PDB Chemical Component F74

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for F74

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O3' C3' 1.425 1.429
OP1 P 1.512 1.480
C5' C4' 1.511 1.530
C5' O5' 1.417 1.429
C4' C3' 1.506 1.545
C4' O4' 1.429 1.444
C3' C2' 1.524 1.545
O5' P 1.598 1.610
P OP2 1.511 1.610
O4' C1' 1.431 1.444
C2' C1' 1.525 1.544
C1' N9 1.488 1.464
CL C8 1.732 1.736
N9 C8 1.340 1.365
N9 C4 1.332 1.362
C8 N7 1.350 1.303
C4 N3 1.350 1.372
C4 C5 1.477 1.390
N3 C2 1.354 1.359
N7 C5 1.347 1.354
N2 C2 1.355 1.369
C2 N1 1.348 1.315
C5 C6 1.479 1.467
N1 C6 1.338 1.342
C6 O6 1.251 1.221
OP2 H2 0.949 0.967
C5' H3 1.100 1.091
C5' H4 1.100 1.090
C4' H5 1.101 1.090
C3' H6 1.100 1.090
C2' H7 1.100 1.091
C2' H8 1.100 1.090
C1' H9 1.100 1.090
N3 H10 1.000 0.969
N2 H11 1.000 0.970
N2 H12 1.000 0.970
O3' H13 0.950 0.967
P OP3 1.608 1.610
OP3 H1 0.950 0.967

Bond Angles for F74

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O3' C3' H6 112.3 110.6
OP1 P OP2 120.7 109.4
OP1 P OP3 108.7 109.5
C5' C4' C3' 107.8 110.4
C5' C4' O4' 111.0 110.4
C4' C5' H3 109.2 109.4
C4' C5' H4 109.2 109.5
C5' C4' H5 110.0 110.3
C3' C4' O4' 106.6 104.8
C4' C3' C2' 105.3 104.0
C3' C4' H5 110.1 110.4
C4' C3' H6 111.1 110.5
C4' O4' C1' 111.2 105.3
O4' C4' H5 111.2 110.5
C3' C2' C1' 102.6 104.1
C2' C3' H6 110.8 110.5
C3' C2' H7 111.1 110.5
C3' C2' H8 111.2 110.5
O5' P OP3 102.2 109.4
P OP2 H2 109.5 114.0
OP2 P OP3 109.9 109.5
O4' C1' N9 105.5 110.4
O4' C1' H9 109.6 110.4
C2' C1' N9 118.2 110.4
C1' C2' H7 111.2 110.5
C1' C2' H8 111.1 110.6
C2' C1' H9 108.3 110.3
N9 C1' H9 108.7 110.3
N9 C8 N7 116.6 109.5
N9 C4 N3 133.2 134.7
C4 N3 C2 120.8 120.5
C4 N3 H10 119.6 119.7
N3 C2 N1 122.5 122.5
N2 C2 N1 119.2 118.8
C5 C6 O6 121.0 120.7
H3 C5' H4 109.5 109.5
H7 C2' H8 109.5 110.5
H11 N2 H12 120.0 120.0
P OP3 H1 109.5 113.9

Torsion Angles for F74

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O3' C3' C4' H5 21.1 336.3
C4' C3' O3' H6 239.5 237.3
C2' C3' O3' H6 125.8 122.7
O3' C3' C2' H7 204.9 237.3
O3' C3' C2' H8 327.1 359.9
O5' P OP1 OP3 110.3 240.0
OP1 P OP2 H2 360.0 179.9
OP2 P OP1 OP3 231.8 120.1
OP1 P OP3 H1 360.0 60.0
C3' C4' C5' O4' 116.4 115.3
C5' C4' C3' C2' 259.7 217.2
C3' C4' C5' H5 239.9 237.7
C5' C4' C3' H6 19.8 335.8
C5' C4' O4' C1' 114.9 159.3
O4' C4' C5' H5 123.5 122.4
H3 C5' C4' H4 240.3 120.0
C5' O5' P OP3 336.2 185.0
O3' C3' C4' H6 121.3 122.7
C5' C4' C3' O4' 240.8 241.2
C3' C4' C5' H3 280.7 65.0
C3' C4' C5' H4 40.4 305.0
C5' C4' C3' H5 120.0 122.2
C3' C4' O4' C1' 357.7 40.5
O4' C4' C3' H5 239.3 241.0
C4' C3' C2' C1' 332.8 0.1
C2' C3' C4' H6 239.9 241.3
C4' C3' C2' H7 91.7 118.7
C4' C3' C2' H8 213.9 241.4
C5' C4' O4' C3' 117.1 118.8
O4' C4' C5' H3 164.3 309.7
O4' C4' C5' H4 284.0 189.7
C5' C4' O4' H5 237.2 237.7
O4' C4' C3' C2' 19.0 336.0
C3' C4' O4' H5 120.0 118.9
O4' C4' C3' H6 139.0 94.6
C4' O4' C1' N9 218.3 200.6
C4' O4' C1' H9 101.4 78.3
O3' C3' C2' H6 233.4 237.3
C2' C3' C4' O4' 19.0 336.0
C2' C3' C4' H5 139.7 94.9
C4' C3' C2' H6 120.2 118.7
C3' C2' C1' N9 144.3 142.8
C1' C2' C3' H7 241.1 241.4
C1' C2' C3' H8 118.9 118.7
C3' C2' C1' H9 268.4 265.0
H7 C2' C3' H8 237.8 237.4
OP1 P O5' OP3 245.4 120.0
O5' P OP2 H2 123.0 60.0
OP2 P O5' OP3 114.9 240.0
O5' P OP3 H1 245.5 180.0
OP1 P OP2 OP3 127.6 239.9
O5' P OP2 OP3 250.6 120.0
OP2 P OP3 H1 134.0 300.0
C1' O4' C4' H5 237.7 281.6
C2' C1' O4' N9 126.3 118.9
O4' C1' C2' H7 267.2 265.3
O4' C1' C2' H8 145.0 142.6
C2' C1' O4' H9 243.2 241.2
N9 C1' O4' H9 116.9 122.3
C4' O4' C1' C2' 344.6 319.5
C1' C2' C3' H6 212.6 241.4
C3' C2' C1' H7 118.9 118.6
C3' C2' C1' H8 241.1 241.3
O4' C1' C2' N9 241.8 241.1
O4' C1' C2' H9 117.7 118.9
N9 C1' C2' H9 235.9 237.8
H7 C2' C1' H8 122.2 122.7
O4' C1' N9 H9 242.6 237.6
N9 C1' C2' H7 25.4 24.2
N9 C1' C2' H8 263.2 261.5
C2' C1' N9 H9 123.9 122.2
C1' N9 C8 N7 183.0 180.0
C1' N9 C4 N3 355.3 0.0
C4 N9 C8 N7 357.6 0.0
N9 C4 N3 C2 181.4 180.0
N9 C4 N3 H10 1.5 0.0
C4 N3 C2 N1 0.6 0.3
C4 C5 C6 O6 179.6 180.1
C4 N3 C2 H10 180.0 180.1
N2 C2 N3 N1 179.6 179.4
N3 C2 N2 N1 180.4 180.5
H2 OP2 P OP3 232.3 300.0
H3 C5' C4' C3' 280.7 65.0
H3 C5' C4' O4' 164.3 309.7
C4' C5' H3 H4 119.5 240.0
H3 C5' C4' H5 40.8 187.3
H4 C5' C4' C3' 40.4 305.0
H4 C5' C4' O4' 284.0 189.7
C4' C5' H4 H3 240.5 120.0
H4 C5' C4' H5 160.5 67.3
C5' C4' H5 C3' 241.3 237.8
C5' C4' H5 O4' 123.4 122.3
H5 C4' C5' H3 40.8 187.3
H5 C4' C5' H4 160.5 67.3
C3' C4' H5 O4' 242.1 244.6
H5 C4' C3' C2' 139.7 94.9
H5 C4' C3' H6 259.8 213.6
H5 C4' O4' C1' 237.7 281.6
H6 C3' C4' O4' 139.0 94.6
C4' C3' H6 C2' 243.3 245.4
H6 C3' C4' H5 259.8 213.6
H6 C3' C2' C1' 212.6 241.4
H6 C3' C2' H7 331.5 0.0
H6 C3' C2' H8 93.7 122.7
C3' C2' H7 C1' 246.3 245.3
H7 C2' C3' H6 331.5 0.0
C3' C2' H7 H8 123.2 122.6
H7 C2' C1' N9 25.4 24.2
C1' C2' H7 H8 236.8 237.3
H7 C2' C1' H9 149.5 146.4
C3' C2' H8 C1' 113.6 114.7
H8 C2' C3' H6 93.7 122.7
C3' C2' H8 H7 236.8 237.4
H8 C2' C1' N9 263.2 261.5
C1' C2' H8 H7 123.2 122.7
H8 C2' C1' H9 27.4 23.7
O4' C1' H9 N9 114.8 122.3
C2' C1' H9 N9 230.4 237.7
H9 C1' C2' H7 149.5 146.4
H9 C1' C2' H8 27.4 23.7
C4 N3 H10 C2 180.0 179.9
H10 N3 C2 N1 180.6 180.3
H11 N2 C2 N1 360.0 0.0
H12 N2 C2 N1 180.0 179.9
H13 O3' C3' H6 300.5 302.7
OP1 P OP3 OP2 226.0 120.0
OP3 P OP2 H2 232.3 300.0