PDB Chemical Component FM2

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for FM2

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N1 C2 1.415 1.322
N1 C6 1.452 1.328
N1 C11 1.432 1.465
C2 N3 1.362 1.312
C2 H2 1.103 1.080
N3 C4 1.404 1.339
C4 C5 1.412 1.405
C4 C9 1.391 1.412
C5 C6 1.440 1.403
C5 N7 1.379 1.368
C6 N6 1.257 1.383
N6 HN61 1.020 0.971
N6 HN62 1.020 0.970
N7 N8 1.306 1.401
N7 H7 1.020 0.970
N8 C9 1.385 1.303
C9 C1' 1.541 1.507
C1' C2' 1.561 1.544
C1' O4' 1.443 1.444
C1' H1' 1.115 1.090
C2' O2' 1.419 1.429
C2' C3' 1.574 1.546
C2' H2' 1.115 1.090
O2' HO2' 0.950 0.967
C3' O3' 1.439 1.429
C3' C4' 1.512 1.545
C3' H3' 1.115 1.090
O3' HO3' 0.950 0.967
C4' O4' 1.467 1.444
C4' C5' 1.569 1.530
C4' H4' 1.115 1.090
C5' O5' 1.431 1.428
C5' H5'1 1.115 1.090
C5' H5'2 1.115 1.090
O5' HO5' 0.950 0.967
C11 H111 1.115 1.091
C11 H112 1.116 1.090
C11 H113 1.115 1.090

Bond Angles for FM2

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 N1 C6 125.4 121.3
C2 N1 C11 115.5 119.4
N1 C2 N3 121.9 122.5
N1 C2 H2 121.0 118.7
C6 N1 C11 119.0 119.4
N1 C6 C5 112.4 118.5
N1 C6 N6 120.9 120.7
N1 C11 H111 110.0 109.5
N1 C11 H112 115.6 109.5
N1 C11 H113 110.0 109.5
N3 C2 H2 117.1 118.7
C2 N3 C4 113.4 120.6
N3 C4 C5 128.4 118.8
N3 C4 C9 126.2 134.4
C5 C4 C9 105.4 106.8
C4 C5 C6 118.5 118.4
C4 C5 N7 110.6 106.8
C4 C9 N8 104.8 108.7
C4 C9 C1' 137.9 125.6
C6 C5 N7 130.9 134.8
C5 C6 N6 126.6 120.8
C5 N7 N8 104.3 108.0
C5 N7 H7 129.9 126.1
C6 N6 HN61 108.1 120.0
C6 N6 HN62 120.9 120.0
HN61 N6 HN62 108.1 120.0
N8 N7 H7 125.8 126.0
N7 N8 C9 114.9 109.6
N8 C9 C1' 117.3 125.6
C9 C1' C2' 116.9 110.4
C9 C1' O4' 106.0 110.4
C9 C1' H1' 106.1 110.3
C2' C1' O4' 106.6 104.9
C2' C1' H1' 105.4 110.3
C1' C2' O2' 110.0 110.8
C1' C2' C3' 103.5 104.0
C1' C2' H2' 114.8 110.4
O4' C1' H1' 116.4 110.4
C1' O4' C4' 110.4 105.3
O2' C2' C3' 114.2 110.6
O2' C2' H2' 104.1 110.4
C2' O2' HO2' 110.0 106.8
C3' C2' H2' 110.6 110.5
C2' C3' O3' 113.7 110.5
C2' C3' C4' 105.5 104.1
C2' C3' H3' 109.8 110.6
O3' C3' C4' 110.8 110.5
O3' C3' H3' 104.4 110.5
C3' O3' HO3' 113.7 106.8
C4' C3' H3' 112.8 110.5
C3' C4' O4' 103.8 104.8
C3' C4' C5' 112.3 110.5
C3' C4' H4' 112.3 110.4
O4' C4' C5' 112.0 110.4
O4' C4' H4' 112.6 110.4
C5' C4' H4' 104.1 110.3
C4' C5' O5' 111.4 109.4
C4' C5' H5'1 111.5 109.5
C4' C5' H5'2 111.5 109.5
O5' C5' H5'1 111.5 109.5
O5' C5' H5'2 111.5 109.5
C5' O5' HO5' 111.4 106.8
H5'1 C5' H5'2 98.9 109.4
H111 C11 H112 110.0 109.4
H111 C11 H113 100.2 109.4
H112 C11 H113 110.0 109.5

Torsion Angles for FM2

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 N1 C2 C11 183.8 180.2
C2 N1 C6 C5 0.7 359.5
C2 N1 C6 N6 180.1 180.0
C2 N1 C11 H111 54.7 90.0
C2 N1 C11 H112 180.0 209.9
C2 N1 C11 H113 305.3 330.0
N3 C2 N1 H2 180.0 179.9
N1 C2 N3 C4 0.8 0.1
C2 N1 C6 C11 176.0 179.8
C6 N1 C2 N3 358.7 0.2
C6 N1 C2 H2 178.7 180.3
C6 N1 C11 H111 231.2 269.7
C6 N1 C11 H112 356.4 29.7
C6 N1 C11 H113 121.7 149.8
C4 C5 C6 N1 0.3 0.5
N1 C6 C5 N7 179.6 180.2
C5 C6 N1 N6 180.6 179.5
N1 C6 N6 HN61 54.7 179.5
N1 C6 N6 HN62 180.0 359.5
C2 N1 C11 C6 183.6 180.2
C11 N1 C2 N3 174.9 180.0
C11 N1 C2 H2 354.9 0.1
C11 N1 C6 C5 184.6 179.8
C11 N1 C6 N6 4.1 0.2
H111 C11 N1 H112 234.7 240.0
H111 C11 N1 H113 109.5 120.0
H112 C11 N1 H113 234.7 239.9
N3 C2 N1 C6 358.7 0.2
N3 C2 N1 C11 174.9 180.0
N1 C2 N3 H2 180.0 180.1
C2 N3 C4 C5 0.2 359.9
C2 N3 C4 C9 180.9 180.0
H2 C2 N1 C6 178.7 180.3
H2 C2 N1 C11 354.9 0.1
N1 C2 H2 N3 180.0 179.9
H2 C2 N3 C4 180.8 180.0
C4 N3 C2 H2 180.8 180.0
C5 C4 N3 C9 179.3 179.9
N3 C4 C5 C6 359.2 359.8
N3 C4 C5 N7 179.8 180.0
N3 C4 C9 N8 180.2 180.0
N3 C4 C9 C1' 1.3 359.9
N1 C6 C5 C4 0.3 0.5
N3 C4 C5 C9 180.6 180.1
C5 C4 C9 N8 0.8 0.0
C5 C4 C9 C1' 181.9 180.0
C6 C5 C4 N7 179.5 179.8
C4 C5 C6 N6 180.9 180.0
C4 C5 N7 N8 0.5 360.0
C4 C5 N7 H7 180.5 180.0
N3 C4 C9 C5 179.4 179.9
C9 C4 C5 C6 178.6 179.7
C9 C4 C5 N7 359.1 360.0
N7 N8 C9 C4 359.4 360.0
N8 C9 C4 C1' 179.0 180.0
C4 C9 C1' C2' 0.5 106.5
C4 C9 C1' O4' 119.1 222.1
C4 C9 C1' H1' 243.4 344.3
C5 C6 N1 C11 184.6 179.8
N1 C6 C5 N6 179.4 180.5
C6 C5 C4 C9 178.6 179.7
C4 C5 C6 N7 180.7 180.3
C6 C5 N7 N8 181.1 180.3
C6 C5 N7 H7 1.1 0.3
C5 C6 N6 HN61 234.1 0.0
C5 C6 N6 HN62 359.3 180.0
N7 C5 C4 C9 359.1 360.0
C4 C5 N7 C6 179.4 179.7
N7 C5 C6 N6 0.2 359.7
N8 N7 C5 H7 180.0 180.0
C5 N7 N8 C9 0.0 0.0
N6 C6 N1 C11 4.1 0.2
N1 C6 N6 C5 180.6 179.5
N6 C6 C5 N7 0.2 359.7
HN61 N6 C6 HN62 234.7 180.0
C6 N6 HN61 HN62 132.5 180.0
C6 N6 HN62 HN61 234.8 180.0
C4 C9 N8 N7 359.4 360.0
C5 N7 N8 H7 180.0 180.0
N7 N8 C9 C1' 178.7 180.0
C5 N7 H7 N8 180.0 180.0
H7 N7 N8 C9 180.0 180.0
C4 C9 N8 C1' 180.8 180.0
C9 N8 N7 H7 180.0 180.0
N8 C9 C1' C2' 181.6 286.5
N8 C9 C1' O4' 300.2 42.0
N8 C9 C1' H1' 64.5 164.3
C4 C9 C1' N8 178.9 180.0
C2' C1' C9 O4' 241.5 244.5
C2' C1' C9 H1' 117.1 122.2
C9 C1' C2' O2' 239.8 261.5
C9 C1' C2' C3' 117.4 142.7
C9 C1' C2' H2' 356.8 24.2
O4' C1' C9 H1' 235.7 237.8
C9 C1' O4' C4' 255.6 200.6
C9 C1' C2' O4' 118.2 118.9
C9 C1' C2' H1' 242.5 237.8
O4' C1' C2' H1' 124.3 118.9
C2' C1' O4' C4' 20.7 319.6
O2' C2' C1' C3' 122.4 118.8
O2' C2' C1' H2' 243.0 237.3
C1' C2' O2' HO2' 180.0 183.8
C3' C2' C1' H2' 120.6 118.5
C1' C2' C3' O3' 103.4 118.8
C1' C2' C3' C4' 341.8 0.2
C1' C2' C3' H3' 220.0 241.5
C9 C1' O4' C2' 234.9 241.1
C9 C1' O4' H1' 117.6 122.2
C2' C1' O4' H1' 242.8 241.2
O4' C1' C2' O2' 121.6 142.6
O4' C1' C2' C3' 359.2 23.8
O4' C1' C2' H2' 238.6 265.3
C3' C4' O4' C1' 327.6 40.5
C1' O4' C4' C5' 88.9 159.4
C1' O4' C4' H4' 205.8 281.7
C9 C1' H1' C2' 124.6 122.3
C9 C1' H1' O4' 242.4 237.7
C2' C1' H1' O4' 117.9 115.5
H1' C1' C2' O2' 357.3 23.7
H1' C1' C2' C3' 234.9 264.9
H1' C1' C2' H2' 114.3 146.4
H1' C1' O4' C4' 138.0 78.4
O2' C2' C1' O4' 121.6 142.6
O2' C2' C1' H1' 357.3 23.7
C1' C2' O2' C3' 244.2 245.2
C1' C2' O2' H2' 123.5 122.6
C3' C2' O2' H2' 239.3 237.4
O2' C2' C3' O3' 343.9 359.8
O2' C2' C3' C4' 222.3 241.2
O2' C2' C3' H3' 100.4 122.5
C3' C2' C1' O4' 359.2 23.8
C3' C2' C1' H1' 234.9 264.9
C1' C2' C3' O2' 119.5 119.0
C1' C2' C3' H2' 236.6 241.5
O2' C2' C3' H2' 117.1 122.6
C3' C2' O2' HO2' 295.8 298.6
O3' C3' C2' C4' 121.6 118.6
O3' C3' C2' H3' 243.4 237.4
C2' C3' O3' HO3' 180.0 183.9
C4' C3' C2' H3' 121.8 118.7
C2' C3' C4' O4' 30.3 335.9
C2' C3' C4' C5' 269.2 217.0
C2' C3' C4' H4' 152.2 94.7
H2' C2' C1' O4' 238.6 265.3
H2' C2' C1' H1' 114.3 146.4
C1' C2' H2' O2' 239.7 237.1
C1' C2' H2' C3' 116.6 114.5
O2' C2' H2' C3' 236.9 237.4
H2' C2' O2' HO2' 56.5 61.2
H2' C2' C3' O3' 226.8 237.3
H2' C2' C3' C4' 105.2 118.6
H2' C2' C3' H3' 343.4 359.9
HO2' O2' C2' C3' 295.8 298.6
HO2' O2' C2' H2' 56.5 61.2
O3' C3' C2' H2' 226.8 237.3
C2' C3' O3' C4' 241.4 245.3
C2' C3' O3' H3' 119.7 122.7
C4' C3' O3' H3' 238.3 237.4
O3' C3' C4' O4' 266.8 217.2
O3' C3' C4' C5' 145.7 98.4
O3' C3' C4' H4' 28.7 336.0
C1' O4' C4' C3' 327.6 40.5
C4' C3' C2' H2' 105.2 118.6
C2' C3' C4' O3' 123.5 118.7
C2' C3' C4' H3' 240.1 241.2
O3' C3' C4' H3' 116.7 122.6
C4' C3' O3' HO3' 298.6 298.6
O4' C4' C3' C5' 121.1 118.9
O4' C4' C3' H4' 238.1 241.2
C5' C4' C3' H4' 117.0 122.3
C3' C4' C5' O5' 160.7 181.9
C3' C4' C5' H5'1 35.4 301.9
C3' C4' C5' H5'2 285.9 61.9
H3' C3' C2' H2' 343.4 359.9
C2' C3' H3' O3' 237.7 237.3
C2' C3' H3' C4' 117.3 114.7
O3' C3' H3' C4' 239.6 237.4
H3' C3' O3' HO3' 60.3 61.1
H3' C3' C4' O4' 150.1 94.7
H3' C3' C4' C5' 29.0 335.8
H3' C3' C4' H4' 272.0 213.5
HO3' O3' C3' C4' 298.6 298.6
HO3' O3' C3' H3' 60.3 61.1
C4' O4' C1' H1' 138.0 78.4
O4' C4' C3' H3' 150.1 94.7
C3' C4' O4' C5' 238.7 241.1
C3' C4' O4' H4' 121.7 118.8
C5' C4' O4' H4' 243.0 237.7
O4' C4' C5' O5' 44.4 66.5
O4' C4' C5' H5'1 279.1 186.5
O4' C4' C5' H5'2 169.6 306.4
C5' C4' C3' H3' 29.0 335.8
C3' C4' C5' O4' 116.3 115.4
C3' C4' C5' H4' 238.2 237.7
O4' C4' C5' H4' 122.0 122.3
O5' C5' C4' H5'1 125.3 240.0
O5' C5' C4' H5'2 234.7 120.0
C4' C5' O5' HO5' 180.0 180.0
H5'1 C5' C4' H5'2 109.5 240.0
H4' C4' C3' H3' 272.0 213.5
C3' C4' H4' O4' 243.3 244.7
C3' C4' H4' C5' 121.7 122.4
O4' C4' H4' C5' 238.5 237.7
H4' C4' C5' O5' 282.4 304.2
H4' C4' C5' H5'1 157.1 64.2
H4' C4' C5' H5'2 47.7 184.2
O5' C5' C4' H4' 282.4 304.2
C4' C5' O5' H5'1 234.7 120.0
C4' C5' O5' H5'2 125.3 240.0
H5'1 C5' O5' H5'2 250.5 120.0
H5'1 C5' C4' H4' 157.1 64.2
C4' C5' H5'1 O5' 125.2 240.0
C4' C5' H5'1 H5'2 242.6 120.0
O5' C5' H5'1 H5'2 117.4 240.0
H5'1 C5' O5' HO5' 305.3 60.0
H5'2 C5' C4' H4' 47.7 184.2
C4' C5' H5'2 O5' 234.8 120.0
C4' C5' H5'2 H5'1 117.4 240.0
O5' C5' H5'2 H5'1 242.6 120.0
H5'2 C5' O5' HO5' 54.7 300.0
HO5' O5' C5' H5'1 305.3 60.0
HO5' O5' C5' H5'2 54.7 300.0
N1 C11 H111 H112 128.4 120.0
N1 C11 H111 H113 244.2 239.9
H112 C11 H111 H113 115.8 119.9
N1 C11 H112 H111 234.7 240.0
N1 C11 H112 H113 125.2 120.1
H111 C11 H112 H113 250.5 240.1
N1 C11 H113 H111 115.8 120.0
N1 C11 H113 H112 231.6 239.9
H111 C11 H113 H112 115.8 119.9