PDB Chemical Component F6F
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for F6F
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C1 |
C2 |
1.437 |
1.390 |
| C1 |
C6 |
1.407 |
1.389 |
| C1 |
O7 |
1.378 |
1.358 |
| C2 |
C3 |
1.437 |
1.377 |
| C2 |
H2 |
1.080 |
1.080 |
| C3 |
C4 |
1.394 |
1.397 |
| C3 |
H3 |
1.080 |
1.080 |
| C4 |
C5 |
1.573 |
1.397 |
| C4 |
C12 |
1.496 |
1.476 |
| C5 |
C6 |
1.430 |
1.377 |
| C5 |
H5 |
1.080 |
1.081 |
| C6 |
H6 |
1.080 |
1.080 |
| O7 |
C8 |
1.501 |
1.430 |
| C8 |
F9 |
1.244 |
1.399 |
| C8 |
F10 |
1.229 |
1.399 |
| C8 |
F11 |
1.361 |
1.399 |
| C12 |
N13 |
1.373 |
1.347 |
| C12 |
O14 |
1.185 |
1.215 |
| N13 |
C15 |
1.474 |
1.465 |
| N13 |
H13 |
1.000 |
0.971 |
| C15 |
C16 |
1.436 |
1.529 |
| C15 |
H151 |
1.100 |
1.090 |
| C15 |
H152 |
1.100 |
1.090 |
| C16 |
O17 |
1.475 |
1.429 |
| C16 |
H161 |
1.100 |
1.090 |
| C16 |
H162 |
1.100 |
1.090 |
| O17 |
P18 |
1.504 |
1.610 |
| P18 |
O19 |
1.507 |
1.610 |
| P18 |
O20 |
1.572 |
1.480 |
| P18 |
O21 |
1.430 |
1.610 |
| O19 |
H19 |
0.950 |
0.967 |
| O21 |
H21 |
0.950 |
0.967 |
Bond Angles for F6F
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
C1 |
C6 |
120.4 |
120.2 |
| C2 |
C1 |
O7 |
125.3 |
119.9 |
| C1 |
C2 |
C3 |
122.2 |
120.0 |
| C1 |
C2 |
H2 |
118.9 |
120.0 |
| C6 |
C1 |
O7 |
114.3 |
119.9 |
| C1 |
C6 |
C5 |
121.4 |
120.1 |
| C1 |
C6 |
H6 |
119.3 |
120.0 |
| C1 |
O7 |
C8 |
115.2 |
106.8 |
| C3 |
C2 |
H2 |
118.9 |
120.0 |
| C2 |
C3 |
C4 |
119.2 |
119.9 |
| C2 |
C3 |
H3 |
120.4 |
120.0 |
| C4 |
C3 |
H3 |
120.4 |
120.1 |
| C3 |
C4 |
C5 |
119.8 |
119.8 |
| C3 |
C4 |
C12 |
118.8 |
120.1 |
| C5 |
C4 |
C12 |
121.4 |
120.1 |
| C4 |
C5 |
C6 |
117.0 |
119.9 |
| C4 |
C5 |
H5 |
121.5 |
120.0 |
| C4 |
C12 |
N13 |
113.2 |
120.0 |
| C4 |
C12 |
O14 |
122.6 |
120.0 |
| C6 |
C5 |
H5 |
121.5 |
120.1 |
| C5 |
C6 |
H6 |
119.3 |
119.9 |
| O7 |
C8 |
F9 |
118.0 |
109.5 |
| O7 |
C8 |
F10 |
95.8 |
109.4 |
| O7 |
C8 |
F11 |
109.8 |
109.5 |
| F9 |
C8 |
F10 |
120.4 |
109.5 |
| F9 |
C8 |
F11 |
103.1 |
109.4 |
| F10 |
C8 |
F11 |
109.6 |
109.5 |
| N13 |
C12 |
O14 |
124.0 |
120.0 |
| C12 |
N13 |
C15 |
120.1 |
120.0 |
| C12 |
N13 |
H13 |
120.0 |
120.0 |
| C15 |
N13 |
H13 |
120.0 |
119.9 |
| N13 |
C15 |
C16 |
110.3 |
109.5 |
| N13 |
C15 |
H151 |
109.1 |
109.4 |
| N13 |
C15 |
H152 |
109.2 |
109.5 |
| C16 |
C15 |
H151 |
109.0 |
109.5 |
| C16 |
C15 |
H152 |
109.2 |
109.5 |
| C15 |
C16 |
O17 |
109.7 |
109.5 |
| C15 |
C16 |
H161 |
109.3 |
109.5 |
| C15 |
C16 |
H162 |
109.4 |
109.5 |
| H151 |
C15 |
H152 |
110.1 |
109.4 |
| O17 |
C16 |
H161 |
109.3 |
109.4 |
| O17 |
C16 |
H162 |
109.4 |
109.5 |
| C16 |
O17 |
P18 |
122.2 |
106.8 |
| H161 |
C16 |
H162 |
109.7 |
109.5 |
| O17 |
P18 |
O19 |
108.0 |
109.4 |
| O17 |
P18 |
O20 |
104.4 |
109.5 |
| O17 |
P18 |
O21 |
119.1 |
109.5 |
| O19 |
P18 |
O20 |
109.5 |
109.5 |
| O19 |
P18 |
O21 |
107.0 |
109.5 |
| P18 |
O19 |
H19 |
109.5 |
106.8 |
| O20 |
P18 |
O21 |
108.6 |
109.5 |
| P18 |
O21 |
H21 |
109.5 |
106.8 |
Torsion Angles for F6F
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C6 |
C1 |
C2 |
O7 |
180.2 |
180.0 |
| C2 |
C1 |
C6 |
C5 |
359.7 |
360.0 |
| C2 |
C1 |
C6 |
H6 |
179.7 |
180.1 |
| C2 |
C1 |
O7 |
C8 |
42.6 |
359.9 |
| C3 |
C2 |
C1 |
H2 |
180.0 |
179.7 |
| C1 |
C2 |
C3 |
C4 |
359.8 |
0.5 |
| C1 |
C2 |
C3 |
H3 |
179.8 |
180.1 |
| C2 |
C1 |
C6 |
O7 |
179.8 |
180.0 |
| C6 |
C1 |
C2 |
C3 |
0.3 |
359.7 |
| C6 |
C1 |
C2 |
H2 |
180.3 |
180.0 |
| C6 |
C1 |
O7 |
C8 |
222.4 |
180.0 |
| C4 |
C5 |
C6 |
C1 |
0.2 |
0.0 |
| C1 |
C6 |
C5 |
H5 |
180.2 |
180.0 |
| C5 |
C6 |
C1 |
H6 |
180.0 |
179.9 |
| C2 |
C1 |
O7 |
C6 |
180.2 |
180.0 |
| O7 |
C1 |
C2 |
C3 |
180.1 |
179.8 |
| O7 |
C1 |
C2 |
H2 |
0.1 |
0.1 |
| O7 |
C1 |
C6 |
C5 |
179.9 |
179.9 |
| O7 |
C1 |
C6 |
H6 |
359.9 |
0.0 |
| C1 |
O7 |
C8 |
F9 |
37.8 |
60.0 |
| C1 |
O7 |
C8 |
F10 |
268.8 |
180.0 |
| C1 |
O7 |
C8 |
F11 |
155.5 |
300.1 |
| C3 |
C2 |
C1 |
C6 |
0.3 |
359.7 |
| C3 |
C2 |
C1 |
O7 |
180.1 |
179.8 |
| C1 |
C2 |
C3 |
H2 |
180.0 |
180.3 |
| C4 |
C3 |
C2 |
H3 |
180.0 |
180.4 |
| C2 |
C3 |
C4 |
C5 |
0.1 |
359.5 |
| C2 |
C3 |
C4 |
C12 |
179.4 |
179.8 |
| H2 |
C2 |
C1 |
C6 |
180.3 |
180.0 |
| H2 |
C2 |
C1 |
O7 |
0.1 |
0.1 |
| C1 |
C2 |
H2 |
C3 |
180.0 |
179.7 |
| H2 |
C2 |
C3 |
C4 |
179.8 |
180.2 |
| H2 |
C2 |
C3 |
H3 |
359.8 |
359.8 |
| C4 |
C3 |
C2 |
H2 |
179.8 |
180.2 |
| C2 |
C3 |
C4 |
H3 |
180.0 |
179.6 |
| C5 |
C4 |
C3 |
C12 |
180.7 |
179.7 |
| C3 |
C4 |
C5 |
C6 |
359.9 |
0.3 |
| C3 |
C4 |
C5 |
H5 |
179.9 |
180.2 |
| C3 |
C4 |
C12 |
N13 |
198.4 |
359.7 |
| C3 |
C4 |
C12 |
O14 |
14.5 |
179.8 |
| H3 |
C3 |
C2 |
H2 |
359.8 |
359.8 |
| C2 |
C3 |
H3 |
C4 |
180.0 |
180.4 |
| H3 |
C3 |
C4 |
C5 |
180.1 |
179.9 |
| H3 |
C3 |
C4 |
C12 |
359.4 |
0.2 |
| C1 |
C6 |
C5 |
C4 |
0.2 |
0.0 |
| C5 |
C4 |
C3 |
H3 |
180.1 |
179.9 |
| C3 |
C4 |
C5 |
C12 |
179.3 |
180.3 |
| C5 |
C4 |
C12 |
N13 |
17.7 |
180.0 |
| C5 |
C4 |
C12 |
O14 |
193.7 |
0.1 |
| C6 |
C5 |
C4 |
H5 |
180.0 |
180.0 |
| C4 |
C5 |
C6 |
H6 |
180.2 |
179.9 |
| C12 |
C4 |
C3 |
H3 |
359.4 |
0.2 |
| C3 |
C4 |
C12 |
C5 |
180.7 |
179.7 |
| C12 |
C4 |
C5 |
C6 |
180.6 |
180.0 |
| C12 |
C4 |
C5 |
H5 |
0.6 |
360.0 |
| N13 |
C12 |
C4 |
O14 |
184.0 |
180.0 |
| C4 |
C12 |
N13 |
C15 |
167.1 |
180.0 |
| C4 |
C12 |
N13 |
H13 |
347.1 |
0.0 |
| C5 |
C6 |
C1 |
O7 |
179.9 |
179.9 |
| C1 |
C6 |
C5 |
H6 |
180.0 |
180.1 |
| C6 |
C5 |
C4 |
C12 |
180.6 |
180.0 |
| C4 |
C5 |
C6 |
H5 |
180.0 |
180.0 |
| H5 |
C5 |
C4 |
C12 |
0.6 |
360.0 |
| C4 |
C5 |
H5 |
C6 |
180.0 |
180.0 |
| H5 |
C5 |
C6 |
H6 |
0.2 |
359.9 |
| H6 |
C6 |
C1 |
O7 |
359.9 |
0.0 |
| C1 |
C6 |
H6 |
C5 |
180.0 |
179.9 |
| H6 |
C6 |
C5 |
H5 |
0.2 |
359.9 |
| F9 |
C8 |
O7 |
F10 |
129.0 |
240.0 |
| F9 |
C8 |
O7 |
F11 |
242.3 |
120.0 |
| F10 |
C8 |
O7 |
F11 |
113.3 |
240.0 |
| O7 |
C8 |
F9 |
F10 |
243.6 |
120.0 |
| O7 |
C8 |
F9 |
F11 |
121.2 |
240.0 |
| F10 |
C8 |
F9 |
F11 |
237.6 |
120.0 |
| O7 |
C8 |
F10 |
F9 |
127.3 |
240.0 |
| O7 |
C8 |
F10 |
F11 |
246.5 |
120.0 |
| F9 |
C8 |
F10 |
F11 |
119.2 |
240.0 |
| O7 |
C8 |
F11 |
F9 |
233.4 |
120.0 |
| O7 |
C8 |
F11 |
F10 |
104.1 |
240.0 |
| F9 |
C8 |
F11 |
F10 |
230.7 |
120.0 |
| C4 |
C12 |
N13 |
O14 |
176.0 |
180.0 |
| C15 |
N13 |
C12 |
H13 |
180.0 |
180.0 |
| C12 |
N13 |
C15 |
C16 |
283.2 |
180.0 |
| C12 |
N13 |
C15 |
H151 |
163.5 |
60.0 |
| C12 |
N13 |
C15 |
H152 |
43.2 |
300.0 |
| C4 |
C12 |
O14 |
N13 |
184.4 |
180.0 |
| O14 |
C12 |
N13 |
C15 |
351.2 |
360.0 |
| O14 |
C12 |
N13 |
H13 |
171.2 |
180.0 |
| C15 |
N13 |
C12 |
O14 |
351.2 |
360.0 |
| C12 |
N13 |
C15 |
H13 |
180.0 |
180.0 |
| C16 |
C15 |
N13 |
H151 |
119.7 |
120.0 |
| C16 |
C15 |
N13 |
H152 |
240.0 |
239.9 |
| N13 |
C15 |
C16 |
O17 |
285.4 |
65.0 |
| N13 |
C15 |
C16 |
H161 |
165.6 |
305.0 |
| N13 |
C15 |
C16 |
H162 |
45.4 |
185.0 |
| H151 |
C15 |
N13 |
H152 |
120.3 |
119.9 |
| H13 |
N13 |
C12 |
O14 |
171.2 |
180.0 |
| C12 |
N13 |
H13 |
C15 |
180.0 |
180.0 |
| H13 |
N13 |
C15 |
C16 |
103.2 |
360.0 |
| H13 |
N13 |
C15 |
H151 |
343.5 |
239.9 |
| H13 |
N13 |
C15 |
H152 |
223.2 |
120.0 |
| C16 |
C15 |
N13 |
H13 |
103.2 |
360.0 |
| N13 |
C15 |
C16 |
H151 |
240.3 |
240.0 |
| N13 |
C15 |
C16 |
H152 |
120.0 |
120.0 |
| H151 |
C15 |
C16 |
H152 |
239.7 |
240.0 |
| O17 |
C16 |
C15 |
H161 |
119.9 |
119.9 |
| O17 |
C16 |
C15 |
H162 |
240.0 |
240.0 |
| C15 |
C16 |
O17 |
P18 |
276.5 |
180.0 |
| H161 |
C16 |
C15 |
H162 |
120.1 |
120.0 |
| H151 |
C15 |
N13 |
H13 |
343.5 |
239.9 |
| N13 |
C15 |
H151 |
C16 |
120.5 |
120.0 |
| N13 |
C15 |
H151 |
H152 |
240.2 |
240.1 |
| C16 |
C15 |
H151 |
H152 |
119.8 |
120.0 |
| H151 |
C15 |
C16 |
O17 |
45.1 |
185.0 |
| H151 |
C15 |
C16 |
H161 |
285.3 |
65.0 |
| H151 |
C15 |
C16 |
H162 |
165.1 |
305.0 |
| H152 |
C15 |
N13 |
H13 |
223.2 |
120.0 |
| N13 |
C15 |
H152 |
C16 |
239.3 |
239.9 |
| N13 |
C15 |
H152 |
H151 |
119.7 |
119.9 |
| C16 |
C15 |
H152 |
H151 |
240.3 |
240.0 |
| H152 |
C15 |
C16 |
O17 |
165.4 |
304.9 |
| H152 |
C15 |
C16 |
H161 |
45.6 |
185.0 |
| H152 |
C15 |
C16 |
H162 |
285.4 |
65.0 |
| O17 |
C16 |
C15 |
H151 |
45.1 |
185.0 |
| O17 |
C16 |
C15 |
H152 |
165.4 |
304.9 |
| C15 |
C16 |
O17 |
H161 |
240.1 |
240.0 |
| C15 |
C16 |
O17 |
H162 |
120.0 |
120.0 |
| H161 |
C16 |
O17 |
H162 |
239.9 |
240.0 |
| C16 |
O17 |
P18 |
O19 |
197.8 |
185.0 |
| C16 |
O17 |
P18 |
O20 |
81.3 |
305.0 |
| C16 |
O17 |
P18 |
O21 |
320.0 |
65.0 |
| H161 |
C16 |
C15 |
H151 |
285.3 |
65.0 |
| H161 |
C16 |
C15 |
H152 |
45.6 |
185.0 |
| C15 |
C16 |
H161 |
O17 |
120.1 |
120.0 |
| C15 |
C16 |
H161 |
H162 |
240.0 |
240.0 |
| O17 |
C16 |
H161 |
H162 |
119.9 |
120.0 |
| H161 |
C16 |
O17 |
P18 |
36.4 |
300.0 |
| H162 |
C16 |
C15 |
H151 |
165.1 |
305.0 |
| H162 |
C16 |
C15 |
H152 |
285.4 |
65.0 |
| C15 |
C16 |
H162 |
O17 |
239.8 |
240.0 |
| C15 |
C16 |
H162 |
H161 |
119.9 |
120.0 |
| O17 |
C16 |
H162 |
H161 |
240.1 |
240.0 |
| H162 |
C16 |
O17 |
P18 |
156.5 |
60.0 |
| P18 |
O17 |
C16 |
H161 |
36.4 |
300.0 |
| P18 |
O17 |
C16 |
H162 |
156.5 |
60.0 |
| O19 |
P18 |
O17 |
O20 |
116.5 |
240.0 |
| O19 |
P18 |
O17 |
O21 |
237.8 |
120.0 |
| O17 |
P18 |
O19 |
H19 |
179.3 |
180.0 |
| O20 |
P18 |
O17 |
O21 |
121.3 |
240.0 |
| O17 |
P18 |
O21 |
H21 |
42.7 |
60.0 |
| O17 |
P18 |
O19 |
O20 |
246.9 |
120.0 |
| O17 |
P18 |
O19 |
O21 |
129.4 |
240.0 |
| O20 |
P18 |
O19 |
O21 |
242.5 |
120.0 |
| O19 |
P18 |
O21 |
H21 |
165.4 |
300.0 |
| O17 |
P18 |
O20 |
O19 |
115.5 |
240.0 |
| O17 |
P18 |
O20 |
O21 |
232.0 |
120.0 |
| O19 |
P18 |
O20 |
O21 |
116.6 |
240.0 |
| O20 |
P18 |
O19 |
H19 |
292.3 |
60.0 |
| O20 |
P18 |
O21 |
H21 |
283.5 |
180.0 |
| O17 |
P18 |
O21 |
O19 |
237.3 |
120.0 |
| O17 |
P18 |
O21 |
O20 |
119.1 |
240.0 |
| O19 |
P18 |
O21 |
O20 |
241.9 |
120.0 |
| O21 |
P18 |
O19 |
H19 |
49.9 |
300.0 |
| H19 |
O19 |
P18 |
O20 |
292.3 |
60.0 |
| H19 |
O19 |
P18 |
O21 |
49.9 |
300.0 |