PDB Chemical Component FDM

Ideal Model

Chemical Description

Name 3'-FLUORO-3'-DEOXYTHYMIDINE MONOPHOSPHATE
Synonyms PHOSPHORIC ACID MONO-[3-FLUORO-5-(5-METHYL-2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN-1-YL)-TETRAHYRO-FURAN-2-YLMETHYL] ESTER
Formula C10 H14 F N2 O7 P
Formal charge 0
Molecular weight 324.200 g/mol
Component type NON-POLYMER

Chemical features

Atom count 35
Chiral atom count 3
Chiral atoms C1' C3' C4'
Bond count 36
Aromatic bond count 6

Chemical Identifiers

Systematic name (ACDLabs) 3'-deoxy-3'-fluorothymidine 5'-(dihydrogen phosphate)
Systematic name (OpenEye OEToolkits) [(2R,3S,5R)-3-fluoro-5-(5-methyl-2,4-dioxo-pyrimidin-1-yl)oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) CC1=CN([C@H]2C[C@H](F)[C@@H](CO[P](O)(O)=O)O2)C(=O)NC1=O
SMILES (CACTVS) CC1=CN([CH]2C[CH](F)[CH](CO[P](O)(O)=O)O2)C(=O)NC1=O
Stereo SMILES (OpenEye) CC1=CN(C(=O)NC1=O)[C@H]2C[C@@H]([C@H](O2)COP(=O)(O)O)F
InChI descriptor InChI=1S/C10H14FN2O7P/c1-5-3-13(10(15)12-9(5)14)8-2-6(11)7(20-8)4-19-21(16,17)18/h3,6-8H,2,4H2,1H3,(H,12,14,15)(H2,16,17,18)/t6-,7+,8+/m0/s1
InChIKey descriptor GGCAVPJXJISBOA-XLPZGREQSA-N

Status Information

Last modified 2011-06-04
Created 2003-01-14
Release status REL
Model PDB code 1NMX
Processing site RCSB