PDB Chemical Component FMP

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for FMP

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
P O1P 1.487 1.479
P O2P 1.492 1.610
P O3P 1.506 1.610
P O5' 1.555 1.609
O2P HOP2 0.951 0.967
O3P HOP3 0.951 0.967
O5' C5' 1.439 1.428
C5' C4' 1.535 1.530
C5' H5'1 1.115 1.091
C5' H5'2 1.115 1.089
C4' O4' 1.418 1.445
C4' C3' 1.541 1.545
C4' H4' 1.115 1.090
O4' C1' 1.413 1.443
C3' O3' 1.428 1.429
C3' C2' 1.510 1.545
C3' H3' 1.116 1.090
O3' HO3' 0.951 0.967
C2' O2' 1.435 1.429
C2' C1' 1.517 1.544
C2' H2' 1.115 1.090
O2' HO2' 0.949 0.967
C1' C9 1.471 1.507
C1' H1' 1.114 1.090
C9 N8 1.302 1.303
C9 C4 1.406 1.411
N8 N7 1.336 1.401
N7 C5 1.383 1.368
N7 HN7 1.020 0.970
C6 N6 1.332 1.384
C6 C5 1.404 1.402
C6 N1 1.351 1.327
N6 HN61 1.020 0.971
N6 HN62 1.020 0.970
C5 C4 1.357 1.406
C4 N3 1.369 1.339
N3 C2 1.333 1.313
C2 N1 1.331 1.322
C2 H2 1.103 1.080

Bond Angles for FMP

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O1P P O2P 114.3 109.4
O1P P O3P 115.6 109.5
O1P P O5' 102.0 109.5
O2P P O3P 114.8 109.5
O2P P O5' 106.8 109.5
P O2P HOP2 114.3 106.8
O3P P O5' 101.0 109.5
P O3P HOP3 115.5 106.7
P O5' C5' 129.5 106.8
O5' C5' C4' 108.3 109.5
O5' C5' H5'1 112.6 109.5
O5' C5' H5'2 112.7 109.5
C4' C5' H5'1 112.6 109.4
C4' C5' H5'2 112.6 109.5
C5' C4' O4' 107.8 110.4
C5' C4' C3' 114.9 110.5
C5' C4' H4' 106.2 110.3
H5'1 C5' H5'2 97.9 109.5
O4' C4' C3' 106.9 104.8
O4' C4' H4' 114.3 110.4
C4' O4' C1' 102.1 105.2
C3' C4' H4' 107.1 110.4
C4' C3' O3' 109.8 110.5
C4' C3' C2' 101.4 104.1
C4' C3' H3' 114.3 110.5
O4' C1' C2' 101.2 104.9
O4' C1' C9 105.5 110.3
O4' C1' H1' 118.8 110.4
O3' C3' C2' 109.3 110.5
O3' C3' H3' 107.1 110.4
C3' O3' HO3' 109.8 106.8
C2' C3' H3' 114.8 110.6
C3' C2' O2' 110.7 110.5
C3' C2' C1' 101.9 104.0
C3' C2' H2' 115.0 110.5
O2' C2' C1' 113.5 110.8
O2' C2' H2' 103.8 110.4
C2' O2' HO2' 110.8 106.8
C1' C2' H2' 112.3 110.4
C2' C1' C9 114.5 110.4
C2' C1' H1' 110.5 110.3
C9 C1' H1' 106.5 110.3
C1' C9 N8 125.6 125.6
C1' C9 C4 127.3 125.7
N8 C9 C4 107.0 108.7
C9 N8 N7 112.7 109.6
C9 C4 C5 105.6 106.9
C9 C4 N3 128.9 134.4
N8 N7 C5 104.8 108.0
N8 N7 HN7 126.3 126.0
C5 N7 HN7 128.9 126.0
N7 C5 C6 132.6 134.8
N7 C5 C4 109.4 106.8
N6 C6 C5 120.3 120.7
N6 C6 N1 121.4 120.7
C6 N6 HN61 120.3 120.0
C6 N6 HN62 108.3 120.0
C5 C6 N1 118.2 118.5
C6 C5 C4 117.9 118.4
C6 N1 C2 117.6 121.2
HN61 N6 HN62 108.3 120.0
C5 C4 N3 125.5 118.7
C4 N3 C2 110.7 120.6
N3 C2 N1 129.7 122.6
N3 C2 H2 115.2 118.7
N1 C2 H2 115.1 118.7

Torsion Angles for FMP

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O2P P O1P O3P 223.4 120.0
O2P P O1P O5' 114.9 240.0
O1P P O2P HOP2 180.0 300.0
O3P P O1P O5' 251.5 120.0
O1P P O3P HOP3 180.0 179.9
O1P P O5' C5' 297.8 60.0
O1P P O2P O3P 136.9 240.0
O1P P O2P O5' 248.0 120.0
O3P P O2P O5' 111.1 240.0
O2P P O3P HOP3 316.4 60.0
O2P P O5' C5' 177.5 180.0
O1P P O3P O2P 223.6 120.0
O1P P O3P O5' 109.1 240.0
O2P P O3P O5' 245.5 120.0
O3P P O2P HOP2 43.1 60.0
O3P P O5' C5' 57.2 300.0
O1P P O5' O2P 120.3 240.0
O1P P O5' O3P 240.6 120.0
O2P P O5' O3P 120.4 240.0
O5' P O2P HOP2 292.0 180.0
O5' P O3P HOP3 70.9 300.0
P O5' C5' C4' 199.5 180.0
P O5' C5' H5'1 324.7 60.0
P O5' C5' H5'2 74.3 300.0
HOP2 O2P P O3P 43.1 60.0
HOP2 O2P P O5' 292.0 180.0
HOP3 O3P P O5' 70.9 300.0
C4' C5' O5' H5'1 234.8 120.0
C4' C5' O5' H5'2 125.2 240.0
O5' C5' C4' O4' 301.1 61.5
O5' C5' C4' C3' 60.1 176.9
O5' C5' C4' H4' 178.2 299.2
H5'1 C5' O5' H5'2 250.4 120.0
O5' C5' C4' H5'1 125.2 240.0
O5' C5' C4' H5'2 234.8 120.0
H5'1 C5' C4' H5'2 109.5 240.0
O4' C4' C5' C3' 241.0 244.6
O4' C4' C5' H4' 122.9 122.3
C5' C4' O4' C1' 161.6 159.4
C3' C4' C5' H4' 241.9 237.7
C5' C4' C3' O3' 116.5 98.3
C5' C4' C3' C2' 232.0 217.1
C5' C4' C3' H3' 356.1 335.8
O5' C5' H5'1 C4' 237.2 120.0
O5' C5' H5'1 H5'2 118.6 240.0
C4' C5' H5'1 H5'2 241.4 120.0
H5'1 C5' C4' O4' 175.9 181.5
H5'1 C5' C4' C3' 294.9 296.9
H5'1 C5' C4' H4' 53.0 59.2
O5' C5' H5'2 C4' 122.8 240.0
O5' C5' H5'2 H5'1 241.4 120.0
C4' C5' H5'2 H5'1 118.6 240.0
H5'2 C5' C4' O4' 66.3 301.5
H5'2 C5' C4' C3' 185.4 56.9
H5'2 C5' C4' H4' 303.5 179.2
O4' C4' C5' H5'1 175.9 181.5
O4' C4' C5' H5'2 66.3 301.5
C5' C4' O4' C3' 124.0 119.0
C5' C4' O4' H4' 242.3 237.8
C3' C4' O4' H4' 118.3 118.8
O4' C4' C3' O3' 236.0 217.2
O4' C4' C3' C2' 351.5 335.9
O4' C4' C3' H3' 115.6 94.7
C4' O4' C1' C2' 308.7 319.6
C4' O4' C1' C9 189.1 200.6
C4' O4' C1' H1' 69.8 78.4
C3' C4' C5' H5'1 294.9 296.9
C3' C4' C5' H5'2 185.4 56.9
C5' C4' C3' O4' 240.5 241.1
C5' C4' C3' H4' 117.6 122.3
O4' C4' C3' H4' 237.1 241.2
C3' C4' O4' C1' 37.6 40.5
O3' C3' C4' C2' 244.5 241.3
O3' C3' C4' H3' 120.4 122.6
C4' C3' O3' HO3' 180.0 180.0
C2' C3' C4' H3' 235.9 241.3
C4' C3' C2' O2' 217.4 241.2
C4' C3' C2' C1' 338.5 0.1
C4' C3' C2' H2' 100.2 118.7
H4' C4' C5' H5'1 53.0 59.2
H4' C4' C5' H5'2 303.5 179.2
C5' C4' H4' O4' 118.7 122.3
C5' C4' H4' C3' 236.8 237.6
O4' C4' H4' C3' 118.2 115.4
H4' C4' O4' C1' 279.4 281.7
H4' C4' C3' O3' 358.9 336.1
H4' C4' C3' C2' 114.4 94.8
H4' C4' C3' H3' 238.5 213.5
C1' O4' C4' C3' 37.6 40.5
C1' O4' C4' H4' 279.4 281.7
C3' C2' C1' O4' 45.4 23.8
O2' C2' C1' O4' 164.5 142.6
O4' C1' C2' H2' 281.8 265.3
C2' C1' O4' C9 119.6 119.0
C2' C1' O4' H1' 238.9 241.2
C9 C1' O4' H1' 119.3 122.2
O4' C1' C9 N8 16.7 57.1
O4' C1' C9 C4 201.7 237.4
O3' C3' C4' H4' 358.9 336.1
C4' C3' O3' C2' 110.4 114.7
C4' C3' O3' H3' 235.4 237.4
C2' C3' O3' H3' 124.9 122.7
O3' C3' C2' O2' 333.3 359.9
O3' C3' C2' C1' 94.4 118.9
O3' C3' C2' H2' 216.1 237.4
C2' C3' C4' H4' 114.4 94.8
C4' C3' C2' O3' 244.1 241.3
C4' C3' C2' H3' 123.7 118.7
O4' C1' C2' C3' 45.4 23.8
O3' C3' C2' H3' 239.7 237.4
C2' C3' O3' HO3' 69.6 65.3
O2' C2' C3' C1' 239.0 241.0
O2' C2' C3' H2' 117.2 122.5
C3' C2' O2' HO2' 180.0 298.6
C1' C2' C3' H2' 238.2 241.5
C3' C2' C1' C9 158.4 142.8
C3' C2' C1' H1' 278.6 265.0
H3' C3' C4' H4' 238.5 213.5
C4' C3' H3' O3' 121.9 122.6
C4' C3' H3' C2' 243.4 245.3
O3' C3' H3' C2' 121.5 122.7
H3' C3' O3' HO3' 304.7 302.6
H3' C3' C2' O2' 93.7 122.5
H3' C3' C2' C1' 214.7 241.5
H3' C3' C2' H2' 336.5 360.0
HO3' O3' C3' C2' 69.6 65.3
HO3' O3' C3' H3' 304.7 302.6
O4' C1' C2' O2' 164.5 142.6
O2' C2' C3' H3' 93.7 122.5
C3' C2' O2' C1' 113.9 114.8
C3' C2' O2' H2' 236.1 237.4
C1' C2' O2' H2' 122.2 122.7
O2' C2' C1' C9 277.5 261.5
O2' C2' C1' H1' 37.7 23.7
O4' C1' C2' C9 247.0 241.1
O4' C1' C2' H1' 126.8 118.9
C1' C2' C3' H3' 214.7 241.5
C3' C2' C1' O2' 240.9 241.2
C3' C2' C1' H2' 123.6 118.6
O2' C2' C1' H2' 242.7 237.3
C1' C2' O2' HO2' 66.1 183.9
C9 C1' C2' H1' 239.7 237.8
C2' C1' C9 N8 266.3 301.5
C2' C1' C9 C4 91.3 121.8
H2' C2' C3' H3' 336.5 360.0
C3' C2' H2' O2' 121.1 122.6
C3' C2' H2' C1' 244.1 245.5
O2' C2' H2' C1' 123.0 122.9
H2' C2' O2' HO2' 303.9 61.2
H2' C2' C1' C9 34.8 24.2
H2' C2' C1' H1' 155.1 146.4
HO2' O2' C2' C1' 66.1 183.9
HO2' O2' C2' H2' 303.9 61.2
O4' C1' C9 C2' 110.4 115.6
O4' C1' C9 H1' 232.8 237.8
C9 C1' C2' H2' 34.8 24.2
C2' C1' C9 H1' 122.4 122.2
N8 C9 C1' C4 175.0 179.7
C1' C9 N8 N7 177.1 180.0
C1' C9 C4 C5 182.1 180.0
C1' C9 C4 N3 1.5 359.9
O4' C1' H1' C2' 243.7 244.5
O4' C1' H1' C9 118.8 122.2
H1' C1' C2' H2' 155.1 146.4
C2' C1' H1' C9 235.1 237.7
H1' C1' C9 N8 143.9 179.3
H1' C1' C9 C4 328.9 359.6
N8 C9 C1' H1' 143.9 179.3
C1' C9 N8 C4 184.1 180.2
N8 C9 C4 C5 6.3 0.3
N8 C9 C4 N3 185.7 180.1
C9 N8 N7 C5 4.7 0.2
C9 N8 N7 HN7 184.8 180.2
C4 C9 C1' H1' 328.9 359.6
C1' C9 C4 N8 175.8 179.8
C4 C9 N8 N7 353.0 359.7
N7 C5 C4 C9 356.5 359.9
C6 C5 C4 C9 174.7 180.4
C5 C4 C9 N3 180.6 180.1
C9 C4 N3 C2 181.1 180.0
N7 N8 C9 C4 353.0 359.7
C5 N7 N8 HN7 179.9 180.0
N8 N7 C5 C6 181.8 179.3
N8 N7 C5 C4 359.6 360.0
C9 C4 C5 N7 356.5 359.9
N8 N7 C5 HN7 180.1 180.0
N6 C6 C5 N7 7.7 0.5
N7 C5 C6 N1 184.4 180.1
C6 C5 N7 C4 182.2 179.4
N7 C5 C4 N3 177.0 180.0
N8 N7 HN7 C5 179.9 180.0
HN7 N7 C5 C6 1.7 359.3
HN7 N7 C5 C4 179.5 180.0
N7 C5 C6 N6 7.7 0.5
C5 C6 N6 N1 176.6 179.6
N6 C6 C5 C4 190.1 179.8
N6 C6 N1 C2 172.1 179.9
HN61 N6 C6 HN62 125.2 180.3
C9 C4 C5 C6 174.7 180.4
C6 C5 N7 HN7 1.7 359.3
N7 C5 C6 C4 177.7 180.7
N6 C6 C5 N1 183.3 180.4
C5 C6 N6 HN61 179.9 179.7
C5 C6 N6 HN62 54.7 359.4
C5 C6 N1 C2 355.5 0.3
C6 C5 C4 N3 355.2 0.5
N6 C6 N1 C5 176.6 179.6
N1 C6 N6 HN61 3.4 0.1
N1 C6 N6 HN62 238.2 179.8
N1 C6 C5 C4 6.7 359.4
N3 C2 N1 C6 359.9 0.0
C6 N1 C2 H2 180.0 179.9
HN61 N6 C6 C5 179.9 179.7
HN61 N6 C6 N1 3.4 0.1
C6 N6 HN61 HN62 234.8 179.7
HN62 N6 C6 C5 54.7 359.4
HN62 N6 C6 N1 238.2 179.8
C6 N6 HN62 HN61 132.0 180.3
C9 C4 C5 N3 179.4 179.9
C4 C5 N7 HN7 179.5 180.0
N7 C5 C4 C6 181.8 179.5
C4 C5 C6 N1 6.7 359.4
C5 C4 N3 C2 0.4 359.8
C9 C4 N3 C5 180.7 180.1
C4 N3 C2 N1 2.2 359.9
C4 N3 C2 H2 182.2 180.0
C6 N1 C2 N3 359.9 0.0
N1 C2 N3 H2 180.1 179.9
N3 C2 N1 H2 179.9 180.1
N3 C2 H2 N1 180.1 179.9