PDB Chemical Component FDL
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for FDL
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N |
CA |
1.445 |
1.468 |
CA |
CB |
1.575 |
1.530 |
CA |
C |
1.531 |
1.507 |
CB |
CAS |
1.550 |
1.530 |
CAS |
CAT |
1.510 |
1.530 |
C |
NAM |
1.355 |
1.348 |
C |
O |
1.236 |
1.213 |
CAT |
CAU |
1.505 |
1.530 |
NAM |
CAJ |
1.358 |
1.396 |
CAU |
NAV |
1.505 |
1.464 |
NAV |
CAW |
1.352 |
1.347 |
CAJ |
CAG |
1.373 |
1.387 |
CAJ |
CAI |
1.379 |
1.395 |
CAW |
CAX |
1.534 |
1.507 |
CAW |
OAY |
1.232 |
1.213 |
CAG |
CAF |
1.399 |
1.386 |
CAI |
CAH |
1.401 |
1.365 |
CAF |
OAA |
1.373 |
1.350 |
CAF |
CAE |
1.417 |
1.408 |
CAH |
CAE |
1.369 |
1.399 |
OAA |
CAB |
1.409 |
1.341 |
CAE |
CAD |
1.418 |
1.464 |
CAB |
OAK |
1.247 |
1.218 |
CAB |
CAC |
1.427 |
1.410 |
CAD |
CAC |
1.391 |
1.359 |
CAD |
CAL |
1.411 |
1.507 |
CAL |
H1 |
1.100 |
1.090 |
CAL |
H2 |
1.100 |
1.091 |
CAL |
H3 |
1.100 |
1.090 |
CAC |
H4 |
1.080 |
1.079 |
CAG |
H5 |
1.080 |
1.081 |
CAH |
H6 |
1.080 |
1.080 |
CAI |
H7 |
1.080 |
1.079 |
NAM |
H8 |
1.000 |
0.969 |
CA |
H9 |
1.100 |
1.090 |
N |
H10 |
1.000 |
1.009 |
N |
H11 |
1.000 |
1.009 |
CB |
H13 |
1.100 |
1.090 |
CB |
H14 |
1.100 |
1.090 |
CAS |
H15 |
1.100 |
1.090 |
CAS |
H16 |
1.100 |
1.090 |
CAT |
H17 |
1.100 |
1.091 |
CAT |
H18 |
1.100 |
1.090 |
CAU |
H19 |
1.100 |
1.091 |
CAU |
H20 |
1.100 |
1.090 |
NAV |
H21 |
1.000 |
0.970 |
CAX |
H22 |
1.100 |
1.091 |
CAX |
H23 |
1.100 |
1.091 |
CAX |
H24 |
1.100 |
1.090 |
Bond Angles for FDL
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
N |
CA |
CB |
111.2 |
109.5 |
N |
CA |
H9 |
109.0 |
109.5 |
CA |
CB |
CAS |
108.2 |
109.5 |
CB |
CA |
H9 |
107.4 |
109.5 |
CA |
CB |
H13 |
109.8 |
109.5 |
CA |
CB |
H14 |
109.8 |
109.5 |
CB |
CAS |
CAT |
105.8 |
109.5 |
CAS |
CB |
H13 |
109.8 |
109.5 |
CAS |
CB |
H14 |
109.8 |
109.5 |
CB |
CAS |
H15 |
110.4 |
109.4 |
CB |
CAS |
H16 |
110.4 |
109.5 |
CAS |
CAT |
CAU |
110.1 |
109.5 |
CAT |
CAS |
H15 |
110.4 |
109.5 |
CAT |
CAS |
H16 |
110.4 |
109.5 |
CAS |
CAT |
H17 |
109.3 |
109.5 |
CAS |
CAT |
H18 |
109.3 |
109.5 |
C |
NAM |
H8 |
120.6 |
120.0 |
CAT |
CAU |
NAV |
110.1 |
109.5 |
CAU |
CAT |
H17 |
109.3 |
109.5 |
CAU |
CAT |
H18 |
109.3 |
109.5 |
CAT |
CAU |
H19 |
109.3 |
109.4 |
CAT |
CAU |
H20 |
109.3 |
109.5 |
CAU |
NAV |
CAW |
119.5 |
120.0 |
NAV |
CAU |
H19 |
109.3 |
109.5 |
NAV |
CAU |
H20 |
109.3 |
109.5 |
CAU |
NAV |
H21 |
120.3 |
120.0 |
NAV |
CAW |
CAX |
117.7 |
120.0 |
NAV |
CAW |
OAY |
123.2 |
120.0 |
CAW |
NAV |
H21 |
120.3 |
120.0 |
CAJ |
CAG |
H5 |
121.1 |
120.1 |
CAJ |
CAI |
H7 |
115.9 |
119.8 |
OAY |
CAW |
CAX |
119.0 |
120.0 |
CAW |
CAX |
H22 |
109.5 |
109.5 |
CAW |
CAX |
H23 |
109.5 |
109.5 |
CAW |
CAX |
H24 |
109.5 |
109.5 |
CAG |
CAF |
CAE |
125.1 |
119.4 |
CAI |
CAH |
H6 |
122.1 |
120.1 |
CAB |
CAC |
H4 |
120.4 |
120.1 |
CAD |
CAC |
H4 |
120.4 |
120.1 |
CAD |
CAL |
H1 |
109.5 |
109.5 |
CAD |
CAL |
H2 |
109.4 |
109.4 |
CAD |
CAL |
H3 |
109.5 |
109.5 |
H1 |
CAL |
H2 |
109.5 |
109.5 |
H1 |
CAL |
H3 |
109.5 |
109.5 |
H2 |
CAL |
H3 |
109.5 |
109.4 |
H10 |
N |
H11 |
109.5 |
111.0 |
H13 |
CB |
H14 |
109.5 |
109.4 |
H15 |
CAS |
H16 |
109.5 |
109.5 |
H17 |
CAT |
H18 |
109.5 |
109.4 |
H19 |
CAU |
H20 |
109.5 |
109.5 |
H22 |
CAX |
H23 |
109.4 |
109.4 |
H22 |
CAX |
H24 |
109.4 |
109.5 |
H23 |
CAX |
H24 |
109.5 |
109.4 |
Torsion Angles for FDL
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
N |
CA |
CB |
CAS |
188.1 |
295.0 |
CB |
CA |
N |
H9 |
118.2 |
120.0 |
N |
CA |
CB |
H13 |
307.9 |
55.0 |
N |
CA |
CB |
H14 |
68.3 |
175.0 |
N |
CA |
CB |
H9 |
240.8 |
240.0 |
CA |
CB |
CAS |
CAT |
173.7 |
180.0 |
CAS |
CB |
CA |
H13 |
240.2 |
240.0 |
CAS |
CB |
CA |
H14 |
119.8 |
120.0 |
CA |
CB |
CAS |
H15 |
293.1 |
300.0 |
CA |
CB |
CAS |
H16 |
54.3 |
60.0 |
H13 |
CB |
CA |
H14 |
239.6 |
240.0 |
CA |
C |
NAM |
H8 |
356.9 |
5.2 |
CAS |
CB |
CA |
H9 |
307.4 |
55.0 |
CA |
CB |
CAS |
H13 |
119.8 |
120.0 |
CA |
CB |
CAS |
H14 |
240.2 |
240.0 |
CB |
CAS |
CAT |
CAU |
164.4 |
180.0 |
CAT |
CAS |
CB |
H15 |
240.6 |
240.0 |
CAT |
CAS |
CB |
H16 |
119.4 |
120.0 |
CB |
CAS |
CAT |
H17 |
284.5 |
300.0 |
CB |
CAS |
CAT |
H18 |
44.4 |
60.0 |
H13 |
CB |
CAS |
H14 |
120.4 |
120.0 |
H15 |
CAS |
CB |
H16 |
238.8 |
240.0 |
CAT |
CAS |
CB |
H13 |
53.9 |
60.0 |
CAT |
CAS |
CB |
H14 |
293.6 |
300.0 |
CB |
CAS |
CAT |
H15 |
119.4 |
120.0 |
CB |
CAS |
CAT |
H16 |
240.6 |
240.0 |
CAS |
CAT |
CAU |
NAV |
178.6 |
180.0 |
CAU |
CAT |
CAS |
H17 |
239.9 |
240.0 |
CAU |
CAT |
CAS |
H18 |
120.1 |
120.0 |
CAS |
CAT |
CAU |
H19 |
298.6 |
300.0 |
CAS |
CAT |
CAU |
H20 |
58.5 |
59.9 |
H15 |
CAS |
CAT |
H16 |
121.2 |
120.0 |
H17 |
CAT |
CAS |
H18 |
240.2 |
240.0 |
O |
C |
NAM |
H8 |
178.9 |
185.2 |
CAU |
CAT |
CAS |
H15 |
45.0 |
60.1 |
CAU |
CAT |
CAS |
H16 |
283.8 |
300.0 |
CAS |
CAT |
CAU |
H17 |
120.1 |
120.0 |
CAS |
CAT |
CAU |
H18 |
239.9 |
240.0 |
CAT |
CAU |
NAV |
CAW |
218.3 |
180.0 |
NAV |
CAU |
CAT |
H19 |
239.9 |
240.0 |
NAV |
CAU |
CAT |
H20 |
120.1 |
120.1 |
CAT |
CAU |
NAV |
H21 |
38.3 |
360.0 |
H17 |
CAT |
CAU |
H18 |
119.8 |
120.0 |
H19 |
CAU |
CAT |
H20 |
240.1 |
240.0 |
NAM |
CAJ |
CAG |
H5 |
359.0 |
0.0 |
NAM |
CAJ |
CAI |
H7 |
0.8 |
360.0 |
NAV |
CAU |
CAT |
H17 |
58.5 |
60.0 |
NAV |
CAU |
CAT |
H18 |
298.6 |
300.0 |
CAT |
CAU |
NAV |
H19 |
120.1 |
119.9 |
CAT |
CAU |
NAV |
H20 |
239.9 |
239.9 |
CAU |
NAV |
CAW |
CAX |
177.1 |
180.0 |
CAU |
NAV |
CAW |
OAY |
358.0 |
359.9 |
CAW |
NAV |
CAU |
H21 |
180.0 |
180.0 |
H19 |
CAU |
NAV |
H20 |
119.9 |
120.0 |
CAW |
NAV |
CAU |
H19 |
98.2 |
60.1 |
CAW |
NAV |
CAU |
H20 |
338.3 |
300.1 |
CAU |
NAV |
CAW |
H21 |
180.0 |
180.0 |
OAY |
CAW |
NAV |
CAX |
180.9 |
179.9 |
NAV |
CAW |
CAX |
H22 |
180.8 |
90.0 |
NAV |
CAW |
CAX |
H23 |
300.8 |
210.0 |
NAV |
CAW |
CAX |
H24 |
60.9 |
329.9 |
CAI |
CAJ |
CAG |
H5 |
179.9 |
180.0 |
CAJ |
CAI |
CAH |
H6 |
180.6 |
180.3 |
NAV |
CAW |
CAX |
OAY |
180.9 |
179.9 |
CAX |
CAW |
NAV |
H21 |
357.2 |
0.0 |
H22 |
CAX |
CAW |
H23 |
240.0 |
240.0 |
H22 |
CAX |
CAW |
H24 |
120.0 |
120.0 |
H23 |
CAX |
CAW |
H24 |
239.9 |
240.0 |
NAV |
CAW |
OAY |
CAX |
179.1 |
180.1 |
OAY |
CAW |
NAV |
H21 |
178.1 |
180.0 |
OAY |
CAW |
CAX |
H22 |
360.0 |
270.0 |
OAY |
CAW |
CAX |
H23 |
120.0 |
30.0 |
OAY |
CAW |
CAX |
H24 |
240.0 |
150.0 |
OAA |
CAB |
CAC |
H4 |
180.8 |
180.0 |
CAE |
CAD |
CAC |
H4 |
179.0 |
180.2 |
CAE |
CAD |
CAL |
H1 |
180.0 |
179.7 |
CAE |
CAD |
CAL |
H2 |
300.0 |
299.7 |
CAE |
CAD |
CAL |
H3 |
60.0 |
59.7 |
OAK |
CAB |
CAC |
H4 |
359.9 |
0.0 |
CAD |
CAC |
CAB |
H4 |
180.0 |
179.9 |
CAB |
CAC |
CAD |
H4 |
180.0 |
180.1 |
CAC |
CAD |
CAL |
H1 |
0.5 |
0.1 |
CAC |
CAD |
CAL |
H2 |
120.5 |
120.1 |
CAC |
CAD |
CAL |
H3 |
240.5 |
240.0 |
H1 |
CAL |
CAD |
H2 |
240.0 |
240.0 |
H1 |
CAL |
CAD |
H3 |
120.0 |
120.1 |
H2 |
CAL |
CAD |
H3 |
240.0 |
240.1 |
CAD |
CAL |
H1 |
H2 |
120.0 |
119.9 |
CAD |
CAL |
H1 |
H3 |
240.0 |
239.9 |
H2 |
CAL |
H1 |
H3 |
120.0 |
120.0 |
CAD |
CAL |
H2 |
H1 |
240.0 |
240.0 |
CAD |
CAL |
H2 |
H3 |
120.0 |
120.0 |
H1 |
CAL |
H2 |
H3 |
240.0 |
240.0 |
CAD |
CAL |
H3 |
H1 |
120.0 |
120.1 |
CAD |
CAL |
H3 |
H2 |
240.0 |
240.1 |
H1 |
CAL |
H3 |
H2 |
120.0 |
120.0 |
H5 |
CAG |
CAF |
CAE |
179.8 |
180.2 |
H7 |
CAI |
CAH |
H6 |
0.5 |
0.1 |
N |
CA |
H9 |
CB |
120.6 |
120.0 |
H9 |
CA |
CB |
CAS |
307.4 |
55.0 |
H9 |
CA |
CB |
H13 |
67.1 |
175.1 |
H9 |
CA |
CB |
H14 |
187.5 |
295.0 |
H10 |
N |
CA |
CB |
180.0 |
176.0 |
H10 |
N |
CA |
H9 |
61.7 |
56.0 |
H11 |
N |
CA |
CB |
300.0 |
300.1 |
H11 |
N |
CA |
H9 |
181.8 |
180.0 |
CA |
CB |
H13 |
CAS |
241.2 |
240.0 |
H13 |
CB |
CA |
H9 |
67.1 |
175.1 |
CA |
CB |
H13 |
H14 |
120.6 |
120.0 |
H13 |
CB |
CAS |
CAT |
53.9 |
60.0 |
CAS |
CB |
H13 |
H14 |
239.4 |
240.0 |
H13 |
CB |
CAS |
H15 |
173.3 |
180.0 |
H13 |
CB |
CAS |
H16 |
294.5 |
300.0 |
CA |
CB |
H14 |
CAS |
118.9 |
120.0 |
H14 |
CB |
CA |
H9 |
187.5 |
295.0 |
CA |
CB |
H14 |
H13 |
239.4 |
240.0 |
H14 |
CB |
CAS |
CAT |
293.6 |
300.0 |
CAS |
CB |
H14 |
H13 |
120.6 |
120.0 |
H14 |
CB |
CAS |
H15 |
53.0 |
60.0 |
H14 |
CB |
CAS |
H16 |
174.2 |
180.0 |
CB |
CAS |
H15 |
CAT |
243.4 |
240.0 |
H15 |
CAS |
CB |
H13 |
173.3 |
180.0 |
H15 |
CAS |
CB |
H14 |
53.0 |
60.0 |
CB |
CAS |
H15 |
H16 |
121.7 |
120.0 |
H15 |
CAS |
CAT |
CAU |
45.0 |
60.1 |
CAT |
CAS |
H15 |
H16 |
238.3 |
240.0 |
H15 |
CAS |
CAT |
H17 |
165.1 |
180.1 |
H15 |
CAS |
CAT |
H18 |
285.0 |
300.0 |
CB |
CAS |
H16 |
CAT |
116.6 |
120.0 |
H16 |
CAS |
CB |
H13 |
294.5 |
300.0 |
H16 |
CAS |
CB |
H14 |
174.2 |
180.0 |
CB |
CAS |
H16 |
H15 |
238.3 |
240.0 |
H16 |
CAS |
CAT |
CAU |
283.8 |
300.0 |
CAT |
CAS |
H16 |
H15 |
121.7 |
120.0 |
H16 |
CAS |
CAT |
H17 |
43.9 |
60.0 |
H16 |
CAS |
CAT |
H18 |
163.8 |
180.0 |
CAS |
CAT |
H17 |
CAU |
239.4 |
240.0 |
H17 |
CAT |
CAS |
H15 |
165.1 |
180.1 |
H17 |
CAT |
CAS |
H16 |
43.9 |
60.0 |
CAS |
CAT |
H17 |
H18 |
119.7 |
120.0 |
H17 |
CAT |
CAU |
NAV |
58.5 |
60.0 |
CAU |
CAT |
H17 |
H18 |
240.3 |
240.0 |
H17 |
CAT |
CAU |
H19 |
178.5 |
180.0 |
H17 |
CAT |
CAU |
H20 |
298.4 |
299.9 |
CAS |
CAT |
H18 |
CAU |
120.6 |
120.0 |
H18 |
CAT |
CAS |
H15 |
285.0 |
300.0 |
H18 |
CAT |
CAS |
H16 |
163.8 |
180.0 |
CAS |
CAT |
H18 |
H17 |
240.3 |
240.0 |
H18 |
CAT |
CAU |
NAV |
298.6 |
300.0 |
CAU |
CAT |
H18 |
H17 |
119.7 |
120.0 |
H18 |
CAT |
CAU |
H19 |
58.7 |
60.0 |
H18 |
CAT |
CAU |
H20 |
178.6 |
180.0 |
CAT |
CAU |
H19 |
NAV |
239.5 |
240.0 |
H19 |
CAU |
CAT |
H17 |
178.5 |
180.0 |
H19 |
CAU |
CAT |
H18 |
58.7 |
60.0 |
CAT |
CAU |
H19 |
H20 |
119.7 |
120.0 |
H19 |
CAU |
NAV |
CAW |
98.2 |
60.1 |
NAV |
CAU |
H19 |
H20 |
240.3 |
240.0 |
H19 |
CAU |
NAV |
H21 |
278.2 |
240.0 |
CAT |
CAU |
H20 |
NAV |
120.5 |
120.1 |
H20 |
CAU |
CAT |
H17 |
298.4 |
299.9 |
H20 |
CAU |
CAT |
H18 |
178.6 |
180.0 |
CAT |
CAU |
H20 |
H19 |
240.2 |
240.1 |
H20 |
CAU |
NAV |
CAW |
338.3 |
300.1 |
NAV |
CAU |
H20 |
H19 |
119.7 |
120.0 |
H20 |
CAU |
NAV |
H21 |
158.3 |
120.0 |
CAU |
NAV |
H21 |
CAW |
180.0 |
180.0 |
H21 |
NAV |
CAU |
H19 |
278.2 |
240.0 |
H21 |
NAV |
CAU |
H20 |
158.3 |
120.0 |
H21 |
NAV |
CAW |
CAX |
357.2 |
0.0 |
H21 |
NAV |
CAW |
OAY |
178.1 |
180.0 |
CAW |
CAX |
H22 |
H23 |
120.0 |
120.0 |
CAW |
CAX |
H22 |
H24 |
240.0 |
240.0 |
H23 |
CAX |
H22 |
H24 |
120.0 |
119.9 |
CAW |
CAX |
H23 |
H22 |
240.0 |
240.0 |
CAW |
CAX |
H23 |
H24 |
120.0 |
120.0 |
H22 |
CAX |
H23 |
H24 |
240.0 |
240.0 |
CAW |
CAX |
H24 |
H22 |
120.0 |
120.0 |
CAW |
CAX |
H24 |
H23 |
240.0 |
240.0 |
H22 |
CAX |
H24 |
H23 |
120.0 |
119.9 |