Atom Nomenclature for FLW

The atom nomenclature in PDB data files was revised with the release of data in the PDB Format Version 3.0. These changes make the PDB atom names used by PDB compliant with existing IUPAC nomenclature for standard amino acid and nucleotides (Pure & Appl. Chem., 70, 117-142, 1998) with the exception of the well established convention for C-terminal atoms OXT and HXT. A small number of additional changes were introduced in Version 3 to make atom labeling more conventional. The following chemical diagrams and tables provide the correspondences between atom names used in Version 3 and Version 2 PDB formats.

Labeled Chemical Diagrams

Chemical diagram with format V3 atom labels (heavy atoms)
Chemical diagram with format V3 atom labels (all atoms)
Chemical diagram with format V2 atom labels (heavy atoms)
Chemical diagram with format V2 atom labels (all atoms)

Atom Name Correspondences for FLW

Atom Name (V3) Atom Name (V2)
C14 C14
C15 C15
C20 C20
C21 C21
C23 C23
C29 C29
F28 F28
C13 C13
F27 F27
C16 C16
C17 C17
C12 C12
O11 O11
C9 C9
C10 C10
C5 C5
C4 C4
N1 N1
C8 C8
O26 O26
N7 N7
C6 C6
N3 N3
C2 C2
N18 N18
C19 C19
C24 C24
O25 O25
O22 O22
H14 H14
H20 H20
H20A H20A
H21 H21
H21A H21A
H23 H23
H23A H23A
H29 H29
H29A H29A
H29B H29B
H16 H16
H17 H17
H10 H10
H4 H4
HN18 HN18
H19 H19
H24 H24
H24A H24A
HO25 HO25
HO22 HO22