PDB Chemical Component FM1

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for FM1

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N1 C2 1.413 1.322
N1 C6 1.452 1.328
C2 N3 1.366 1.313
C2 H2 1.103 1.081
N3 C4 1.387 1.339
C4 C5 1.414 1.406
C4 C9 1.380 1.411
C5 C6 1.434 1.402
C5 N7 1.391 1.368
C6 N6 1.267 1.383
N6 C66 1.436 1.465
N6 HN61 1.020 0.970
N7 N8 1.313 1.402
N7 H7 1.020 0.970
N8 C9 1.391 1.303
C9 C1' 1.540 1.505
C1' C2' 1.546 1.545
C1' O4' 1.440 1.443
C1' H1' 1.115 1.090
C2' O2' 1.408 1.429
C2' C3' 1.550 1.547
C2' H2' 1.115 1.090
O2' HO2' 0.950 0.966
C3' O3' 1.440 1.429
C3' C4' 1.493 1.543
C3' H3' 1.115 1.089
O3' HO3' 0.950 0.967
C4' O4' 1.486 1.444
C4' C5' 1.547 1.530
C4' H4' 1.116 1.090
C5' O5' 1.401 1.428
C5' H5'1 1.115 1.090
C5' H5'2 1.115 1.090
O5' HO5' 0.950 0.967
C66 H661 1.115 1.090
C66 H662 1.115 1.089
C66 H663 1.115 1.089

Bond Angles for FM1

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 N1 C6 125.2 121.2
N1 C2 N3 121.7 122.6
N1 C2 H2 120.9 118.7
N1 C6 C5 112.5 118.5
N1 C6 N6 121.2 120.7
N3 C2 H2 117.4 118.7
C2 N3 C4 113.6 120.6
N3 C4 C5 128.6 118.7
N3 C4 C9 125.7 134.3
C5 C4 C9 105.7 107.0
C4 C5 C6 118.4 118.4
C4 C5 N7 110.9 106.7
C4 C9 N8 104.9 108.7
C4 C9 C1' 137.5 125.7
C6 C5 N7 130.7 134.9
C5 C6 N6 126.3 120.7
C5 N7 N8 103.2 108.0
C5 N7 H7 130.5 126.0
C6 N6 C66 117.0 120.0
C6 N6 HN61 109.5 120.0
C66 N6 HN61 109.5 119.9
N6 C66 H661 109.5 109.5
N6 C66 H662 117.0 109.5
N6 C66 H663 109.5 109.4
N8 N7 H7 126.3 126.0
N7 N8 C9 115.3 109.6
N8 C9 C1' 117.6 125.6
C9 C1' C2' 116.6 110.4
C9 C1' O4' 106.0 110.4
C9 C1' H1' 105.8 110.3
C2' C1' O4' 105.0 104.9
C2' C1' H1' 106.7 110.3
C1' C2' O2' 107.1 110.8
C1' C2' C3' 107.1 104.0
C1' C2' H2' 113.9 110.4
O4' C1' H1' 117.2 110.4
C1' O4' C4' 111.2 105.3
O2' C2' C3' 113.3 110.5
O2' C2' H2' 107.8 110.5
C2' O2' HO2' 107.1 106.8
C3' C2' H2' 107.9 110.5
C2' C3' O3' 114.7 110.5
C2' C3' C4' 104.9 104.1
C2' C3' H3' 110.3 110.6
O3' C3' C4' 112.8 110.5
O3' C3' H3' 102.1 110.5
C3' O3' HO3' 114.7 106.8
C4' C3' H3' 112.3 110.5
C3' C4' O4' 105.8 104.8
C3' C4' C5' 110.1 110.5
C3' C4' H4' 112.5 110.4
O4' C4' C5' 112.4 110.4
O4' C4' H4' 110.3 110.4
C5' C4' H4' 106.0 110.2
C4' C5' O5' 110.2 109.5
C4' C5' H5'1 111.9 109.5
C4' C5' H5'2 111.9 109.4
O5' C5' H5'1 111.9 109.5
O5' C5' H5'2 111.9 109.5
C5' O5' HO5' 110.2 106.8
H5'1 C5' H5'2 98.5 109.5
H661 C66 H662 109.5 109.5
H661 C66 H663 100.6 109.5
H662 C66 H663 109.5 109.4

Torsion Angles for FM1

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 N1 C6 C5 0.3 0.2
C2 N1 C6 N6 179.8 180.0
N3 C2 N1 H2 180.0 180.0
N1 C2 N3 C4 0.1 360.0
C6 N1 C2 N3 359.8 0.0
C6 N1 C2 H2 179.8 180.0
C4 C5 C6 N1 359.7 359.5
N1 C6 C5 N7 179.6 180.2
C5 C6 N1 N6 180.5 180.2
N1 C6 N6 C66 359.9 359.9
N1 C6 N6 HN61 234.7 180.0
N3 C2 N1 C6 359.8 0.0
N1 C2 N3 H2 180.0 180.0
C2 N3 C4 C5 359.8 359.7
C2 N3 C4 C9 180.3 180.0
H2 C2 N1 C6 179.8 180.0
N1 C2 H2 N3 180.0 180.0
H2 C2 N3 C4 180.1 180.0
C4 N3 C2 H2 180.1 180.0
C5 C4 N3 C9 179.5 179.7
N3 C4 C5 C6 0.3 0.5
N3 C4 C5 N7 180.3 180.0
N3 C4 C9 N8 179.5 180.1
N3 C4 C9 C1' 359.4 359.7
N1 C6 C5 C4 359.7 359.5
N3 C4 C5 C9 180.4 180.2
C5 C4 C9 N8 359.8 0.3
C5 C4 C9 C1' 179.7 180.0
C6 C5 C4 N7 179.9 180.5
C4 C5 C6 N6 180.2 179.7
C4 C5 N7 N8 0.2 0.0
C4 C5 N7 H7 180.2 180.0
N3 C4 C9 C5 179.6 179.8
C9 C4 C5 C6 179.9 180.3
C9 C4 C5 N7 360.0 359.8
N7 N8 C9 C4 0.4 359.7
N8 C9 C4 C1' 180.1 180.3
C4 C9 C1' C2' 357.0 121.9
C4 C9 C1' O4' 113.4 237.4
C4 C9 C1' H1' 238.5 359.7
N1 C6 C5 N6 179.5 179.8
C6 C5 C4 C9 179.9 180.3
C4 C5 C6 N7 180.1 179.3
C6 C5 N7 N8 180.3 179.4
C6 C5 N7 H7 0.3 359.3
C5 C6 N6 C66 179.4 179.7
C5 C6 N6 HN61 54.1 359.7
N7 C5 C4 C9 360.0 359.8
C4 C5 N7 C6 179.9 180.6
N7 C5 C6 N6 0.1 0.4
N8 N7 C5 H7 180.0 180.1
C5 N7 N8 C9 359.6 0.2
N1 C6 N6 C5 180.5 180.2
N6 C6 C5 N7 0.1 0.4
C66 N6 C6 HN61 125.3 179.9
C6 N6 C66 H661 54.7 180.0
C6 N6 C66 H662 180.0 300.1
C6 N6 C66 H663 305.3 60.0
C6 N6 C66 HN61 234.7 180.1
H661 C66 N6 H662 234.7 239.9
H661 C66 N6 H663 109.4 120.0
H662 C66 N6 H663 234.7 240.1
C6 N6 HN61 C66 129.5 179.9
HN61 N6 C66 H661 180.0 360.0
HN61 N6 C66 H662 305.3 120.0
HN61 N6 C66 H663 70.5 240.0
C4 C9 N8 N7 0.4 359.7
C5 N7 N8 H7 180.0 179.9
N7 N8 C9 C1' 180.4 180.0
C5 N7 H7 N8 180.0 180.1
H7 N7 N8 C9 179.6 180.2
C4 C9 N8 C1' 179.9 179.7
C9 N8 N7 H7 179.6 180.2
N8 C9 C1' C2' 176.9 301.5
N8 C9 C1' O4' 293.3 57.0
N8 C9 C1' H1' 58.4 179.3
C4 C9 C1' N8 180.1 180.4
C2' C1' C9 O4' 243.5 244.5
C2' C1' C9 H1' 118.4 122.2
C9 C1' C2' O2' 238.4 261.5
C9 C1' C2' C3' 116.6 142.7
C9 C1' C2' H2' 357.5 24.2
O4' C1' C9 H1' 234.9 237.7
C9 C1' O4' C4' 251.5 200.6
C9 C1' C2' O4' 117.0 118.9
C9 C1' C2' H1' 242.1 237.8
O4' C1' C2' H1' 125.1 118.9
C2' C1' O4' C4' 15.5 319.6
O2' C2' C1' C3' 121.8 118.8
O2' C2' C1' H2' 240.9 237.3
C1' C2' O2' HO2' 180.0 183.8
C3' C2' C1' H2' 119.1 118.5
C1' C2' C3' O3' 110.0 118.8
C1' C2' C3' C4' 345.7 0.2
C1' C2' C3' H3' 224.5 241.5
C9 C1' O4' C2' 236.0 241.1
C9 C1' O4' H1' 117.7 122.2
C2' C1' O4' H1' 241.7 241.2
O4' C1' C2' O2' 121.4 142.6
O4' C1' C2' C3' 359.6 23.8
O4' C1' C2' H2' 240.5 265.3
C3' C4' O4' C1' 334.9 40.5
C1' O4' C4' C5' 95.0 159.5
C1' O4' C4' H4' 213.0 281.6
C9 C1' H1' C2' 124.8 122.2
C9 C1' H1' O4' 242.1 237.7
C2' C1' H1' O4' 117.3 115.5
H1' C1' C2' O2' 356.3 23.7
H1' C1' C2' C3' 234.5 264.9
H1' C1' C2' H2' 115.4 146.4
H1' C1' O4' C4' 133.8 78.4
O2' C2' C1' O4' 121.4 142.6
O2' C2' C1' H1' 356.3 23.7
C1' C2' O2' C3' 242.2 245.3
C1' C2' O2' H2' 123.0 122.6
C3' C2' O2' H2' 240.8 237.4
O2' C2' C3' O3' 352.1 359.9
O2' C2' C3' C4' 227.9 241.2
O2' C2' C3' H3' 106.7 122.5
C3' C2' C1' O4' 359.6 23.8
C3' C2' C1' H1' 234.5 264.9
C1' C2' C3' O2' 117.9 119.0
C1' C2' C3' H2' 237.0 241.6
O2' C2' C3' H2' 119.2 122.6
C3' C2' O2' HO2' 297.8 298.6
O3' C3' C2' C4' 124.2 118.6
O3' C3' C2' H3' 245.5 237.3
C2' C3' O3' HO3' 180.0 183.9
C4' C3' C2' H3' 121.2 118.7
C2' C3' C4' O4' 23.1 335.9
C2' C3' C4' C5' 261.5 217.0
C2' C3' C4' H4' 143.5 94.8
H2' C2' C1' O4' 240.5 265.3
H2' C2' C1' H1' 115.4 146.4
C1' C2' H2' O2' 241.3 237.1
C1' C2' H2' C3' 118.7 114.4
O2' C2' H2' C3' 237.4 237.3
H2' C2' O2' HO2' 57.0 61.2
H2' C2' C3' O3' 233.0 237.2
H2' C2' C3' C4' 108.7 118.6
H2' C2' C3' H3' 347.5 359.9
HO2' O2' C2' C3' 297.8 298.6
HO2' O2' C2' H2' 57.0 61.2
O3' C3' C2' H2' 233.0 237.2
C2' C3' O3' C4' 240.0 245.4
C2' C3' O3' H3' 119.3 122.7
C4' C3' O3' H3' 239.3 237.3
O3' C3' C4' O4' 257.7 217.3
O3' C3' C4' C5' 136.1 98.4
O3' C3' C4' H4' 18.1 336.2
C1' O4' C4' C3' 334.9 40.5
C4' C3' C2' H2' 108.7 118.6
C2' C3' C4' O3' 125.4 118.6
C2' C3' C4' H3' 240.1 241.3
O3' C3' C4' H3' 114.7 122.7
C4' C3' O3' HO3' 299.9 298.5
O4' C4' C3' C5' 121.6 118.9
O4' C4' C3' H4' 239.6 241.1
C5' C4' C3' H4' 118.0 122.2
C3' C4' C5' O5' 182.8 176.9
C3' C4' C5' H5'1 57.5 297.0
C3' C4' C5' H5'2 308.0 56.9
H3' C3' C2' H2' 347.5 359.9
C2' C3' H3' O3' 237.7 237.4
C2' C3' H3' C4' 116.7 114.7
O3' C3' H3' C4' 239.0 237.3
H3' C3' O3' HO3' 60.7 61.2
H3' C3' C4' O4' 143.0 94.6
H3' C3' C4' C5' 21.4 335.7
H3' C3' C4' H4' 263.4 213.5
HO3' O3' C3' C4' 299.9 298.5
HO3' O3' C3' H3' 60.7 61.2
C4' O4' C1' H1' 133.8 78.4
O4' C4' C3' H3' 143.0 94.6
C3' C4' O4' C5' 239.9 241.0
C3' C4' O4' H4' 121.9 118.9
C5' C4' O4' H4' 242.0 237.9
O4' C4' C5' O5' 65.2 61.4
O4' C4' C5' H5'1 299.9 181.5
O4' C4' C5' H5'2 190.4 301.4
C5' C4' C3' H3' 21.4 335.7
C3' C4' C5' O4' 117.6 115.5
C3' C4' C5' H4' 238.1 237.7
O4' C4' C5' H4' 120.5 122.2
O5' C5' C4' H5'1 125.3 239.9
O5' C5' C4' H5'2 234.7 120.0
C4' C5' O5' HO5' 180.0 180.1
H5'1 C5' C4' H5'2 109.5 240.0
H4' C4' C3' H3' 263.4 213.5
C3' C4' H4' O4' 242.2 244.5
C3' C4' H4' C5' 120.4 122.3
O4' C4' H4' C5' 238.2 237.8
H4' C4' C5' O5' 304.7 299.2
H4' C4' C5' H5'1 179.4 59.3
H4' C4' C5' H5'2 70.0 179.2
O5' C5' C4' H4' 304.7 299.2
C4' C5' O5' H5'1 234.7 120.0
C4' C5' O5' H5'2 125.3 240.0
H5'1 C5' O5' H5'2 250.5 120.0
H5'1 C5' C4' H4' 179.4 59.3
C4' C5' H5'1 O5' 124.3 240.0
C4' C5' H5'1 H5'2 242.2 120.0
O5' C5' H5'1 H5'2 117.8 240.0
H5'1 C5' O5' HO5' 305.3 60.0
H5'2 C5' C4' H4' 70.0 179.2
C4' C5' H5'2 O5' 235.7 120.0
C4' C5' H5'2 H5'1 117.8 240.0
O5' C5' H5'2 H5'1 242.2 120.0
H5'2 C5' O5' HO5' 54.7 300.0
HO5' O5' C5' H5'1 305.3 60.0
HO5' O5' C5' H5'2 54.7 300.0
H661 C66 N6 HN61 180.0 360.0
N6 C66 H661 H662 129.5 120.1
N6 C66 H661 H663 244.8 240.0
H662 C66 H661 H663 115.2 119.9
H662 C66 N6 HN61 305.3 120.0
N6 C66 H662 H661 234.7 239.9
N6 C66 H662 H663 125.3 119.9
H661 C66 H662 H663 250.6 240.0
H663 C66 N6 HN61 70.5 240.0
N6 C66 H663 H661 115.2 120.0
N6 C66 H663 H662 230.5 240.0
H661 C66 H663 H662 115.2 120.0