PDB Chemical Component FOB

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for FOB

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
OP2 PA1 1.506 1.480
OP3 PA1 1.503 1.610
PA1 OP1 1.491 1.610
PA1 C4 1.728 1.823
C3 C4 1.503 1.530
C3 C2 1.541 1.530
C4 CG 1.564 1.507
O2 N1 1.407 1.416
C2 N1 1.459 1.465
N1 C1 1.298 1.347
CG CD1 1.411 1.387
CG CD2 1.429 1.387
CD1 CE1 1.403 1.382
CD2 CE2 1.404 1.382
C1 O1 1.219 1.213
C1 CH3 1.509 1.507
CE1 NZ 1.348 1.318
CE2 NZ 1.344 1.319
CH3 H1 1.100 1.090
CH3 H2 1.100 1.090
CH3 H3 1.100 1.090
O2 H4 0.950 0.967
C2 H5 1.100 1.090
C2 H6 1.100 1.091
C3 H7 1.100 1.089
C3 H8 1.100 1.090
C4 H9 1.100 1.090
OP1 H10 0.950 0.967
OP3 H11 0.950 0.967
CD1 H12 1.080 1.080
CD2 H13 1.080 1.079
CE1 H14 1.080 1.080
CE2 H15 1.079 1.081

Bond Angles for FOB

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
PA1 OP1 H10 109.5 114.0
PA1 C4 CG 111.0 109.5
PA1 C4 H9 107.1 109.5
C3 C4 CG 110.9 109.4
C4 C3 H7 108.3 109.5
C4 C3 H8 108.3 109.5
C3 C4 H9 109.7 109.5
C3 C2 H5 112.1 109.5
C3 C2 H6 112.1 109.5
C4 CG CD1 118.8 120.8
C4 CG CD2 122.6 120.8
CG C4 H9 108.9 109.4
O2 N1 C1 119.2 120.0
N1 O2 H4 109.5 114.0
N1 C1 O1 116.8 120.0
CD1 CG CD2 118.6 118.4
CG CD1 CE1 119.1 119.2
CG CD1 H12 120.5 120.4
CG CD2 CE2 119.1 119.1
CG CD2 H13 120.4 120.4
CD1 CE1 NZ 120.5 120.8
CE1 CD1 H12 120.4 120.5
CD1 CE1 H14 119.7 119.6
CD2 CE2 NZ 120.1 120.8
CE2 CD2 H13 120.5 120.5
CD2 CE2 H15 120.0 119.6
C1 CH3 H1 109.5 109.5
C1 CH3 H2 109.5 109.5
C1 CH3 H3 109.5 109.4
CE1 NZ CE2 122.7 121.8
NZ CE1 H14 119.8 119.7
NZ CE2 H15 120.0 119.6
H1 CH3 H2 109.5 109.5
H1 CH3 H3 109.4 109.5
H2 CH3 H3 109.5 109.5
H5 C2 H6 109.5 109.4
H7 C3 H8 109.5 109.5

Torsion Angles for FOB

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
OP2 PA1 OP1 H10 360.0 180.0
OP2 PA1 C4 CG 198.0 177.2
OP2 PA1 C4 H9 79.2 57.2
OP3 PA1 OP1 H10 129.6 60.0
OP3 PA1 C4 CG 80.0 297.2
OP3 PA1 C4 H9 321.3 177.2
OP1 PA1 C4 CG 319.2 57.2
OP1 PA1 C4 H9 200.4 297.2
C3 C4 PA1 CG 122.6 120.0
PA1 C4 C3 H7 300.1 306.0
PA1 C4 C3 H8 58.7 186.0
C3 C4 PA1 H9 241.3 239.9
PA1 C4 CG CD1 247.2 255.0
PA1 C4 CG CD2 67.6 74.7
CG C4 PA1 H9 118.8 120.0
PA1 C4 C3 CG 237.4 240.0
PA1 C4 C3 H9 117.0 120.1
C4 C3 C2 H5 268.2 54.5
C4 C3 C2 H6 31.8 294.5
C3 C4 CG CD1 125.6 135.0
C3 C4 CG CD2 306.0 314.7
CG C4 C3 H9 239.7 240.1
H7 C3 C4 H8 241.4 120.1
H5 C2 C3 H6 236.4 120.0
PA1 C4 CG H9 242.4 240.0
CG C4 C3 H7 62.7 66.0
CG C4 C3 H8 181.3 306.0
C3 C4 CG H9 120.8 120.0
CD1 CG C4 CD2 179.6 180.3
C4 CG CD1 CE1 180.4 180.0
C4 CG CD1 H12 0.4 0.0
C4 CG CD2 CE2 179.5 180.0
C4 CG CD2 H13 359.6 360.0
O2 N1 C1 O1 358.6 180.0
C2 N1 O2 H4 180.8 359.9
C1 N1 O2 H4 0.7 180.0
N1 C1 CH3 H1 179.1 90.0
N1 C1 CH3 H2 299.1 210.0
N1 C1 CH3 H3 59.1 330.0
C4 CG CD1 CD2 180.4 179.7
CD1 CG C4 H9 4.8 15.0
CD1 CG CD2 CE2 359.9 359.8
CD1 CG CD2 H13 180.0 179.7
CG CD1 CE1 NZ 0.1 0.0
CE1 CD1 CG H12 180.0 180.0
CG CD1 CE1 H14 180.1 180.0
C4 CG CD2 CD1 179.6 180.3
CD2 CG C4 H9 185.2 194.7
CD2 CG CD1 CE1 0.0 0.3
CD2 CG CD1 H12 180.0 180.3
CG CD2 CE2 NZ 0.0 359.9
CE2 CD2 CG H13 180.0 180.1
CG CD2 CE2 H15 180.0 180.0
CE1 CD1 CG CD2 0.0 0.3
CG CD1 CE1 H12 180.0 180.0
CD1 CE1 NZ CE2 359.9 359.6
NZ CE1 CD1 H14 180.0 180.0
CG CD2 CE2 H13 180.0 179.9
CE1 NZ CE2 CD2 0.0 0.4
NZ CE2 CD2 H15 180.0 179.9
O1 C1 CH3 H1 360.0 270.0
O1 C1 CH3 H2 120.0 30.0
O1 C1 CH3 H3 240.0 150.0
H1 CH3 C1 H2 240.0 240.0
H1 CH3 C1 H3 120.0 120.0
H2 CH3 C1 H3 240.0 240.0
NZ CE1 CD1 H12 180.0 180.0
CD1 CE1 NZ H14 180.0 180.0
CD2 CE2 NZ CE1 0.0 0.4
CE1 NZ CE2 H15 180.0 180.3
NZ CE2 CD2 H13 180.0 180.0
CD2 CE2 NZ H15 180.0 180.1
CE2 NZ CE1 H14 179.9 179.6
C1 CH3 H1 H2 120.0 120.0
C1 CH3 H1 H3 240.0 240.1
H2 CH3 H1 H3 120.0 120.0
C1 CH3 H2 H1 240.0 240.0
C1 CH3 H2 H3 120.0 119.9
H1 CH3 H2 H3 240.0 240.0
C1 CH3 H3 H1 120.0 120.0
C1 CH3 H3 H2 240.0 240.0
H1 CH3 H3 H2 120.0 120.0
H4 O2 N1 C1 0.7 180.0
C3 C2 H5 H6 125.1 240.0
C3 C2 H6 H5 235.0 120.0
H7 C3 C4 CG 62.7 66.0
C4 C3 H7 H8 117.9 240.0
H7 C3 C4 H9 183.0 186.0
H7 C3 C2 H5 147.5 174.5
H7 C3 C2 H6 271.1 54.5
H8 C3 C4 CG 181.3 306.0
C4 C3 H8 H7 242.1 120.1
H8 C3 C4 H9 301.6 65.9
H8 C3 C2 H5 28.9 294.5
H8 C3 C2 H6 152.5 174.5
PA1 C4 H9 CG 120.1 120.0
C3 C4 H9 CG 238.5 240.0
H9 C4 C3 H7 183.0 186.0
H9 C4 C3 H8 301.6 65.9
H9 C4 CG CD1 4.8 15.0
H9 C4 CG CD2 185.2 194.7
H12 CD1 CG CD2 180.0 180.3
CG CD1 H12 CE1 180.0 180.0
H12 CD1 CE1 NZ 180.0 180.0
H12 CD1 CE1 H14 0.1 0.0
CG CD2 H13 CE2 180.0 180.1
H13 CD2 CE2 NZ 180.0 180.0
H13 CD2 CE2 H15 0.0 0.1
CD1 CE1 H14 NZ 180.0 180.0
H14 CE1 CD1 H12 0.1 0.0
H14 CE1 NZ CE2 179.9 179.6
CD2 CE2 H15 NZ 180.0 179.9
H15 CE2 CD2 H13 0.0 0.1