PDB Chemical Component FCJ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for FCJ
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C2 |
N3 |
1.329 |
1.317 |
| C2 |
N1 |
1.365 |
1.321 |
| N3 |
C4 |
1.376 |
1.329 |
| N1 |
C6 |
1.361 |
1.328 |
| C4 |
C5 |
1.427 |
1.405 |
| C4 |
N9 |
1.382 |
1.372 |
| C6 |
N6 |
1.376 |
1.384 |
| C6 |
C5 |
1.397 |
1.405 |
| C2' |
C1' |
1.557 |
1.542 |
| C2' |
C3' |
1.521 |
1.550 |
| C1' |
N9 |
1.489 |
1.465 |
| C1' |
O4' |
1.425 |
1.438 |
| C5 |
N7 |
1.392 |
1.355 |
| N9 |
C8 |
1.400 |
1.363 |
| O3' |
C3' |
1.397 |
1.429 |
| C3' |
C4' |
1.519 |
1.550 |
| O4' |
C4' |
1.449 |
1.444 |
| N7 |
C8 |
1.343 |
1.301 |
| C4' |
C5' |
1.581 |
1.530 |
| O2B |
PB |
1.509 |
1.480 |
| C5' |
O5' |
1.323 |
1.429 |
| O5' |
PA |
1.806 |
1.610 |
| O3A |
PB |
1.771 |
1.610 |
| O3A |
PA |
1.548 |
1.610 |
| PB |
O1B |
1.500 |
1.610 |
| PB |
C3B |
1.690 |
1.823 |
| PA |
O2A |
1.524 |
1.479 |
| PA |
O1A |
1.503 |
1.610 |
| C3B |
PG |
1.914 |
1.823 |
| PG |
O3G |
1.512 |
1.480 |
| PG |
O1G |
1.514 |
1.610 |
| PG |
O2G |
1.531 |
1.610 |
| C8 |
H1 |
1.080 |
1.080 |
| O1A |
H2 |
0.950 |
0.967 |
| O1B |
H3 |
0.950 |
0.966 |
| C3B |
H4 |
1.100 |
1.090 |
| C3B |
H5 |
1.100 |
1.091 |
| O1G |
H6 |
0.950 |
0.967 |
| O2G |
H7 |
0.950 |
0.966 |
| C5' |
H8 |
1.100 |
1.089 |
| C5' |
H9 |
1.100 |
1.090 |
| C4' |
H10 |
1.100 |
1.090 |
| C1' |
H11 |
1.100 |
1.090 |
| C2 |
H12 |
1.080 |
1.080 |
| N6 |
H13 |
1.000 |
0.971 |
| N6 |
H14 |
1.000 |
0.969 |
| C2' |
H15 |
1.101 |
1.090 |
| C2' |
H16 |
1.100 |
1.089 |
| C3' |
H17 |
1.100 |
1.090 |
| O3' |
H18 |
0.950 |
0.967 |
Bond Angles for FCJ
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
N1 |
C6 |
116.0 |
121.2 |
| N1 |
C2 |
H12 |
114.9 |
118.8 |
| N3 |
C4 |
C5 |
123.8 |
119.1 |
| N1 |
C6 |
N6 |
116.5 |
120.8 |
| N1 |
C6 |
C5 |
120.6 |
118.5 |
| C4 |
C5 |
C6 |
117.1 |
118.2 |
| C4 |
C5 |
N7 |
110.3 |
107.1 |
| N6 |
C6 |
C5 |
122.9 |
120.7 |
| C6 |
N6 |
H13 |
109.5 |
120.0 |
| C6 |
N6 |
H14 |
109.5 |
120.0 |
| C6 |
C5 |
N7 |
132.6 |
134.7 |
| C2' |
C1' |
H11 |
110.5 |
110.0 |
| C3' |
C2' |
H15 |
111.3 |
110.3 |
| C3' |
C2' |
H16 |
111.3 |
110.6 |
| C2' |
C3' |
H17 |
110.3 |
110.9 |
| N9 |
C1' |
H11 |
111.4 |
109.9 |
| N9 |
C8 |
H1 |
123.2 |
125.0 |
| O3' |
C3' |
H17 |
112.2 |
110.8 |
| C3' |
C4' |
H10 |
108.4 |
110.6 |
| O4' |
C4' |
H10 |
109.3 |
110.6 |
| N7 |
C8 |
H1 |
123.2 |
125.0 |
| C4' |
C5' |
H8 |
109.5 |
109.5 |
| C4' |
C5' |
H9 |
109.5 |
109.5 |
| O2B |
PB |
O1B |
118.3 |
109.5 |
| O2B |
PB |
C3B |
114.0 |
109.5 |
| O3A |
PB |
O1B |
88.8 |
109.4 |
| O3A |
PB |
C3B |
112.3 |
109.5 |
| O1B |
PB |
C3B |
118.9 |
109.5 |
| PB |
O1B |
H3 |
109.5 |
114.0 |
| PB |
C3B |
PG |
122.0 |
109.5 |
| PB |
C3B |
H4 |
106.3 |
109.5 |
| PB |
C3B |
H5 |
106.2 |
109.5 |
| O1A |
PA |
O2A |
118.2 |
109.5 |
| PA |
O1A |
H2 |
109.5 |
114.0 |
| C3B |
PG |
O3G |
107.0 |
109.5 |
| C3B |
PG |
O1G |
105.6 |
109.5 |
| C3B |
PG |
O2G |
105.3 |
109.5 |
| PG |
C3B |
H4 |
106.2 |
109.5 |
| PG |
C3B |
H5 |
106.2 |
109.4 |
| O1G |
PG |
O3G |
115.3 |
109.5 |
| O2G |
PG |
O3G |
111.2 |
109.5 |
| O1G |
PG |
O2G |
111.6 |
109.5 |
| PG |
O1G |
H6 |
109.5 |
114.0 |
| PG |
O2G |
H7 |
109.5 |
114.0 |
| H4 |
C3B |
H5 |
109.4 |
109.5 |
| H8 |
C5' |
H9 |
109.5 |
109.5 |
| H13 |
N6 |
H14 |
109.4 |
120.0 |
| H15 |
C2' |
H16 |
109.5 |
110.6 |
Torsion Angles for FCJ
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
N3 |
C4 |
C5 |
359.2 |
0.0 |
| C2 |
N1 |
C6 |
N6 |
179.1 |
180.0 |
| C2 |
N1 |
C6 |
C5 |
358.7 |
360.0 |
| N3 |
C4 |
C5 |
C6 |
359.9 |
360.0 |
| N3 |
C4 |
C5 |
N7 |
180.8 |
180.0 |
| C6 |
N1 |
C2 |
H12 |
180.2 |
179.9 |
| C4 |
C5 |
C6 |
N1 |
1.2 |
0.0 |
| N6 |
C6 |
N1 |
C5 |
180.4 |
180.0 |
| N1 |
C6 |
N6 |
H13 |
0.0 |
360.0 |
| N1 |
C6 |
N6 |
H14 |
120.0 |
180.0 |
| N1 |
C6 |
C5 |
N7 |
180.0 |
180.0 |
| N1 |
C6 |
C5 |
C4 |
1.2 |
0.0 |
| N6 |
C6 |
C5 |
C4 |
180.8 |
180.0 |
| C6 |
C5 |
C4 |
N7 |
179.0 |
180.0 |
| C4 |
N9 |
C1' |
H11 |
330.5 |
324.5 |
| C4 |
N9 |
C8 |
H1 |
180.4 |
180.0 |
| N1 |
C6 |
N6 |
C5 |
179.6 |
180.0 |
| C4 |
C5 |
C6 |
N6 |
180.8 |
180.0 |
| N6 |
C6 |
C5 |
N7 |
359.6 |
360.0 |
| H13 |
N6 |
C6 |
H14 |
240.0 |
180.0 |
| N1 |
C6 |
C5 |
N6 |
180.4 |
180.0 |
| C4 |
C5 |
C6 |
N7 |
181.2 |
180.0 |
| C5 |
C6 |
N6 |
H13 |
180.4 |
180.0 |
| C5 |
C6 |
N6 |
H14 |
300.4 |
0.0 |
| N9 |
C1' |
C2' |
H11 |
237.4 |
238.9 |
| C3' |
C2' |
C1' |
H11 |
217.7 |
242.7 |
| O3' |
C3' |
C2' |
H17 |
236.2 |
236.4 |
| C2' |
C3' |
C4' |
H10 |
80.0 |
81.7 |
| H15 |
C2' |
C3' |
H16 |
122.5 |
122.7 |
| C2' |
C1' |
N9 |
H11 |
122.0 |
121.2 |
| C1' |
N9 |
C8 |
H1 |
358.7 |
0.0 |
| C1' |
O4' |
C4' |
H10 |
268.7 |
281.4 |
| C4 |
C5 |
N7 |
C6 |
178.8 |
180.0 |
| C5 |
N7 |
C8 |
H1 |
179.9 |
179.8 |
| N7 |
C8 |
N9 |
H1 |
180.0 |
180.3 |
| O3' |
C3' |
C2' |
H15 |
33.1 |
20.5 |
| O3' |
C3' |
C2' |
H16 |
270.6 |
257.8 |
| C2' |
C3' |
O3' |
H17 |
122.7 |
123.6 |
| O3' |
C3' |
C4' |
H10 |
323.0 |
323.5 |
| O4' |
C4' |
C3' |
H10 |
244.0 |
241.4 |
| C3' |
C4' |
C5' |
H8 |
182.4 |
62.8 |
| C3' |
C4' |
C5' |
H9 |
302.5 |
302.8 |
| C3' |
C4' |
O4' |
H10 |
115.3 |
118.6 |
| O4' |
C4' |
C5' |
H8 |
64.1 |
308.6 |
| O4' |
C4' |
C5' |
H9 |
184.1 |
188.6 |
| N9 |
C8 |
N7 |
H1 |
180.0 |
179.7 |
| H8 |
C5' |
C4' |
H9 |
239.9 |
120.0 |
| O3A |
PB |
O2B |
O1B |
266.6 |
240.0 |
| O3A |
PB |
O2B |
C3B |
119.4 |
120.0 |
| O1B |
PB |
O2B |
C3B |
212.7 |
240.0 |
| O2B |
PB |
O1B |
H3 |
360.0 |
180.0 |
| O2B |
PB |
C3B |
PG |
208.1 |
300.0 |
| O2B |
PB |
C3B |
H4 |
329.8 |
60.0 |
| O2B |
PB |
C3B |
H5 |
86.4 |
180.1 |
| O5' |
PA |
O1A |
H2 |
264.5 |
60.0 |
| O2B |
PB |
O3A |
O1B |
118.5 |
120.0 |
| O2B |
PB |
O3A |
C3B |
239.4 |
239.9 |
| O1B |
PB |
O3A |
C3B |
120.9 |
120.0 |
| O3A |
PB |
O1B |
H3 |
99.4 |
300.0 |
| O3A |
PB |
C3B |
PG |
96.7 |
180.0 |
| O3A |
PB |
C3B |
H4 |
218.5 |
300.0 |
| O3A |
PB |
C3B |
H5 |
335.0 |
60.0 |
| O3A |
PA |
O1A |
H2 |
161.0 |
300.0 |
| O2B |
PB |
O1B |
C3B |
145.6 |
120.0 |
| O3A |
PB |
O1B |
C3B |
245.0 |
240.0 |
| O1B |
PB |
C3B |
PG |
355.2 |
60.0 |
| O1B |
PB |
C3B |
H4 |
116.9 |
180.0 |
| O1B |
PB |
C3B |
H5 |
233.4 |
300.1 |
| O2B |
PB |
C3B |
O1B |
213.0 |
240.0 |
| O3A |
PB |
C3B |
O1B |
101.6 |
119.9 |
| C3B |
PB |
O1B |
H3 |
214.3 |
60.0 |
| PB |
C3B |
PG |
O3G |
99.3 |
60.0 |
| PB |
C3B |
PG |
O1G |
336.0 |
180.0 |
| PB |
C3B |
PG |
O2G |
217.8 |
300.0 |
| PG |
C3B |
PB |
H4 |
238.3 |
240.0 |
| PG |
C3B |
PB |
H5 |
121.7 |
120.0 |
| H4 |
C3B |
PB |
H5 |
243.5 |
240.0 |
| O2A |
PA |
O1A |
H2 |
0.0 |
180.0 |
| PB |
C3B |
PG |
H4 |
121.8 |
120.0 |
| PB |
C3B |
PG |
H5 |
238.3 |
240.0 |
| O1G |
PG |
C3B |
O3G |
236.6 |
120.0 |
| O2G |
PG |
C3B |
O3G |
118.4 |
240.0 |
| O1G |
PG |
C3B |
O2G |
118.2 |
240.0 |
| C3B |
PG |
O1G |
H6 |
117.9 |
180.0 |
| C3B |
PG |
O2G |
H7 |
244.5 |
300.0 |
| H4 |
C3B |
PG |
H5 |
116.5 |
120.0 |
| C3B |
PG |
O3G |
O1G |
242.9 |
120.0 |
| C3B |
PG |
O3G |
O2G |
114.5 |
240.0 |
| O3G |
PG |
C3B |
H4 |
337.6 |
300.0 |
| O3G |
PG |
C3B |
H5 |
221.1 |
180.0 |
| O1G |
PG |
O3G |
O2G |
231.6 |
120.0 |
| O3G |
PG |
O1G |
H6 |
360.0 |
300.0 |
| O3G |
PG |
O2G |
H7 |
0.0 |
180.0 |
| C3B |
PG |
O1G |
O3G |
117.9 |
240.0 |
| C3B |
PG |
O1G |
O2G |
246.1 |
120.0 |
| O1G |
PG |
C3B |
H4 |
214.2 |
60.0 |
| O1G |
PG |
C3B |
H5 |
97.7 |
300.0 |
| O2G |
PG |
O1G |
O3G |
231.8 |
120.0 |
| O1G |
PG |
O2G |
H7 |
130.4 |
60.0 |
| C3B |
PG |
O2G |
O3G |
244.5 |
120.0 |
| C3B |
PG |
O2G |
O1G |
114.1 |
240.0 |
| O2G |
PG |
C3B |
H4 |
96.0 |
180.0 |
| O2G |
PG |
C3B |
H5 |
339.5 |
60.0 |
| O1G |
PG |
O2G |
O3G |
130.3 |
240.0 |
| O2G |
PG |
O1G |
H6 |
231.8 |
60.0 |
| H2 |
O1A |
PA |
O2A |
0.0 |
180.0 |
| H3 |
O1B |
PB |
C3B |
214.3 |
60.0 |
| PB |
C3B |
H4 |
PG |
228.7 |
240.0 |
| PB |
C3B |
H4 |
H5 |
114.3 |
120.0 |
| H4 |
C3B |
PG |
O3G |
337.6 |
300.0 |
| H4 |
C3B |
PG |
O1G |
214.2 |
60.0 |
| H4 |
C3B |
PG |
O2G |
96.0 |
180.0 |
| PG |
C3B |
H4 |
H5 |
245.7 |
240.0 |
| PB |
C3B |
H5 |
PG |
131.3 |
120.0 |
| PB |
C3B |
H5 |
H4 |
245.6 |
240.0 |
| H5 |
C3B |
PG |
O3G |
221.1 |
180.0 |
| H5 |
C3B |
PG |
O1G |
97.7 |
300.0 |
| H5 |
C3B |
PG |
O2G |
339.5 |
60.0 |
| PG |
C3B |
H5 |
H4 |
114.3 |
120.0 |
| H6 |
O1G |
PG |
O3G |
360.0 |
300.0 |
| H6 |
O1G |
PG |
O2G |
231.8 |
60.0 |
| H7 |
O2G |
PG |
O3G |
0.0 |
180.0 |
| C4' |
C5' |
H8 |
H9 |
120.1 |
240.0 |
| C4' |
C5' |
H9 |
H8 |
239.9 |
120.0 |
| H10 |
C4' |
C5' |
H8 |
304.5 |
185.7 |
| H10 |
C4' |
C5' |
H9 |
64.6 |
65.7 |
| H12 |
C2 |
N1 |
C6 |
180.2 |
179.9 |
| H13 |
N6 |
C6 |
C5 |
180.4 |
180.0 |
| C6 |
N6 |
H13 |
H14 |
120.0 |
180.0 |
| H14 |
N6 |
C6 |
C5 |
300.4 |
0.0 |
| C6 |
N6 |
H14 |
H13 |
240.0 |
180.0 |
| H15 |
C2' |
C1' |
H11 |
336.4 |
1.2 |
| C3' |
C2' |
H15 |
H16 |
236.5 |
237.3 |
| H15 |
C2' |
C3' |
H17 |
156.9 |
144.1 |
| H16 |
C2' |
C1' |
H11 |
98.9 |
123.8 |
| C3' |
C2' |
H16 |
H15 |
123.5 |
122.5 |
| H16 |
C2' |
C3' |
H17 |
34.4 |
21.4 |
| H17 |
C3' |
C2' |
H15 |
156.9 |
144.1 |
| H17 |
C3' |
C2' |
H16 |
34.4 |
21.4 |
| H17 |
C3' |
C4' |
H10 |
198.1 |
199.8 |
| H18 |
O3' |
C3' |
H17 |
15.5 |
297.9 |