PDB Chemical Component FNU
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for FNU
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| P |
O2P |
1.519 |
1.610 |
| N1 |
C6 |
1.346 |
1.375 |
| N1 |
C2 |
1.332 |
1.346 |
| C2 |
N2 |
1.359 |
1.345 |
| N2 |
C4 |
1.346 |
1.348 |
| N2 |
HN2 |
1.000 |
0.970 |
| O2 |
C2 |
1.328 |
1.216 |
| N3 |
C6 |
1.348 |
1.374 |
| N3 |
HN3 |
1.000 |
0.969 |
| N3 |
H14 |
1.000 |
0.970 |
| C4 |
O4 |
1.334 |
1.219 |
| C5 |
C4 |
1.387 |
1.404 |
| C5 |
F24 |
1.490 |
1.352 |
| C6 |
C5 |
1.368 |
1.367 |
| C1' |
N1 |
1.476 |
1.465 |
| C1' |
C2' |
1.536 |
1.550 |
| C1' |
H1' |
1.100 |
1.090 |
| O1P |
P |
1.515 |
1.480 |
| C2' |
O2' |
1.433 |
1.429 |
| C2' |
H2' |
1.100 |
1.091 |
| O2' |
HO2' |
0.950 |
0.967 |
| O2P |
HO2P |
0.950 |
0.967 |
| C3' |
C2' |
1.529 |
1.548 |
| C3' |
H3' |
1.100 |
1.090 |
| O3' |
C3' |
1.427 |
1.429 |
| O3' |
HO3' |
0.950 |
0.967 |
| O3P |
P |
1.526 |
1.611 |
| O3P |
HO3P |
0.950 |
0.967 |
| C4' |
C3' |
1.533 |
1.540 |
| C4' |
O4' |
1.415 |
1.437 |
| C4' |
C5' |
1.518 |
1.530 |
| C4' |
H4' |
1.101 |
1.091 |
| O4' |
C1' |
1.449 |
1.443 |
| C5' |
H5' |
1.100 |
1.090 |
| C5' |
H5'A |
1.100 |
1.090 |
| O5' |
P |
1.608 |
1.610 |
| O5' |
C5' |
1.413 |
1.429 |
Bond Angles for FNU
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O1P |
P |
O2P |
112.6 |
109.5 |
| P |
O2P |
HO2P |
109.5 |
114.0 |
| C2 |
N1 |
C6 |
117.3 |
120.4 |
| N1 |
C6 |
N3 |
120.2 |
120.3 |
| N1 |
C6 |
C5 |
122.8 |
119.4 |
| N1 |
C2 |
N2 |
124.6 |
121.0 |
| C2 |
N2 |
C4 |
116.3 |
120.6 |
| C2 |
N2 |
HN2 |
121.8 |
119.8 |
| C4 |
N2 |
HN2 |
121.8 |
119.7 |
| N2 |
C4 |
O4 |
118.3 |
120.2 |
| C6 |
N3 |
HN3 |
109.5 |
120.0 |
| C6 |
N3 |
H14 |
109.4 |
119.9 |
| N3 |
C6 |
C5 |
117.0 |
120.3 |
| HN3 |
N3 |
H14 |
109.5 |
120.0 |
| C6 |
C5 |
F24 |
119.8 |
120.4 |
| C2' |
C1' |
H1' |
110.3 |
110.6 |
| C1' |
C2' |
O2' |
114.7 |
111.0 |
| C1' |
C2' |
H2' |
114.1 |
110.9 |
| O4' |
C1' |
H1' |
112.6 |
110.8 |
| O2' |
C2' |
H2' |
99.8 |
110.8 |
| C2' |
O2' |
HO2' |
109.5 |
114.0 |
| C3' |
C2' |
H2' |
114.4 |
110.9 |
| O3' |
C3' |
H3' |
107.6 |
110.4 |
| C4' |
C3' |
H3' |
114.1 |
110.5 |
| O4' |
C4' |
C5' |
111.3 |
109.9 |
| O4' |
C4' |
H4' |
112.3 |
109.9 |
| C5' |
C4' |
H4' |
105.2 |
110.0 |
| C4' |
C5' |
H5' |
111.1 |
109.4 |
| C4' |
C5' |
H5'A |
111.1 |
109.5 |
| H5' |
C5' |
H5'A |
107.8 |
109.5 |
| O5' |
C5' |
H5' |
111.1 |
109.5 |
| O5' |
C5' |
H5'A |
111.1 |
109.5 |
Torsion Angles for FNU
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C6 |
N1 |
C2 |
N2 |
359.7 |
0.1 |
| N1 |
C6 |
N3 |
HN3 |
180.0 |
5.0 |
| N1 |
C6 |
N3 |
H14 |
300.0 |
185.1 |
| N3 |
C6 |
N1 |
C5 |
180.5 |
180.1 |
| N1 |
C6 |
C5 |
F24 |
189.1 |
180.1 |
| C2 |
N1 |
C6 |
N3 |
181.2 |
180.0 |
| C2 |
N1 |
C6 |
C5 |
0.7 |
359.9 |
| N1 |
C2 |
N2 |
C4 |
358.4 |
0.0 |
| N1 |
C2 |
N2 |
HN2 |
178.4 |
180.0 |
| N2 |
C2 |
N1 |
C6 |
359.7 |
0.1 |
| C4 |
N2 |
C2 |
HN2 |
180.0 |
180.0 |
| C2 |
N2 |
C4 |
O4 |
180.5 |
180.0 |
| C2 |
N2 |
C4 |
HN2 |
180.0 |
180.0 |
| C2 |
N2 |
HN2 |
C4 |
180.0 |
180.0 |
| HN2 |
N2 |
C4 |
O4 |
0.5 |
0.0 |
| O2 |
C2 |
N1 |
C6 |
179.4 |
180.0 |
| O2 |
C2 |
N2 |
C4 |
178.7 |
180.1 |
| O2 |
C2 |
N2 |
HN2 |
358.7 |
0.1 |
| N1 |
C6 |
N3 |
C5 |
179.5 |
179.9 |
| HN3 |
N3 |
C6 |
H14 |
240.0 |
179.9 |
| N3 |
C6 |
C5 |
F24 |
8.6 |
0.0 |
| C6 |
N3 |
HN3 |
H14 |
120.0 |
180.1 |
| HN3 |
N3 |
C6 |
C5 |
0.5 |
185.1 |
| C6 |
N3 |
H14 |
HN3 |
240.0 |
179.9 |
| H14 |
N3 |
C6 |
C5 |
120.5 |
5.2 |
| O4 |
C4 |
N2 |
HN2 |
0.5 |
0.0 |
| N1 |
C6 |
C5 |
C4 |
0.8 |
0.1 |
| C5 |
C4 |
N2 |
HN2 |
183.3 |
180.0 |
| N3 |
C6 |
C5 |
C4 |
180.3 |
180.0 |
| N1 |
C6 |
C5 |
N3 |
180.5 |
180.1 |
| C5 |
C6 |
N3 |
HN3 |
0.5 |
185.1 |
| C5 |
C6 |
N3 |
H14 |
120.5 |
5.2 |
| O4' |
C1' |
C2' |
H1' |
121.6 |
118.7 |
| O2' |
C2' |
C1' |
H2' |
245.8 |
236.4 |
| C1' |
C2' |
O2' |
HO2' |
180.0 |
180.0 |
| C3' |
C2' |
C1' |
H2' |
122.7 |
118.2 |
| H1' |
C1' |
C2' |
O2' |
34.4 |
36.5 |
| H1' |
C1' |
C2' |
H2' |
148.6 |
160.2 |
| O1P |
P |
O2P |
HO2P |
360.0 |
59.9 |
| O2' |
C2' |
C1' |
H1' |
34.4 |
36.5 |
| C1' |
C2' |
O2' |
H2' |
122.3 |
123.6 |
| C3' |
C2' |
O2' |
H2' |
237.4 |
236.4 |
| H2' |
C2' |
C1' |
H1' |
148.6 |
160.2 |
| C1' |
C2' |
H2' |
O2' |
237.2 |
236.3 |
| H2' |
C2' |
O2' |
HO2' |
57.6 |
56.4 |
| HO2' |
O2' |
C2' |
H2' |
57.6 |
56.4 |
| C3' |
C2' |
C1' |
H1' |
271.3 |
278.3 |
| C1' |
C2' |
C3' |
H2' |
237.5 |
241.9 |
| O2' |
C2' |
C3' |
H2' |
114.3 |
123.6 |
| C3' |
C2' |
O2' |
HO2' |
295.1 |
292.7 |
| H3' |
C3' |
C2' |
H2' |
319.1 |
338.6 |
| O3' |
C3' |
C2' |
H2' |
198.6 |
216.1 |
| C4' |
C3' |
O3' |
H3' |
235.6 |
237.4 |
| HO3' |
O3' |
C3' |
H3' |
55.7 |
299.0 |
| O3P |
P |
O2P |
HO2P |
229.6 |
299.9 |
| C4' |
C3' |
C2' |
H2' |
82.8 |
97.3 |
| O3' |
C3' |
C4' |
H3' |
120.5 |
122.6 |
| C4' |
O4' |
C1' |
H1' |
106.8 |
78.5 |
| O4' |
C4' |
C3' |
H3' |
156.8 |
116.7 |
| C5' |
C4' |
O4' |
H4' |
242.4 |
238.9 |
| O4' |
C4' |
C5' |
H5' |
282.7 |
187.1 |
| O4' |
C4' |
C5' |
H5'A |
42.7 |
307.1 |
| C5' |
C4' |
C3' |
H3' |
36.1 |
357.3 |
| O4' |
C4' |
C5' |
H4' |
121.8 |
121.1 |
| H5' |
C5' |
C4' |
H5'A |
240.0 |
240.0 |
| O5' |
C5' |
C4' |
H5' |
240.0 |
240.0 |
| O5' |
C5' |
C4' |
H5'A |
120.0 |
120.0 |
| H4' |
C4' |
C3' |
H3' |
278.5 |
236.1 |
| O4' |
C4' |
H4' |
C5' |
238.8 |
238.9 |
| H4' |
C4' |
C5' |
H5' |
160.9 |
66.1 |
| H4' |
C4' |
C5' |
H5'A |
280.9 |
186.1 |
| C2' |
C1' |
O4' |
H1' |
239.9 |
241.5 |
| O4' |
C1' |
C2' |
H2' |
270.3 |
278.8 |
| H5' |
C5' |
C4' |
H4' |
160.9 |
66.1 |
| C4' |
C5' |
H5' |
H5'A |
121.9 |
120.0 |
| O5' |
C5' |
H5' |
H5'A |
238.1 |
239.9 |
| H5'A |
C5' |
C4' |
H4' |
280.9 |
186.1 |
| C4' |
C5' |
H5'A |
H5' |
238.1 |
240.0 |
| O5' |
C5' |
H5'A |
H5' |
121.9 |
120.0 |
| O5' |
P |
O2P |
HO2P |
115.4 |
180.0 |
| O5' |
C5' |
C4' |
H4' |
40.9 |
306.1 |
| C4' |
C5' |
O5' |
H5' |
120.0 |
119.9 |
| C4' |
C5' |
O5' |
H5'A |
240.0 |
240.0 |
| H5' |
C5' |
O5' |
H5'A |
120.0 |
120.1 |