PDB Chemical Component FIP
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for FIP
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C3 |
C9 |
1.435 |
1.465 |
| C3 |
C2 |
1.363 |
1.343 |
| C3 |
C3P |
1.493 |
1.507 |
| C9 |
C8 |
1.408 |
1.406 |
| C9 |
C4 |
1.402 |
1.396 |
| C8 |
N1 |
1.370 |
1.378 |
| C8 |
C7 |
1.393 |
1.391 |
| C4 |
C5 |
1.386 |
1.378 |
| C4 |
H4 |
1.104 |
1.080 |
| C2 |
N1 |
1.375 |
1.368 |
| C2 |
H2 |
1.102 |
1.081 |
| N1 |
HN1 |
1.020 |
0.970 |
| C7 |
C6 |
1.366 |
1.377 |
| C7 |
H7 |
1.103 |
1.080 |
| C5 |
C6 |
1.401 |
1.389 |
| C5 |
F |
1.327 |
1.351 |
| C6 |
H6 |
1.103 |
1.080 |
| C3P |
C2P |
1.512 |
1.529 |
| C3P |
H3P1 |
1.115 |
1.089 |
| C3P |
H3P2 |
1.114 |
1.090 |
| C2P |
C1P |
1.521 |
1.530 |
| C2P |
H2P1 |
1.115 |
1.089 |
| C2P |
H2P2 |
1.115 |
1.090 |
| C1P |
OP4 |
1.411 |
1.429 |
| C1P |
H1P1 |
1.115 |
1.090 |
| C1P |
H1P2 |
1.114 |
1.089 |
| P |
OP1 |
1.485 |
1.480 |
| P |
OP2 |
1.492 |
1.610 |
| P |
OP3 |
1.498 |
1.609 |
| P |
OP4 |
1.637 |
1.610 |
| OP2 |
HO2 |
0.950 |
0.967 |
| OP3 |
HO3 |
0.950 |
0.967 |
Bond Angles for FIP
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C9 |
C3 |
C2 |
106.3 |
107.0 |
| C9 |
C3 |
C3P |
126.8 |
126.5 |
| C3 |
C9 |
C8 |
107.2 |
106.1 |
| C3 |
C9 |
C4 |
134.0 |
133.9 |
| C2 |
C3 |
C3P |
126.9 |
126.5 |
| C3 |
C2 |
N1 |
110.1 |
110.0 |
| C3 |
C2 |
H2 |
124.5 |
125.0 |
| C3 |
C3P |
C2P |
110.8 |
109.5 |
| C3 |
C3P |
H3P1 |
111.7 |
109.5 |
| C3 |
C3P |
H3P2 |
111.7 |
109.4 |
| C8 |
C9 |
C4 |
118.9 |
120.0 |
| C9 |
C8 |
N1 |
107.5 |
107.2 |
| C9 |
C8 |
C7 |
122.4 |
119.4 |
| C9 |
C4 |
C5 |
118.6 |
119.6 |
| C9 |
C4 |
H4 |
121.3 |
120.2 |
| N1 |
C8 |
C7 |
130.1 |
133.4 |
| C8 |
N1 |
C2 |
108.9 |
109.8 |
| C8 |
N1 |
HN1 |
125.4 |
125.1 |
| C8 |
C7 |
C6 |
117.5 |
119.9 |
| C8 |
C7 |
H7 |
122.2 |
120.0 |
| C5 |
C4 |
H4 |
120.2 |
120.2 |
| C4 |
C5 |
C6 |
121.0 |
120.3 |
| C4 |
C5 |
F |
119.3 |
119.8 |
| N1 |
C2 |
H2 |
125.3 |
125.0 |
| C2 |
N1 |
HN1 |
125.7 |
125.1 |
| C6 |
C7 |
H7 |
120.3 |
120.0 |
| C7 |
C6 |
C5 |
121.6 |
120.7 |
| C7 |
C6 |
H6 |
117.9 |
119.7 |
| C6 |
C5 |
F |
119.7 |
119.9 |
| C5 |
C6 |
H6 |
120.4 |
119.6 |
| C2P |
C3P |
H3P1 |
111.7 |
109.6 |
| C2P |
C3P |
H3P2 |
111.7 |
109.4 |
| C3P |
C2P |
C1P |
110.8 |
109.5 |
| C3P |
C2P |
H2P1 |
111.7 |
109.5 |
| C3P |
C2P |
H2P2 |
111.7 |
109.4 |
| H3P1 |
C3P |
H3P2 |
98.7 |
109.5 |
| C1P |
C2P |
H2P1 |
111.7 |
109.5 |
| C1P |
C2P |
H2P2 |
111.7 |
109.5 |
| C2P |
C1P |
OP4 |
109.0 |
109.5 |
| C2P |
C1P |
H1P1 |
112.4 |
109.4 |
| C2P |
C1P |
H1P2 |
112.4 |
109.5 |
| H2P1 |
C2P |
H2P2 |
98.6 |
109.5 |
| OP4 |
C1P |
H1P1 |
112.3 |
109.5 |
| OP4 |
C1P |
H1P2 |
112.3 |
109.5 |
| C1P |
OP4 |
P |
122.3 |
106.8 |
| H1P1 |
C1P |
H1P2 |
98.2 |
109.5 |
| OP1 |
P |
OP2 |
112.4 |
109.5 |
| OP1 |
P |
OP3 |
118.1 |
109.5 |
| OP1 |
P |
OP4 |
106.7 |
109.4 |
| OP2 |
P |
OP3 |
115.7 |
109.5 |
| OP2 |
P |
OP4 |
104.1 |
109.5 |
| P |
OP2 |
HO2 |
112.4 |
106.8 |
| OP3 |
P |
OP4 |
97.0 |
109.5 |
| P |
OP3 |
HO3 |
118.1 |
106.8 |
Torsion Angles for FIP
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
C3 |
C9 |
C3P |
180.8 |
179.8 |
| C9 |
C3 |
C2 |
N1 |
359.1 |
0.2 |
| C9 |
C3 |
C2 |
H2 |
179.0 |
180.2 |
| C9 |
C3 |
C3P |
C2P |
285.8 |
269.8 |
| C9 |
C3 |
C3P |
H3P1 |
51.1 |
149.7 |
| C9 |
C3 |
C3P |
H3P2 |
160.6 |
29.7 |
| C8 |
C9 |
C3 |
C4 |
180.3 |
179.2 |
| C3 |
C9 |
C8 |
N1 |
359.7 |
0.3 |
| C3 |
C9 |
C8 |
C7 |
180.0 |
180.2 |
| C3 |
C9 |
C4 |
C5 |
180.8 |
179.6 |
| C3 |
C9 |
C4 |
H4 |
0.8 |
359.3 |
| C9 |
C3 |
C2 |
C3P |
179.2 |
180.2 |
| C2 |
C3 |
C9 |
C8 |
0.7 |
359.7 |
| C2 |
C3 |
C9 |
C4 |
180.4 |
180.5 |
| C2 |
C3 |
C3P |
C2P |
104.9 |
90.1 |
| C2 |
C3 |
C3P |
H3P1 |
230.1 |
330.0 |
| C2 |
C3 |
C3P |
H3P2 |
339.6 |
210.0 |
| C8 |
N1 |
C2 |
C3 |
0.8 |
360.0 |
| N1 |
C2 |
C3 |
H2 |
180.0 |
180.0 |
| C3 |
C2 |
N1 |
HN1 |
180.8 |
180.0 |
| C9 |
C3 |
C3P |
C2 |
181.0 |
179.7 |
| C3P |
C3 |
C9 |
C8 |
179.9 |
179.9 |
| C3P |
C3 |
C9 |
C4 |
359.6 |
0.7 |
| C3P |
C3 |
C2 |
N1 |
179.9 |
180.0 |
| C3P |
C3 |
C2 |
H2 |
359.9 |
359.9 |
| C2P |
C3P |
C3 |
H3P1 |
234.8 |
120.1 |
| C2P |
C3P |
C3 |
H3P2 |
125.3 |
240.1 |
| C3 |
C3P |
C2P |
C1P |
292.5 |
180.0 |
| C3 |
C3P |
C2P |
H2P1 |
57.7 |
59.9 |
| C3 |
C3P |
C2P |
H2P2 |
167.2 |
299.9 |
| H3P1 |
C3P |
C3 |
H3P2 |
250.5 |
120.0 |
| C8 |
C9 |
C3 |
C2 |
0.7 |
359.7 |
| C8 |
C9 |
C3 |
C3P |
179.9 |
179.9 |
| C3 |
C9 |
C8 |
C4 |
179.7 |
180.7 |
| C8 |
C9 |
C4 |
C5 |
0.5 |
0.5 |
| C8 |
C9 |
C4 |
H4 |
180.5 |
180.2 |
| N1 |
C8 |
C9 |
C7 |
179.7 |
180.2 |
| C9 |
C8 |
N1 |
C2 |
359.7 |
359.8 |
| C9 |
C8 |
N1 |
HN1 |
179.7 |
179.8 |
| C9 |
C8 |
C7 |
C6 |
359.2 |
0.2 |
| C9 |
C8 |
C7 |
H7 |
179.1 |
180.2 |
| C4 |
C9 |
C3 |
C2 |
180.4 |
180.5 |
| C4 |
C9 |
C3 |
C3P |
359.6 |
0.7 |
| C3 |
C9 |
C4 |
C8 |
180.4 |
179.1 |
| C4 |
C9 |
C8 |
N1 |
180.0 |
179.7 |
| C4 |
C9 |
C8 |
C7 |
0.3 |
359.5 |
| C5 |
C4 |
C9 |
H4 |
180.0 |
180.3 |
| C9 |
C4 |
C5 |
C6 |
359.3 |
359.8 |
| C9 |
C4 |
C5 |
F |
178.8 |
179.8 |
| C3 |
C2 |
N1 |
C8 |
0.8 |
360.0 |
| N1 |
C8 |
C9 |
C4 |
180.0 |
179.7 |
| C9 |
C8 |
N1 |
C7 |
180.3 |
179.8 |
| N1 |
C8 |
C7 |
C6 |
179.5 |
180.0 |
| N1 |
C8 |
C7 |
H7 |
359.5 |
360.0 |
| C8 |
N1 |
C2 |
H2 |
180.8 |
180.0 |
| C2 |
N1 |
C8 |
HN1 |
180.0 |
180.0 |
| C7 |
C8 |
C9 |
C4 |
0.3 |
359.5 |
| C9 |
C8 |
C7 |
N1 |
179.6 |
180.2 |
| C7 |
C8 |
N1 |
C2 |
179.4 |
180.0 |
| C7 |
C8 |
N1 |
HN1 |
359.4 |
360.0 |
| C6 |
C7 |
C8 |
H7 |
180.0 |
180.1 |
| C8 |
C7 |
C6 |
C5 |
0.6 |
0.0 |
| C8 |
C7 |
C6 |
H6 |
180.6 |
180.0 |
| C9 |
C4 |
C5 |
H4 |
180.0 |
179.7 |
| C7 |
C6 |
C5 |
C4 |
0.1 |
360.0 |
| C6 |
C5 |
C4 |
F |
180.5 |
180.0 |
| C4 |
C5 |
C6 |
H6 |
180.2 |
180.0 |
| C9 |
C4 |
H4 |
C5 |
180.0 |
180.3 |
| H4 |
C4 |
C5 |
C6 |
179.3 |
180.1 |
| H4 |
C4 |
C5 |
F |
358.8 |
0.1 |
| N1 |
C2 |
C3 |
C3P |
179.9 |
180.0 |
| C3 |
C2 |
N1 |
H2 |
180.0 |
180.0 |
| C2 |
N1 |
C8 |
C7 |
179.4 |
180.0 |
| C8 |
N1 |
C2 |
HN1 |
180.0 |
180.0 |
| H2 |
C2 |
C3 |
C3P |
359.9 |
359.9 |
| C3 |
C2 |
H2 |
N1 |
180.0 |
180.0 |
| H2 |
C2 |
N1 |
HN1 |
0.8 |
0.0 |
| HN1 |
N1 |
C8 |
C7 |
359.4 |
360.0 |
| C8 |
N1 |
HN1 |
C2 |
180.0 |
180.0 |
| HN1 |
N1 |
C2 |
H2 |
0.8 |
0.0 |
| C8 |
C7 |
C6 |
H7 |
180.0 |
179.9 |
| C4 |
C5 |
C6 |
C7 |
0.1 |
360.0 |
| C7 |
C6 |
C5 |
F |
180.7 |
180.0 |
| C5 |
C6 |
C7 |
H6 |
180.0 |
180.0 |
| C8 |
C7 |
H7 |
C6 |
180.0 |
180.1 |
| H7 |
C7 |
C6 |
C5 |
180.7 |
180.1 |
| H7 |
C7 |
C6 |
H6 |
0.6 |
0.1 |
| C6 |
C5 |
C4 |
H4 |
179.3 |
180.1 |
| C4 |
C5 |
C6 |
F |
179.5 |
180.0 |
| C5 |
C6 |
C7 |
H7 |
180.7 |
180.1 |
| C7 |
C6 |
C5 |
H6 |
180.0 |
180.0 |
| F |
C5 |
C4 |
H4 |
358.8 |
0.1 |
| C4 |
C5 |
F |
C6 |
180.5 |
180.0 |
| F |
C5 |
C6 |
H6 |
0.7 |
360.0 |
| H6 |
C6 |
C7 |
H7 |
0.6 |
0.1 |
| C7 |
C6 |
H6 |
C5 |
180.0 |
180.0 |
| H6 |
C6 |
C5 |
F |
0.7 |
360.0 |
| C3 |
C3P |
C2P |
H3P1 |
125.2 |
240.0 |
| C3 |
C3P |
C2P |
H3P2 |
234.7 |
119.9 |
| H3P1 |
C3P |
C2P |
H3P2 |
109.5 |
240.0 |
| C1P |
C2P |
C3P |
H2P1 |
234.7 |
120.0 |
| C1P |
C2P |
C3P |
H2P2 |
125.3 |
240.0 |
| C3P |
C2P |
C1P |
OP4 |
177.8 |
180.0 |
| C3P |
C2P |
C1P |
H1P1 |
303.0 |
60.0 |
| C3P |
C2P |
C1P |
H1P2 |
52.6 |
300.0 |
| H2P1 |
C2P |
C3P |
H2P2 |
250.6 |
120.0 |
| C3 |
C3P |
H3P1 |
C2P |
235.3 |
120.0 |
| C3 |
C3P |
H3P1 |
H3P2 |
117.7 |
240.0 |
| C2P |
C3P |
H3P1 |
H3P2 |
242.4 |
120.0 |
| H3P1 |
C3P |
C2P |
C1P |
167.2 |
300.0 |
| H3P1 |
C3P |
C2P |
H2P1 |
292.5 |
179.9 |
| H3P1 |
C3P |
C2P |
H2P2 |
41.9 |
60.0 |
| C3 |
C3P |
H3P2 |
C2P |
124.8 |
240.0 |
| C3 |
C3P |
H3P2 |
H3P1 |
242.4 |
120.0 |
| C2P |
C3P |
H3P2 |
H3P1 |
117.6 |
239.9 |
| H3P2 |
C3P |
C2P |
C1P |
57.8 |
60.0 |
| H3P2 |
C3P |
C2P |
H2P1 |
183.0 |
300.0 |
| H3P2 |
C3P |
C2P |
H2P2 |
292.5 |
180.0 |
| C1P |
C2P |
C3P |
H3P1 |
167.2 |
300.0 |
| C1P |
C2P |
C3P |
H3P2 |
57.8 |
60.0 |
| C3P |
C2P |
C1P |
H2P1 |
125.3 |
239.9 |
| C3P |
C2P |
C1P |
H2P2 |
234.7 |
120.0 |
| H2P1 |
C2P |
C1P |
H2P2 |
109.4 |
240.0 |
| OP4 |
C1P |
C2P |
H1P1 |
234.8 |
120.0 |
| OP4 |
C1P |
C2P |
H1P2 |
125.2 |
239.9 |
| C2P |
C1P |
OP4 |
P |
173.2 |
180.1 |
| H1P1 |
C1P |
C2P |
H1P2 |
250.4 |
120.0 |
| H2P1 |
C2P |
C3P |
H3P1 |
292.5 |
179.9 |
| H2P1 |
C2P |
C3P |
H3P2 |
183.0 |
300.0 |
| C3P |
C2P |
H2P1 |
C1P |
235.2 |
120.0 |
| C3P |
C2P |
H2P1 |
H2P2 |
117.6 |
240.0 |
| C1P |
C2P |
H2P1 |
H2P2 |
242.4 |
120.0 |
| H2P1 |
C2P |
C1P |
OP4 |
52.5 |
300.0 |
| H2P1 |
C2P |
C1P |
H1P1 |
177.7 |
180.0 |
| H2P1 |
C2P |
C1P |
H1P2 |
287.3 |
60.1 |
| H2P2 |
C2P |
C3P |
H3P1 |
41.9 |
60.0 |
| H2P2 |
C2P |
C3P |
H3P2 |
292.5 |
180.0 |
| C3P |
C2P |
H2P2 |
C1P |
124.8 |
240.0 |
| C3P |
C2P |
H2P2 |
H2P1 |
242.4 |
120.0 |
| C1P |
C2P |
H2P2 |
H2P1 |
117.6 |
240.0 |
| H2P2 |
C2P |
C1P |
OP4 |
303.1 |
60.0 |
| H2P2 |
C2P |
C1P |
H1P1 |
68.3 |
300.0 |
| H2P2 |
C2P |
C1P |
H1P2 |
177.9 |
180.1 |
| OP4 |
C1P |
C2P |
H2P1 |
52.5 |
300.0 |
| OP4 |
C1P |
C2P |
H2P2 |
303.1 |
60.0 |
| C2P |
C1P |
OP4 |
H1P1 |
125.2 |
240.0 |
| C2P |
C1P |
OP4 |
H1P2 |
234.8 |
120.0 |
| H1P1 |
C1P |
OP4 |
H1P2 |
109.5 |
240.0 |
| OP1 |
P |
OP4 |
C1P |
23.0 |
300.0 |
| OP2 |
P |
OP4 |
C1P |
263.9 |
180.0 |
| OP3 |
P |
OP4 |
C1P |
145.2 |
60.0 |
| H1P1 |
C1P |
C2P |
H2P1 |
177.7 |
180.0 |
| H1P1 |
C1P |
C2P |
H2P2 |
68.3 |
300.0 |
| C2P |
C1P |
H1P1 |
OP4 |
236.6 |
120.0 |
| C2P |
C1P |
H1P1 |
H1P2 |
118.3 |
240.0 |
| OP4 |
C1P |
H1P1 |
H1P2 |
241.7 |
120.0 |
| H1P1 |
C1P |
OP4 |
P |
47.9 |
300.0 |
| H1P2 |
C1P |
C2P |
H2P1 |
287.3 |
60.1 |
| H1P2 |
C1P |
C2P |
H2P2 |
177.9 |
180.1 |
| C2P |
C1P |
H1P2 |
OP4 |
123.4 |
240.0 |
| C2P |
C1P |
H1P2 |
H1P1 |
241.7 |
119.9 |
| OP4 |
C1P |
H1P2 |
H1P1 |
118.3 |
240.0 |
| H1P2 |
C1P |
OP4 |
P |
298.4 |
60.0 |
| C1P |
OP4 |
P |
OP1 |
23.0 |
300.0 |
| OP2 |
P |
OP1 |
OP3 |
221.2 |
240.0 |
| OP2 |
P |
OP1 |
OP4 |
113.5 |
120.0 |
| OP1 |
P |
OP2 |
HO2 |
180.0 |
60.0 |
| OP3 |
P |
OP1 |
OP4 |
252.3 |
240.0 |
| OP1 |
P |
OP3 |
HO3 |
180.0 |
180.0 |
| C1P |
OP4 |
P |
OP2 |
263.9 |
180.0 |
| OP1 |
P |
OP2 |
OP3 |
139.8 |
120.0 |
| OP1 |
P |
OP2 |
OP4 |
244.9 |
240.1 |
| OP3 |
P |
OP2 |
OP4 |
105.1 |
120.0 |
| OP2 |
P |
OP3 |
HO3 |
317.5 |
300.0 |
| C1P |
OP4 |
P |
OP3 |
145.2 |
60.0 |
| OP1 |
P |
OP3 |
OP2 |
222.5 |
240.0 |
| OP1 |
P |
OP3 |
OP4 |
113.2 |
120.0 |
| OP2 |
P |
OP3 |
OP4 |
250.6 |
240.0 |
| OP3 |
P |
OP2 |
HO2 |
40.2 |
300.0 |
| P |
OP4 |
C1P |
H1P1 |
47.9 |
300.0 |
| P |
OP4 |
C1P |
H1P2 |
298.4 |
60.0 |
| OP1 |
P |
OP4 |
OP2 |
119.1 |
120.0 |
| OP1 |
P |
OP4 |
OP3 |
237.8 |
240.0 |
| OP2 |
P |
OP4 |
OP3 |
118.8 |
120.0 |
| OP4 |
P |
OP2 |
HO2 |
295.1 |
180.0 |
| OP4 |
P |
OP3 |
HO3 |
66.8 |
60.0 |
| HO2 |
OP2 |
P |
OP3 |
40.2 |
300.0 |
| HO2 |
OP2 |
P |
OP4 |
295.1 |
180.0 |
| HO3 |
OP3 |
P |
OP4 |
66.8 |
60.0 |