
1.407 |
1.416 |
C2 |
N1 |
1.459 |
1.465 |
N1 |
C1 |
1.298 |
1.347 |
CG |
CD1 |
1.411 |
1.387 |
CG |
CD2 |
1.429 |
1.387 |
CD1 |
CE1 |
1.403 |
1.382 |
CD2 |
CE2 |
1.404 |
1.382 |
C1 |
O1 |
1.219 |
1.213 |
C1 |
CH3 |
1.509 |
1.507 |
CE1 |
NZ |
1.348 |
1.318 |
CE2 |
NZ |
1.344 |
1.319 |
CH3 |
H1 |
1.100 |
1.090 |
CH3 |
H2 |
1.100 |
1.090 |
CH3 |
H3 |
1.100 |
1.090 |
O2 |
H4 |
0.950 |
0.967 |
C2 |
H5 |
1.100 |
1.090 |
C2 |
H6 |
1.100 |
1.091 |
C3 |
H7 |
1.100 |
1.089 |
C3 |
H8 |
1.100 |
1.090 |
C4 |
H9 |
1.100 |
1.090 |
OP1 |
H10 |
0.950 |
0.967 |
OP3 |
H11 |
0.950 |
0.967 |
CD1 |
H12 |
1.080 |
1.080 |
CD2 |
H13 |
1.080 |
1.079 |
CE1 |
H14 |
1.080 |
1.080 |
CE2 |
H15 |
1.079 |
1.081 |
Bond Angles for FOB
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
PA1 |
OP1 |
H10 |
109.5 |
114.0 |
PA1 |
C4 |
CG |
111.0 |
109.5 |
PA1 |
C4 |
H9 |
107.1 |
109.5 |
C3 |
C4 |
CG |
110.9 |
109.4 |
C4 |
C3 |
H7 |
108.3 |
109.5 |
C4 |
C3 |
H8 |
108.3 |
109.5 |
C3 |
C4 |
H9 |
109.7 |
109.5 |
C3 |
C2 |
H5 |
112.1 |
109.5 |
C3 |
C2 |
H6 |
112.1 |
109.5 |
C4 |
CG |
CD1 |
118.8 |
120.8 |
C4 |
CG |
CD2 |
122.6 |
120.8 |
CG |
C4 |
H9 |
108.9 |
109.4 |
O2 |
N1 |
C1 |
119.2 |
120.0 |
N1 |
O2 |
H4 |
109.5 |
114.0 |
N1 |
C1 |
O1 |
116.8 |
120.0 |
CD1 |
CG |
CD2 |
118.6 |
118.4 |
CG |
CD1 |
CE1 |
119.1 |
119.2 |
CG |
CD1 |
H12 |
120.5 |
120.4 |
CG |
CD2 |
CE2 |
119.1 |
119.1 |
CG |
CD2 |
H13 |
120.4 |
120.4 |
CD1 |
CE1 |
NZ |
120.5 |
120.8 |
CE1 |
CD1 |
H12 |
120.4 |
120.5 |
CD1 |
CE1 |
H14 |
119.7 |
119.6 |
CD2 |
CE2 |
NZ |
120.1 |
120.8 |
CE2 |
CD2 |
H13 |
120.5 |
120.5 |
CD2 |
CE2 |
H15 |
120.0 |
119.6 |
C1 |
CH3 |
H1 |
109.5 |
109.5 |
C1 |
CH3 |
H2 |
109.5 |
109.5 |
C1 |
CH3 |
H3 |
109.5 |
109.4 |
CE1 |
NZ |
CE2 |
122.7 |
121.8 |
NZ |
CE1 |
H14 |
119.8 |
119.7 |
NZ |
CE2 |
H15 |
120.0 |
119.6 |
H1 |
CH3 |
H2 |
109.5 |
109.5 |
H1 |
CH3 |
H3 |
109.4 |
109.5 |
H2 |
CH3 |
H3 |
109.5 |
109.5 |
H5 |
C2 |
H6 |
109.5 |
109.4 |
H7 |
C3 |
H8 |
109.5 |
109.5 |
Torsion Angles for FOB
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
OP2 |
PA1 |
OP1 |
H10 |
360.0 |
180.0 |
OP2 |
PA1 |
C4 |
CG |
198.0 |
177.2 |
OP2 |
PA1 |
C4 |
H9 |
79.2 |
57.2 |
OP3 |
PA1 |
OP1 |
H10 |
129.6 |
60.0 |
OP3 |
PA1 |
C4 |
CG |
80.0 |
297.2 |
OP3 |
PA1 |
C4 |
H9 |
321.3 |
177.2 |
OP1 |
PA1 |
C4 |
CG |
319.2 |
57.2 |
OP1 |
PA1 |
C4 |
H9 |
200.4 |
297.2 |
C3 |
C4 |
PA1 |
CG |
122.6 |
120.0 |
PA1 |
C4 |
C3 |
H7 |
300.1 |
306.0 |
PA1 |
C4 |
C3 |
H8 |
58.7 |
186.0 |
C3 |
C4 |
PA1 |
H9 |
241.3 |
239.9 |
PA1 |
C4 |
CG |
CD1 |
247.2 |
255.0 |
PA1 |
C4 |
CG |
CD2 |
67.6 |
74.7 |
CG |
C4 |
PA1 |
H9 |
118.8 |
120.0 |
PA1 |
C4 |
C3 |
CG |
237.4 |
240.0 |
PA1 |
C4 |
C3 |
H9 |
117.0 |
120.1 |
C4 |
C3 |
C2 |
H5 |
268.2 |
54.5 |
C4 |
C3 |
C2 |
H6 |
31.8 |
294.5 |
C3 |
C4 |
CG |
CD1 |
125.6 |
135.0 |
C3 |
C4 |
CG |
CD2 |
306.0 |
314.7 |
CG |
C4 |
C3 |
H9 |
239.7 |
240.1 |
H7 |
C3 |
C4 |
H8 |
241.4 |
120.1 |
H5 |
C2 |
C3 |
H6 |
236.4 |
120.0 |
PA1 |
C4 |
CG |
H9 |
242.4 |
240.0 |
CG |
C4 |
C3 |
H7 |
62.7 |
66.0 |
CG |
C4 |
C3 |
H8 |
181.3 |
306.0 |
C3 |
C4 |
CG |
H9 |
120.8 |
120.0 |
CD1 |
CG |
C4 |
CD2 |
179.6 |
180.3 |
C4 |
CG |
CD1 |
CE1 |
180.4 |
180.0 |
C4 |
CG |
CD1 |
H12 |
0.4 |
0.0 |
C4 |
CG |
CD2 |
CE2 |
179.5 |
180.0 |
C4 |
CG |
CD2 |
H13 |
359.6 |
360.0 |
O2 |
N1 |
C1 |
O1 |
358.6 |
180.0 |
C2 |
N1 |
O2 |
H4 |
180.8 |
359.9 |
C1 |
N1 |
O2 |
H4 |
0.7 |
180.0 |
N1 |
C1 |
CH3 |
H1 |
179.1 |
90.0 |
N1 |
C1 |
CH3 |
H2 |
299.1 |
210.0 |
N1 |
C1 |
CH3 |
H3 |
59.1 |
330.0 |
C4 |
CG |
CD1 |
CD2 |
180.4 |
179.7 |
CD1 |
CG |
C4 |
H9 |
4.8 |
15.0 |
CD1 |
CG |
CD2 |
CE2 |
359.9 |
359.8 |
CD1 |
CG |
CD2 |
H13 |
180.0 |
179.7 |
CG |
CD1 |
CE1 |
NZ |
0.1 |
0.0 |
CE1 |
CD1 |
CG |
H12 |
180.0 |
180.0 |
CG |
CD1 |
CE1 |
H14 |
180.1 |
180.0 |
C4 |
CG |
CD2 |
CD1 |
179.6 |
180.3 |
CD2 |
CG |
C4 |
H9 |
185.2 |
194.7 |
CD2 |
CG |
CD1 |
CE1 |
0.0 |
0.3 |
CD2 |
CG |
CD1 |
H12 |
180.0 |
180.3 |
CG |
CD2 |
CE2 |
NZ |
0.0 |
359.9 |
CE2 |
CD2 |
CG |
H13 |
180.0 |
180.1 |
CG |
CD2 |
CE2 |
H15 |
180.0 |
180.0 |
CE1 |
CD1 |
CG |
CD2 |
0.0 |
0.3 |
CG |
CD1 |
CE1 |
H12 |
180.0 |
180.0 |
CD1 |
CE1 |
NZ |
CE2 |
359.9 |
359.6 |
NZ |
CE1 |
CD1 |
H14 |
180.0 |
180.0 |
CG |
CD2 |
CE2 |
H13 |
180.0 |
179.9 |
CE1 |
NZ |
CE2 |
CD2 |
0.0 |
0.4 |
NZ |
CE2 |
CD2 |
H15 |
180.0 |
179.9 |
O1 |
C1 |
CH3 |
H1 |
360.0 |
270.0 |
O1 |
C1 |
CH3 |
H2 |
120.0 |
30.0 |
O1 |
C1 |
CH3 |
H3 |
240.0 |
150.0 |
H1 |
CH3 |
C1 |
H2 |
240.0 |
240.0 |
H1 |
CH3 |
C1 |
H3 |
120.0 |
120.0 |
H2 |
CH3 |
C1 |
H3 |
240.0 |
240.0 |
NZ |
CE1 |
CD1 |
H12 |
180.0 |
180.0 |
CD1 |
CE1 |
NZ |
H14 |
180.0 |
180.0 |
CD2 |
CE2 |
NZ |
CE1 |
0.0 |
0.4 |
CE1 |
NZ |
CE2 |
H15 |
180.0 |
180.3 |
NZ |
CE2 |
CD2 |
H13 |
180.0 |
180.0 |
CD2 |
CE2 |
NZ |
H15 |
180.0 |
180.1 |
CE2 |
NZ |
CE1 |
H14 |
179.9 |
179.6 |
C1 |
CH3 |
H1 |
H2 |
120.0 |
120.0 |
C1 |
CH3 |
H1 |
H3 |
240.0 |
240.1 |
H2 |
CH3 |
H1 |
H3 |
120.0 |
120.0 |
C1 |
CH3 |
H2 |
H1 |
240.0 |
240.0 |
C1 |
CH3 |
H2 |
H3 |
120.0 |
119.9 |
H1 |
CH3 |
H2 |
H3 |
240.0 |
240.0 |
C1 |
CH3 |
H3 |
H1 |
120.0 |
120.0 |
C1 |
CH3 |
H3 |
H2 |
240.0 |
240.0 |
H1 |
CH3 |
H3 |
H2 |
120.0 |
120.0 |
H4 |
O2 |
N1 |
C1 |
0.7 |
180.0 |
C3 |
C2 |
H5 |
H6 |
125.1 |
240.0 |
C3 |
C2 |
H6 |
H5 |
235.0 |
120.0 |
H7 |
C3 |
C4 |
CG |
62.7 |
66.0 |
C4 |
C3 |
H7 |
H8 |
117.9 |
240.0 |
H7 |
C3 |
C4 |
H9 |
183.0 |
186.0 |
H7 |
C3 |
C2 |
H5 |
147.5 |
174.5 |
H7 |
C3 |
C2 |
H6 |
271.1 |
54.5 |
H8 |
C3 |
C4 |
CG |
181.3 |
306.0 |
C4 |
C3 |
H8 |
H7 |
242.1 |
120.1 |
H8 |
C3 |
C4 |
H9 |
301.6 |
65.9 |
H8 |
C3 |
C2 |
H5 |
28.9 |
294.5 |
H8 |
C3 |
C2 |
H6 |
152.5 |
174.5 |
PA1 |
C4 |
H9 |
CG |
120.1 |
120.0 |
C3 |
C4 |
H9 |
CG |
238.5 |
240.0 |
H9 |
C4 |
C3 |
H7 |
183.0 |
186.0 |
H9 |
C4 |
C3 |
H8 |
301.6 |
65.9 |
H9 |
C4 |
CG |
CD1 |
4.8 |
15.0 |
H9 |
C4 |
CG |
CD2 |
185.2 |
194.7 |
H12 |
CD1 |
CG |
CD2 |
180.0 |
180.3 |
CG |
CD1 |
H12 |
CE1 |
180.0 |
180.0 |
H12 |
CD1 |
CE1 |
NZ |
180.0 |
180.0 |
H12 |
CD1 |
CE1 |
H14 |
0.1 |
0.0 |
CG |
CD2 |
H13 |
CE2 |
180.0 |
180.1 |
H13 |
CD2 |
CE2 |
NZ |
180.0 |
180.0 |
H13 |
CD2 |
CE2 |
H15 |
0.0 |
0.1 |
CD1 |
CE1 |
H14 |
NZ |
180.0 |
180.0 |
H14 |
CE1 |
CD1 |
H12 |
0.1 |
0.0 |
H14 |
CE1 |
NZ |
CE2 |
179.9 |
179.6 |
CD2 |
CE2 |
H15 |
NZ |
180.0 |
179.9 |
H15 |
CE2 |
CD2 |
H13 |
0.0 |
0.1 |