PDB Chemical Component F6R
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for F6R
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.516 |
1.507 |
C1 |
O1 |
1.441 |
1.428 |
C1 |
H1C1 |
1.100 |
1.090 |
C1 |
H1C2 |
1.100 |
1.090 |
C2 |
C3 |
1.534 |
1.507 |
C2 |
O2 |
1.211 |
1.208 |
C3 |
C4 |
1.542 |
1.530 |
C3 |
O3 |
1.417 |
1.429 |
C3 |
H3 |
1.100 |
1.090 |
C4 |
C5 |
1.520 |
1.530 |
C4 |
O4 |
1.424 |
1.430 |
C4 |
H4 |
1.100 |
1.090 |
C5 |
C6 |
1.524 |
1.529 |
C5 |
O5 |
1.422 |
1.429 |
C5 |
H5 |
1.100 |
1.090 |
C6 |
O6 |
1.436 |
1.428 |
C6 |
H6C1 |
1.100 |
1.090 |
C6 |
H6C2 |
1.100 |
1.090 |
O1 |
H1 |
0.950 |
0.968 |
O3 |
HA |
0.950 |
0.967 |
O4 |
HB |
0.950 |
0.966 |
O5 |
HC |
0.950 |
0.967 |
O6 |
P |
1.595 |
1.610 |
P |
O1P |
1.504 |
1.610 |
P |
O2P |
1.505 |
1.610 |
P |
O3P |
1.494 |
1.479 |
HO1 |
O1P |
0.950 |
0.967 |
HO2 |
O2P |
0.951 |
0.967 |
Bond Angles for F6R
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
O1 |
112.0 |
109.5 |
C2 |
C1 |
H1C1 |
108.8 |
109.5 |
C2 |
C1 |
H1C2 |
108.8 |
109.4 |
C1 |
C2 |
C3 |
125.5 |
120.0 |
C1 |
C2 |
O2 |
116.3 |
120.0 |
O1 |
C1 |
H1C1 |
108.8 |
109.5 |
O1 |
C1 |
H1C2 |
108.8 |
109.5 |
C1 |
O1 |
H1 |
109.5 |
114.0 |
H1C1 |
C1 |
H1C2 |
109.5 |
109.5 |
C3 |
C2 |
O2 |
118.1 |
120.0 |
C2 |
C3 |
C4 |
113.7 |
109.4 |
C2 |
C3 |
O3 |
108.4 |
109.5 |
C2 |
C3 |
H3 |
109.0 |
109.5 |
C4 |
C3 |
O3 |
105.9 |
109.4 |
C4 |
C3 |
H3 |
109.0 |
109.5 |
C3 |
C4 |
C5 |
113.6 |
109.5 |
C3 |
C4 |
O4 |
108.2 |
109.5 |
C3 |
C4 |
H4 |
108.0 |
109.5 |
O3 |
C3 |
H3 |
110.7 |
109.6 |
C3 |
O3 |
HA |
109.5 |
114.0 |
C5 |
C4 |
O4 |
109.2 |
109.4 |
C5 |
C4 |
H4 |
108.2 |
109.5 |
C4 |
C5 |
C6 |
111.6 |
109.5 |
C4 |
C5 |
O5 |
111.9 |
109.4 |
C4 |
C5 |
H5 |
107.2 |
109.4 |
O4 |
C4 |
H4 |
109.5 |
109.5 |
C4 |
O4 |
HB |
109.5 |
114.0 |
C6 |
C5 |
O5 |
110.4 |
109.5 |
C6 |
C5 |
H5 |
107.1 |
109.5 |
C5 |
C6 |
O6 |
108.5 |
109.5 |
C5 |
C6 |
H6C1 |
109.7 |
109.5 |
C5 |
C6 |
H6C2 |
109.7 |
109.5 |
O5 |
C5 |
H5 |
108.4 |
109.4 |
C5 |
O5 |
HC |
109.5 |
114.0 |
O6 |
C6 |
H6C1 |
109.7 |
109.5 |
O6 |
C6 |
H6C2 |
109.7 |
109.5 |
C6 |
O6 |
P |
119.1 |
123.0 |
H6C1 |
C6 |
H6C2 |
109.5 |
109.4 |
O6 |
P |
O1P |
106.6 |
109.5 |
O6 |
P |
O2P |
106.0 |
109.5 |
O6 |
P |
O3P |
106.7 |
109.5 |
O1P |
P |
O2P |
111.0 |
109.4 |
O1P |
P |
O3P |
112.0 |
109.5 |
O2P |
P |
O3P |
113.9 |
109.5 |
Torsion Angles for F6R
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
C1 |
C2 |
H1C1 |
239.6 |
240.0 |
O1 |
C1 |
C2 |
H1C2 |
120.4 |
120.0 |
C2 |
C1 |
O1 |
H1 |
350.6 |
180.0 |
H1C1 |
C1 |
C2 |
H1C2 |
240.8 |
240.0 |
C3 |
C2 |
C1 |
O2 |
177.2 |
180.0 |
C1 |
C2 |
C3 |
C4 |
344.2 |
285.0 |
C1 |
C2 |
C3 |
O3 |
226.6 |
165.0 |
C1 |
C2 |
C3 |
H3 |
106.0 |
44.9 |
C2 |
C1 |
O1 |
H1C1 |
120.4 |
120.0 |
C2 |
C1 |
O1 |
H1C2 |
239.6 |
240.0 |
O1 |
C1 |
C2 |
C3 |
197.6 |
180.0 |
O1 |
C1 |
C2 |
O2 |
20.4 |
360.0 |
H1C1 |
C1 |
O1 |
H1C2 |
119.2 |
120.0 |
C2 |
C1 |
H1C1 |
O1 |
237.6 |
240.0 |
C2 |
C1 |
H1C1 |
H1C2 |
118.8 |
120.0 |
H1C1 |
C1 |
C2 |
C3 |
318.0 |
300.0 |
H1C1 |
C1 |
C2 |
O2 |
140.8 |
120.0 |
O1 |
C1 |
H1C1 |
H1C2 |
241.2 |
240.0 |
H1C1 |
C1 |
O1 |
H1 |
230.2 |
60.0 |
C2 |
C1 |
H1C2 |
O1 |
122.4 |
120.0 |
C2 |
C1 |
H1C2 |
H1C1 |
241.2 |
240.0 |
H1C2 |
C1 |
C2 |
C3 |
77.2 |
60.0 |
H1C2 |
C1 |
C2 |
O2 |
260.0 |
240.0 |
O1 |
C1 |
H1C2 |
H1C1 |
118.8 |
120.1 |
H1C2 |
C1 |
O1 |
H1 |
111.0 |
299.9 |
C3 |
C2 |
C1 |
O1 |
197.6 |
180.0 |
C3 |
C2 |
C1 |
H1C1 |
318.0 |
300.0 |
C3 |
C2 |
C1 |
H1C2 |
77.2 |
60.0 |
C1 |
C2 |
C3 |
O2 |
182.8 |
180.0 |
C4 |
C3 |
C2 |
O3 |
117.6 |
119.9 |
C4 |
C3 |
C2 |
H3 |
238.2 |
240.0 |
C2 |
C3 |
C4 |
C5 |
181.3 |
185.0 |
C2 |
C3 |
C4 |
O4 |
302.8 |
305.0 |
C2 |
C3 |
C4 |
H4 |
61.2 |
65.0 |
O3 |
C3 |
C2 |
H3 |
120.6 |
120.1 |
C2 |
C3 |
O3 |
HA |
341.8 |
60.0 |
O2 |
C2 |
C1 |
O1 |
20.4 |
360.0 |
O2 |
C2 |
C1 |
H1C1 |
140.8 |
120.0 |
O2 |
C2 |
C1 |
H1C2 |
260.0 |
240.0 |
C1 |
C2 |
O2 |
C3 |
177.4 |
180.0 |
O2 |
C2 |
C3 |
C4 |
161.3 |
105.0 |
O2 |
C2 |
C3 |
O3 |
43.7 |
345.1 |
O2 |
C2 |
C3 |
H3 |
283.1 |
225.0 |
C4 |
C3 |
C2 |
O2 |
161.3 |
105.0 |
C2 |
C3 |
C4 |
O3 |
241.0 |
240.0 |
C2 |
C3 |
C4 |
H3 |
121.8 |
120.0 |
O3 |
C3 |
C4 |
H3 |
240.9 |
239.9 |
C4 |
C3 |
O3 |
HA |
219.3 |
300.0 |
C5 |
C4 |
C3 |
O4 |
238.5 |
240.0 |
C5 |
C4 |
C3 |
H4 |
120.1 |
120.0 |
C3 |
C4 |
C5 |
C6 |
182.2 |
180.0 |
C3 |
C4 |
C5 |
O5 |
306.5 |
300.0 |
C3 |
C4 |
C5 |
H5 |
65.2 |
59.9 |
O4 |
C4 |
C3 |
H4 |
241.5 |
240.0 |
C3 |
C4 |
O4 |
HB |
180.0 |
300.0 |
O3 |
C3 |
C2 |
O2 |
43.7 |
345.1 |
C2 |
C3 |
O3 |
C4 |
122.5 |
119.9 |
C2 |
C3 |
O3 |
H3 |
240.4 |
240.0 |
C4 |
C3 |
O3 |
H3 |
118.0 |
120.0 |
O3 |
C3 |
C4 |
C5 |
300.3 |
305.0 |
O3 |
C3 |
C4 |
O4 |
61.8 |
64.9 |
O3 |
C3 |
C4 |
H4 |
180.3 |
185.0 |
H3 |
C3 |
C2 |
O2 |
283.1 |
225.0 |
C2 |
C3 |
H3 |
C4 |
235.3 |
240.1 |
C2 |
C3 |
H3 |
O3 |
119.2 |
120.0 |
C4 |
C3 |
H3 |
O3 |
243.9 |
240.0 |
H3 |
C3 |
C4 |
C5 |
59.4 |
65.1 |
H3 |
C3 |
C4 |
O4 |
180.9 |
185.0 |
H3 |
C3 |
C4 |
H4 |
299.4 |
305.0 |
H3 |
C3 |
O3 |
HA |
101.3 |
180.0 |
C5 |
C4 |
C3 |
O3 |
300.3 |
305.0 |
C5 |
C4 |
C3 |
H3 |
59.4 |
65.1 |
C3 |
C4 |
C5 |
O4 |
120.9 |
120.0 |
C3 |
C4 |
C5 |
H4 |
240.1 |
240.0 |
O4 |
C4 |
C5 |
H4 |
119.2 |
120.0 |
C5 |
C4 |
O4 |
HB |
304.1 |
60.0 |
C6 |
C5 |
C4 |
O5 |
235.7 |
240.0 |
C6 |
C5 |
C4 |
H5 |
117.0 |
120.0 |
C4 |
C5 |
C6 |
O6 |
66.0 |
185.0 |
C4 |
C5 |
C6 |
H6C1 |
185.9 |
305.0 |
C4 |
C5 |
C6 |
H6C2 |
306.2 |
65.0 |
O5 |
C5 |
C4 |
H5 |
241.3 |
240.1 |
C4 |
C5 |
O5 |
HC |
180.0 |
299.9 |
O4 |
C4 |
C3 |
O3 |
61.8 |
64.9 |
O4 |
C4 |
C3 |
H3 |
180.9 |
185.0 |
C3 |
C4 |
O4 |
C5 |
235.9 |
240.0 |
C3 |
C4 |
O4 |
H4 |
117.5 |
120.0 |
C5 |
C4 |
O4 |
H4 |
241.6 |
240.0 |
O4 |
C4 |
C5 |
C6 |
61.3 |
60.0 |
O4 |
C4 |
C5 |
O5 |
185.6 |
180.0 |
O4 |
C4 |
C5 |
H5 |
304.3 |
300.0 |
H4 |
C4 |
C3 |
O3 |
180.3 |
185.0 |
H4 |
C4 |
C3 |
H3 |
299.4 |
305.0 |
C3 |
C4 |
H4 |
C5 |
123.4 |
120.0 |
C3 |
C4 |
H4 |
O4 |
242.4 |
240.0 |
C5 |
C4 |
H4 |
O4 |
119.0 |
119.9 |
H4 |
C4 |
C5 |
C6 |
302.1 |
300.0 |
H4 |
C4 |
C5 |
O5 |
66.4 |
60.1 |
H4 |
C4 |
C5 |
H5 |
185.1 |
180.0 |
H4 |
C4 |
O4 |
HB |
62.5 |
180.0 |
C6 |
C5 |
C4 |
O4 |
61.3 |
60.0 |
C6 |
C5 |
C4 |
H4 |
302.1 |
300.0 |
C4 |
C5 |
C6 |
O5 |
125.1 |
120.0 |
C4 |
C5 |
C6 |
H5 |
242.9 |
240.0 |
O5 |
C5 |
C6 |
H5 |
117.8 |
120.0 |
C6 |
C5 |
O5 |
HC |
305.0 |
60.0 |
O6 |
C6 |
C5 |
H6C1 |
240.1 |
240.0 |
O6 |
C6 |
C5 |
H6C2 |
119.8 |
120.0 |
C5 |
C6 |
O6 |
P |
190.1 |
180.0 |
H6C1 |
C6 |
C5 |
H6C2 |
239.7 |
240.0 |
O5 |
C5 |
C4 |
O4 |
185.6 |
180.0 |
O5 |
C5 |
C4 |
H4 |
66.4 |
60.1 |
C4 |
C5 |
O5 |
C6 |
235.1 |
239.9 |
C4 |
C5 |
O5 |
H5 |
118.0 |
119.9 |
C6 |
C5 |
O5 |
H5 |
242.9 |
240.0 |
O5 |
C5 |
C6 |
O6 |
300.9 |
65.0 |
O5 |
C5 |
C6 |
H6C1 |
60.8 |
185.0 |
O5 |
C5 |
C6 |
H6C2 |
181.1 |
305.0 |
H5 |
C5 |
C4 |
O4 |
304.3 |
300.0 |
H5 |
C5 |
C4 |
H4 |
185.1 |
180.0 |
C4 |
C5 |
H5 |
C6 |
119.9 |
120.0 |
C4 |
C5 |
H5 |
O5 |
239.1 |
240.1 |
C6 |
C5 |
H5 |
O5 |
119.1 |
120.0 |
H5 |
C5 |
C6 |
O6 |
183.1 |
305.0 |
H5 |
C5 |
C6 |
H6C1 |
302.9 |
65.0 |
H5 |
C5 |
C6 |
H6C2 |
63.2 |
185.0 |
H5 |
C5 |
O5 |
HC |
62.0 |
180.0 |
O6 |
C6 |
C5 |
O5 |
300.9 |
65.0 |
O6 |
C6 |
C5 |
H5 |
183.1 |
305.0 |
C5 |
C6 |
O6 |
H6C1 |
119.9 |
120.0 |
C5 |
C6 |
O6 |
H6C2 |
240.2 |
240.0 |
H6C1 |
C6 |
O6 |
H6C2 |
120.3 |
120.0 |
C6 |
O6 |
P |
O1P |
69.2 |
65.1 |
C6 |
O6 |
P |
O2P |
310.8 |
185.0 |
C6 |
O6 |
P |
O3P |
189.1 |
305.0 |
H6C1 |
C6 |
C5 |
O5 |
60.8 |
185.0 |
H6C1 |
C6 |
C5 |
H5 |
302.9 |
65.0 |
C5 |
C6 |
H6C1 |
O6 |
240.9 |
240.0 |
C5 |
C6 |
H6C1 |
H6C2 |
120.4 |
120.0 |
O6 |
C6 |
H6C1 |
H6C2 |
239.6 |
240.0 |
H6C1 |
C6 |
O6 |
P |
70.2 |
60.0 |
H6C2 |
C6 |
C5 |
O5 |
181.1 |
305.0 |
H6C2 |
C6 |
C5 |
H5 |
63.2 |
185.0 |
C5 |
C6 |
H6C2 |
O6 |
119.1 |
120.0 |
C5 |
C6 |
H6C2 |
H6C1 |
239.5 |
240.0 |
O6 |
C6 |
H6C2 |
H6C1 |
120.4 |
120.0 |
H6C2 |
C6 |
O6 |
P |
309.9 |
300.0 |
H1 |
O1 |
C1 |
H1C1 |
230.2 |
60.0 |
H1 |
O1 |
C1 |
H1C2 |
111.0 |
299.9 |
HA |
O3 |
C3 |
H3 |
101.3 |
180.0 |
HB |
O4 |
C4 |
H4 |
62.5 |
180.0 |
HC |
O5 |
C5 |
H5 |
62.0 |
180.0 |
P |
O6 |
C6 |
H6C1 |
70.2 |
60.0 |
P |
O6 |
C6 |
H6C2 |
309.9 |
300.0 |
O1P |
P |
O6 |
O2P |
118.4 |
240.1 |
O1P |
P |
O6 |
O3P |
240.1 |
120.0 |
O2P |
P |
O6 |
O3P |
121.7 |
240.0 |
O6 |
P |
O1P |
O2P |
245.0 |
120.0 |
O6 |
P |
O1P |
O3P |
116.4 |
240.0 |
O2P |
P |
O1P |
O3P |
231.4 |
120.0 |
O6 |
P |
O2P |
O1P |
115.4 |
240.0 |
O6 |
P |
O2P |
O3P |
243.0 |
120.0 |
O1P |
P |
O2P |
O3P |
127.6 |
240.0 |
O6 |
P |
O3P |
O1P |
243.7 |
120.0 |
O6 |
P |
O3P |
O2P |
116.6 |
240.0 |
O1P |
P |
O3P |
O2P |
232.9 |
120.0 |