PDB Chemical Component FDP

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for FDP

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
P1	O1P	1.501	1.481
P1	O2P	1.499	1.610
P1	O3P	1.496	1.609
P1	O2	1.570	1.610
O2P	HOP2	0.949	0.967
O3P	HOP3	0.949	0.966
O1	C1	1.488	1.428
O1	HO1	0.950	0.967
C1	C2	1.572	1.530
C1	H11	1.115	1.090
C1	H12	1.114	1.089
C2	O2	1.433	1.428
C2	C3	1.536	1.544
C2	O5	1.431	1.432
C3	O3	1.406	1.429
C3	C4	1.537	1.553
C3	H3	1.114	1.089
O3	HO3	0.988	0.966
C4	O4	1.420	1.429
C4	C5	1.522	1.549
C4	H4	1.116	1.090
O4	HO4	0.972	0.967
C5	O5	1.467	1.436
C5	C6	1.523	1.530
C5	H5	1.114	1.090
C6	O6	1.479	1.428
C6	H61	1.115	1.089
C6	H62	1.115	1.090
O6	P2	1.599	1.610
P2	O4P	1.491	1.480
P2	O5P	1.502	1.610
P2	O6P	1.491	1.610
O5P	HOP5	0.950	0.967
O6P	HOP6	0.950	0.966

Bond Angles for FDP

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O1P	P1	O2P	106.4	109.5
O1P	P1	O3P	110.1	109.5
O1P	P1	O2	107.5	109.4
O2P	P1	O3P	107.6	109.5
O2P	P1	O2	109.7	109.5
P1	O2P	HOP2	106.5	106.8
O3P	P1	O2	115.2	109.5
P1	O3P	HOP3	110.1	106.8
P1	O2	C2	124.6	106.8
C1	O1	HO1	125.7	106.9
O1	C1	C2	125.6	109.5
O1	C1	H11	106.5	109.4
O1	C1	H12	106.5	109.5
C2	C1	H11	106.5	109.5
C2	C1	H12	106.5	109.5
C1	C2	O2	114.4	109.8
C1	C2	C3	113.8	109.8
C1	C2	O5	114.3	109.9
H11	C1	H12	103.1	109.5
O2	C2	C3	106.4	109.9
O2	C2	O5	108.1	109.8
C3	C2	O5	98.5	107.6
C2	C3	O3	112.4	111.0
C2	C3	C4	105.9	102.2
C2	C3	H3	110.6	110.9
C2	O5	C5	114.1	110.0
O3	C3	C4	111.4	110.9
O3	C3	H3	105.0	110.7
C3	O3	HO3	97.9	106.8
C4	C3	H3	111.7	110.9
C3	C4	O4	113.6	111.1
C3	C4	C5	103.4	100.9
C3	C4	H4	113.8	111.1
O4	C4	C5	116.9	111.2
O4	C4	H4	99.3	111.0
C4	O4	HO4	103.3	106.7
C5	C4	H4	110.3	111.1
C4	C5	O5	104.0	105.2
C4	C5	C6	106.8	110.4
C4	C5	H5	116.9	110.2
O5	C5	C6	115.6	110.3
O5	C5	H5	108.3	110.4
C6	C5	H5	105.6	110.2
C5	C6	O6	111.5	109.5
C5	C6	H61	111.5	109.5
C5	C6	H62	111.5	109.4
O6	C6	H61	111.5	109.5
O6	C6	H62	111.5	109.4
C6	O6	P2	123.4	106.8
H61	C6	H62	98.9	109.5
O6	P2	O4P	110.6	109.5
O6	P2	O5P	112.5	109.5
O6	P2	O6P	105.1	109.5
O4P	P2	O5P	110.0	109.5
O4P	P2	O6P	110.1	109.5
O5P	P2	O6P	108.4	109.4
P2	O5P	HOP5	112.6	106.8
P2	O6P	HOP6	105.1	106.9

Torsion Angles for FDP

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O2P	P1	O1P	O3P	116.4	120.0
O2P	P1	O1P	O2	242.6	240.0
O1P	P1	O2P	HOP2	180.0	300.0
O3P	P1	O1P	O2	126.2	120.0
O1P	P1	O3P	HOP3	180.0	180.0
O1P	P1	O2	C2	162.5	66.7
O1P	P1	O2P	O3P	241.9	240.0
O1P	P1	O2P	O2	116.0	120.0
O3P	P1	O2P	O2	234.1	239.9
O2P	P1	O3P	HOP3	64.3	60.0
O2P	P1	O2	C2	277.8	186.7
O1P	P1	O3P	O2P	115.6	120.0
O1P	P1	O3P	O2	238.2	240.0
O2P	P1	O3P	O2	122.6	120.0
O3P	P1	O2P	HOP2	298.1	60.0
O3P	P1	O2	C2	39.3	306.7
O1P	P1	O2	O2P	244.7	240.0
O1P	P1	O2	O3P	123.2	120.0
O2P	P1	O2	O3P	238.5	240.0
O2	P1	O2P	HOP2	64.0	180.1
O2	P1	O3P	HOP3	301.7	300.0
C1	C2	O2	P1	45.6	118.5
P1	O2	C2	C3	172.1	239.3
P1	O2	C2	O5	277.1	357.5
HOP2	O2P	P1	O3P	298.1	60.0
HOP2	O2P	P1	O2	64.0	180.1
HOP3	O3P	P1	O2	301.7	300.0
C2	C1	O1	H11	234.8	240.1
C2	C1	O1	H12	125.2	120.1
O1	C1	C2	O2	14.1	302.2
O1	C1	C2	C3	251.6	181.3
O1	C1	C2	O5	139.5	63.2
H11	C1	O1	H12	250.5	240.0
HO1	O1	C1	C2	180.0	175.0
HO1	O1	C1	H11	305.2	295.0
HO1	O1	C1	H12	54.8	55.0
P1	O2	C2	C1	45.6	118.5
C2	C1	O1	HO1	180.0	175.0
O1	C1	C2	H11	125.2	119.9
O1	C1	C2	H12	234.8	240.0
H11	C1	C2	H12	109.6	120.1
O2	C2	C1	C3	122.6	120.9
O2	C2	C1	O5	234.7	239.1
C3	C2	C1	O5	112.1	118.1
C1	C2	C3	O3	79.9	100.8
C1	C2	C3	C4	201.7	219.1
C1	C2	C3	H3	322.9	337.3
C1	C2	O5	C5	153.4	117.8
H11	C1	O1	HO1	305.2	295.0
O1	C1	H11	C2	223.8	240.1
O1	C1	H11	H12	111.9	120.0
C2	C1	H11	H12	248.1	239.9
H11	C1	C2	O2	248.9	182.4
H11	C1	C2	C3	126.3	61.4
H11	C1	C2	O5	14.2	303.3
H12	C1	O1	HO1	54.8	55.0
O1	C1	H12	C2	136.2	120.0
O1	C1	H12	H11	248.1	240.1
C2	C1	H12	H11	111.9	120.1
H12	C1	C2	O2	139.4	62.3
H12	C1	C2	C3	16.8	301.3
H12	C1	C2	O5	264.7	183.2
O2	C2	C1	H11	248.9	182.4
O2	C2	C1	H12	139.4	62.3
C1	C2	O2	C3	233.5	239.1
C1	C2	O2	O5	128.5	121.0
C3	C2	O2	O5	255.0	241.8
O2	C2	C3	O3	313.0	339.9
O2	C2	C3	C4	74.9	98.2
O2	C2	C3	H3	196.0	216.4
O2	C2	O5	C5	282.0	238.7
C3	C2	C1	H11	126.3	61.4
C3	C2	C1	H12	16.8	301.3
C1	C2	C3	O2	126.9	120.9
C1	C2	C3	O5	238.7	240.4
O2	C2	C3	O5	111.8	119.6
C3	C2	O5	C5	32.4	358.3
O3	C3	C2	C4	238.1	241.7
O3	C3	C2	H3	117.0	123.5
C2	C3	O3	HO3	48.1	174.4
C4	C3	C2	H3	238.9	241.8
C2	C3	C4	O4	157.4	152.1
C2	C3	C4	C5	29.7	34.1
C2	C3	C4	H4	270.0	276.2
O5	C2	C1	H11	14.2	303.3
O5	C2	C1	H12	264.7	183.2
C1	C2	O5	O2	231.4	239.1
C1	C2	O5	C3	121.0	119.5
O2	C2	O5	C3	249.6	240.4
O5	C2	C3	O3	201.2	220.4
O5	C2	C3	C4	323.1	338.7
O5	C2	C3	H3	84.2	96.9
C4	C5	O5	C2	345.0	24.5
C2	O5	C5	C6	101.8	143.5
C2	O5	C5	H5	220.0	265.6
O3	C3	C2	O5	201.2	220.4
C2	C3	O3	C4	118.7	112.9
C2	C3	O3	H3	239.7	236.4
C4	C3	O3	H3	121.0	123.5
O3	C3	C4	O4	279.9	270.5
O3	C3	C4	C5	152.2	152.5
O3	C3	C4	H4	32.5	34.6
C4	C3	C2	O5	323.1	338.7
C2	C3	C4	O3	237.5	241.6
C2	C3	C4	H3	120.4	118.2
O3	C3	C4	H3	242.9	236.6
C4	C3	O3	HO3	289.4	61.5
O4	C4	C3	C5	127.7	118.0
O4	C4	C3	H4	247.3	235.9
C3	C4	O4	HO4	184.2	186.9
C5	C4	C3	H4	119.6	117.9
C3	C4	C5	O5	350.0	323.5
C3	C4	C5	C6	227.3	204.6
C3	C4	C5	H5	109.3	82.5
H3	C3	C2	O5	84.2	96.9
C2	C3	H3	O3	121.5	123.7
C2	C3	H3	C4	242.3	247.2
O3	C3	H3	C4	120.9	123.5
H3	C3	O3	HO3	168.4	298.0
H3	C3	C4	O4	36.9	33.9
H3	C3	C4	C5	269.2	275.9
H3	C3	C4	H4	149.6	158.0
HO3	O3	C3	C4	289.4	61.5
HO3	O3	C3	H3	168.4	298.0
O4	C4	C3	H3	36.9	33.9
C3	C4	O4	C5	239.7	248.4
C3	C4	O4	H4	121.1	124.2
C5	C4	O4	H4	241.5	235.8
O4	C4	C5	O5	224.4	205.6
O4	C4	C5	C6	101.7	86.6
O4	C4	C5	H5	343.7	324.6
C2	O5	C5	C4	345.0	24.5
C5	C4	C3	H3	269.2	275.9
C3	C4	C5	O4	125.6	118.0
C3	C4	C5	H4	238.0	242.1
O4	C4	C5	H4	112.4	124.2
C5	C4	O4	HO4	304.6	298.5
O5	C5	C4	C6	122.7	119.0
O5	C5	C4	H5	240.7	241.0
C6	C5	C4	H5	117.9	122.0
C4	C5	C6	O6	186.1	180.9
C4	C5	C6	H61	311.4	300.9
C4	C5	C6	H62	60.8	61.0
H4	C4	C3	H3	149.6	158.0
C3	C4	H4	O4	239.0	235.8
C3	C4	H4	C5	115.7	111.5
O4	C4	H4	C5	236.7	235.7
H4	C4	O4	HO4	63.1	62.8
H4	C4	C5	O5	112.0	81.4
H4	C4	C5	C6	349.2	322.4
H4	C4	C5	H5	231.3	200.4
HO4	O4	C4	C5	304.6	298.5
HO4	O4	C4	H4	63.1	62.8
O5	C5	C4	H4	112.0	81.4
C4	C5	O5	C6	243.2	241.0
C4	C5	O5	H5	125.0	118.9
C6	C5	O5	H5	241.8	237.9
O5	C5	C6	O6	70.9	65.1
O5	C5	C6	H61	196.2	185.1
O5	C5	C6	H62	305.7	305.1
C6	C5	C4	H4	349.2	322.4
C4	C5	C6	O5	115.2	115.8
C4	C5	C6	H5	234.9	238.0
O5	C5	C6	H5	119.7	122.2
O6	C6	C5	H61	234.7	239.9
O6	C6	C5	H62	125.2	119.9
C5	C6	O6	P2	153.6	180.0
H61	C6	C5	H62	250.6	240.0
H5	C5	C4	H4	231.3	200.4
C4	C5	H5	O5	243.0	244.2
C4	C5	H5	C6	118.6	122.1
O5	C5	H5	C6	235.6	237.9
H5	C5	C6	O6	311.2	302.9
H5	C5	C6	H61	76.5	63.0
H5	C5	C6	H62	185.9	183.0
O6	C6	C5	H5	311.2	302.9
C5	C6	O6	H61	125.3	120.0
C5	C6	O6	H62	234.8	240.1
H61	C6	O6	H62	109.5	120.1
C6	O6	P2	O4P	310.2	60.0
C6	O6	P2	O5P	73.6	180.0
C6	O6	P2	O6P	191.4	300.0
H61	C6	C5	H5	76.5	63.0
C5	C6	H61	O6	234.7	240.0
C5	C6	H61	H62	117.4	120.0
O6	C6	H61	H62	242.6	240.0
H61	C6	O6	P2	28.3	60.0
H62	C6	C5	H5	185.9	183.0
C5	C6	H62	O6	125.2	119.9
C5	C6	H62	H61	242.7	240.0
O6	C6	H62	H61	117.4	120.1
H62	C6	O6	P2	278.9	299.9
P2	O6	C6	H61	28.3	60.0
P2	O6	C6	H62	278.9	299.9
O4P	P2	O6	O5P	236.6	240.0
O4P	P2	O6	O6P	118.8	120.0
O5P	P2	O6	O6P	242.2	240.0
O6	P2	O5P	HOP5	180.0	180.1
O6	P2	O6P	HOP6	180.0	300.0
O6	P2	O4P	O5P	124.9	120.0
O6	P2	O4P	O6P	244.3	240.0
O5P	P2	O4P	O6P	119.4	119.9
O4P	P2	O5P	HOP5	303.8	300.1
O4P	P2	O6P	HOP6	60.9	180.0
O6	P2	O5P	O4P	236.2	240.0
O6	P2	O5P	O6P	115.8	120.0
O4P	P2	O5P	O6P	239.6	240.0
O5P	P2	O6P	HOP6	300.6	60.0
O6	P2	O6P	O4P	119.1	120.0
O6	P2	O6P	O5P	239.5	240.0
O4P	P2	O6P	O5P	120.3	120.0
O6P	P2	O5P	HOP5	64.2	60.0
HOP5	O5P	P2	O6P	64.2	60.0