PDB Chemical Component F6B
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for F6B
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C01 |
C02 |
1.398 |
1.380 |
C01 |
C06 |
1.398 |
1.396 |
C01 |
H01C |
1.080 |
1.080 |
C02 |
C03 |
1.421 |
1.384 |
C02 |
H02C |
1.080 |
1.079 |
C03 |
C04 |
1.401 |
1.383 |
C03 |
S11 |
1.796 |
1.762 |
C04 |
C05 |
1.389 |
1.381 |
C04 |
H04C |
1.080 |
1.080 |
C05 |
C06 |
1.376 |
1.395 |
C05 |
H05C |
1.080 |
1.080 |
C06 |
C07 |
1.531 |
1.479 |
C07 |
O08 |
1.224 |
1.215 |
C07 |
N09 |
1.432 |
1.348 |
N09 |
C10 |
1.455 |
1.465 |
N09 |
H09N |
1.000 |
0.970 |
C10 |
C15 |
1.404 |
1.507 |
C10 |
H101 |
1.100 |
1.090 |
C10 |
H102 |
1.101 |
1.091 |
S11 |
NP2 |
1.657 |
1.656 |
S11 |
O13 |
1.454 |
1.422 |
S11 |
O14 |
1.454 |
1.421 |
NP2 |
HNP1 |
1.000 |
0.970 |
NP2 |
HNP2 |
1.000 |
0.970 |
C15 |
C16 |
1.430 |
1.384 |
C15 |
C20 |
1.452 |
1.384 |
C16 |
C17 |
1.438 |
1.385 |
C16 |
F21 |
1.340 |
1.351 |
C17 |
C18 |
1.448 |
1.383 |
C17 |
H17C |
1.080 |
1.080 |
C18 |
C19 |
1.439 |
1.381 |
C18 |
H18C |
1.080 |
1.080 |
C19 |
C20 |
1.408 |
1.384 |
C19 |
H19C |
1.080 |
1.080 |
C20 |
F22 |
1.341 |
1.352 |
Bond Angles for F6B
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C02 |
C01 |
C06 |
122.3 |
119.8 |
C02 |
C01 |
H01C |
118.9 |
120.1 |
C01 |
C02 |
C03 |
119.1 |
120.1 |
C01 |
C02 |
H02C |
120.5 |
120.0 |
C06 |
C01 |
H01C |
118.9 |
120.1 |
C01 |
C06 |
C05 |
118.0 |
119.8 |
C01 |
C06 |
C07 |
122.0 |
120.1 |
C03 |
C02 |
H02C |
120.5 |
119.9 |
C02 |
C03 |
C04 |
117.9 |
120.3 |
C02 |
C03 |
S11 |
119.0 |
119.8 |
C04 |
C03 |
S11 |
123.1 |
119.8 |
C03 |
C04 |
C05 |
121.5 |
120.1 |
C03 |
C04 |
H04C |
119.3 |
120.0 |
C03 |
S11 |
NP2 |
110.3 |
107.2 |
C03 |
S11 |
O13 |
101.3 |
106.4 |
C03 |
S11 |
O14 |
103.5 |
106.4 |
C05 |
C04 |
H04C |
119.2 |
119.9 |
C04 |
C05 |
C06 |
121.3 |
119.8 |
C04 |
C05 |
H05C |
119.4 |
120.0 |
C06 |
C05 |
H05C |
119.3 |
120.1 |
C05 |
C06 |
C07 |
120.0 |
120.1 |
C06 |
C07 |
O08 |
114.8 |
120.0 |
C06 |
C07 |
N09 |
127.6 |
120.0 |
O08 |
C07 |
N09 |
117.5 |
120.0 |
C07 |
N09 |
C10 |
114.4 |
120.0 |
C07 |
N09 |
H09N |
122.8 |
120.0 |
C10 |
N09 |
H09N |
122.8 |
120.0 |
N09 |
C10 |
C15 |
121.2 |
109.5 |
N09 |
C10 |
H101 |
106.5 |
109.5 |
N09 |
C10 |
H102 |
106.5 |
109.4 |
C15 |
C10 |
H101 |
106.5 |
109.5 |
C15 |
C10 |
H102 |
106.5 |
109.5 |
C10 |
C15 |
C16 |
118.8 |
120.0 |
C10 |
C15 |
C20 |
119.3 |
120.0 |
H101 |
C10 |
H102 |
109.5 |
109.5 |
NP2 |
S11 |
O13 |
117.8 |
106.4 |
NP2 |
S11 |
O14 |
113.4 |
106.4 |
S11 |
NP2 |
HNP1 |
109.5 |
120.0 |
S11 |
NP2 |
HNP2 |
109.4 |
120.0 |
O13 |
S11 |
O14 |
108.9 |
123.2 |
HNP1 |
NP2 |
HNP2 |
109.5 |
120.0 |
C16 |
C15 |
C20 |
121.9 |
120.0 |
C15 |
C16 |
C17 |
118.1 |
120.0 |
C15 |
C16 |
F21 |
121.3 |
120.1 |
C15 |
C20 |
C19 |
119.8 |
120.0 |
C15 |
C20 |
F22 |
121.7 |
120.0 |
C17 |
C16 |
F21 |
120.7 |
120.0 |
C16 |
C17 |
C18 |
119.9 |
120.0 |
C16 |
C17 |
H17C |
120.0 |
120.1 |
C18 |
C17 |
H17C |
120.0 |
119.9 |
C17 |
C18 |
C19 |
121.0 |
120.1 |
C17 |
C18 |
H18C |
119.5 |
119.9 |
C19 |
C18 |
H18C |
119.5 |
120.0 |
C18 |
C19 |
C20 |
119.3 |
120.1 |
C18 |
C19 |
H19C |
120.3 |
120.0 |
C20 |
C19 |
H19C |
120.3 |
120.0 |
C19 |
C20 |
F22 |
118.5 |
120.0 |
Torsion Angles for F6B
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C06 |
C01 |
C02 |
H01C |
180.0 |
180.3 |
C02 |
C01 |
C06 |
C05 |
0.0 |
359.9 |
C02 |
C01 |
C06 |
C07 |
180.5 |
179.9 |
C03 |
C02 |
C01 |
H02C |
180.0 |
180.0 |
C01 |
C02 |
C03 |
C04 |
359.4 |
0.0 |
C01 |
C02 |
C03 |
S11 |
179.3 |
180.0 |
C02 |
C01 |
C06 |
H01C |
180.0 |
179.7 |
C06 |
C01 |
C02 |
C03 |
0.6 |
0.0 |
C06 |
C01 |
C02 |
H02C |
180.6 |
180.0 |
C04 |
C05 |
C06 |
C01 |
359.4 |
0.1 |
C01 |
C06 |
C05 |
H05C |
179.4 |
180.0 |
C05 |
C06 |
C01 |
C07 |
179.5 |
180.0 |
C01 |
C06 |
C07 |
O08 |
179.6 |
0.0 |
C01 |
C06 |
C07 |
N09 |
0.5 |
179.9 |
C02 |
C01 |
H01C |
C06 |
180.0 |
180.3 |
H01C |
C01 |
C02 |
C03 |
180.6 |
179.7 |
H01C |
C01 |
C02 |
H02C |
0.6 |
359.7 |
H01C |
C01 |
C06 |
C05 |
180.0 |
180.3 |
H01C |
C01 |
C06 |
C07 |
0.5 |
0.3 |
C03 |
C02 |
C01 |
C06 |
0.6 |
0.0 |
C03 |
C02 |
C01 |
H01C |
180.6 |
179.7 |
C01 |
C02 |
C03 |
H02C |
180.0 |
180.0 |
C04 |
C03 |
C02 |
S11 |
180.1 |
180.1 |
C02 |
C03 |
C04 |
C05 |
0.1 |
360.0 |
C02 |
C03 |
C04 |
H04C |
180.1 |
180.0 |
C02 |
C03 |
S11 |
NP2 |
309.7 |
90.0 |
C02 |
C03 |
S11 |
O13 |
184.2 |
203.5 |
C02 |
C03 |
S11 |
O14 |
71.3 |
336.5 |
H02C |
C02 |
C01 |
C06 |
180.6 |
180.0 |
H02C |
C02 |
C01 |
H01C |
0.6 |
359.7 |
C01 |
C02 |
H02C |
C03 |
180.0 |
180.0 |
H02C |
C02 |
C03 |
C04 |
179.4 |
180.0 |
H02C |
C02 |
C03 |
S11 |
359.3 |
360.0 |
C04 |
C03 |
C02 |
H02C |
179.4 |
180.0 |
C02 |
C03 |
C04 |
S11 |
179.9 |
179.9 |
C04 |
C03 |
S11 |
NP2 |
129.6 |
269.9 |
C04 |
C03 |
S11 |
O13 |
4.0 |
23.5 |
C04 |
C03 |
S11 |
O14 |
251.2 |
156.4 |
C05 |
C04 |
C03 |
H04C |
180.0 |
180.0 |
C03 |
C04 |
C05 |
C06 |
0.5 |
359.9 |
C03 |
C04 |
C05 |
H05C |
180.5 |
180.0 |
S11 |
C03 |
C02 |
H02C |
359.3 |
360.0 |
C02 |
C03 |
S11 |
C04 |
180.1 |
180.1 |
S11 |
C03 |
C04 |
C05 |
180.2 |
180.1 |
S11 |
C03 |
C04 |
H04C |
0.2 |
0.1 |
NP2 |
S11 |
C03 |
O13 |
125.5 |
246.5 |
NP2 |
S11 |
C03 |
O14 |
238.4 |
113.6 |
C03 |
S11 |
NP2 |
HNP1 |
180.0 |
149.9 |
C03 |
S11 |
NP2 |
HNP2 |
300.0 |
330.0 |
O13 |
S11 |
C03 |
O14 |
112.9 |
227.1 |
C01 |
C06 |
C05 |
C04 |
359.4 |
0.1 |
C05 |
C04 |
C03 |
S11 |
180.2 |
180.1 |
C03 |
C04 |
C05 |
H04C |
180.0 |
180.0 |
C06 |
C05 |
C04 |
H05C |
180.0 |
179.9 |
C04 |
C05 |
C06 |
C07 |
178.9 |
180.1 |
H04C |
C04 |
C03 |
S11 |
0.2 |
0.1 |
C03 |
C04 |
H04C |
C05 |
180.0 |
180.0 |
H04C |
C04 |
C05 |
C06 |
180.5 |
180.0 |
H04C |
C04 |
C05 |
H05C |
0.5 |
0.0 |
C05 |
C06 |
C01 |
H01C |
180.0 |
180.3 |
C01 |
C06 |
C05 |
C07 |
180.5 |
180.0 |
C06 |
C05 |
C04 |
H04C |
180.5 |
180.0 |
C04 |
C05 |
C06 |
H05C |
180.0 |
180.1 |
C05 |
C06 |
C07 |
O08 |
0.1 |
180.1 |
C05 |
C06 |
C07 |
N09 |
181.0 |
360.0 |
H05C |
C05 |
C04 |
H04C |
0.5 |
0.0 |
C04 |
C05 |
H05C |
C06 |
180.0 |
179.9 |
H05C |
C05 |
C06 |
C07 |
358.9 |
0.0 |
C07 |
C06 |
C01 |
H01C |
0.5 |
0.3 |
C01 |
C06 |
C07 |
C05 |
179.5 |
180.0 |
C07 |
C06 |
C05 |
H05C |
358.9 |
0.0 |
O08 |
C07 |
C06 |
N09 |
179.1 |
180.1 |
C06 |
C07 |
N09 |
C10 |
206.2 |
180.0 |
C06 |
C07 |
N09 |
H09N |
26.2 |
0.1 |
C06 |
C07 |
O08 |
N09 |
180.8 |
179.9 |
O08 |
C07 |
N09 |
C10 |
27.1 |
359.9 |
O08 |
C07 |
N09 |
H09N |
207.1 |
180.0 |
C06 |
C07 |
N09 |
O08 |
179.1 |
180.1 |
C10 |
N09 |
C07 |
H09N |
180.0 |
179.9 |
C07 |
N09 |
C10 |
C15 |
121.2 |
180.0 |
C07 |
N09 |
C10 |
H101 |
242.9 |
300.1 |
C07 |
N09 |
C10 |
H102 |
359.6 |
60.1 |
C07 |
N09 |
C10 |
H09N |
180.0 |
180.1 |
C15 |
C10 |
N09 |
H101 |
238.4 |
239.9 |
C15 |
C10 |
N09 |
H102 |
121.6 |
120.0 |
N09 |
C10 |
C15 |
C16 |
89.2 |
90.0 |
N09 |
C10 |
C15 |
C20 |
269.2 |
269.8 |
H101 |
C10 |
N09 |
H102 |
243.3 |
240.0 |
C07 |
N09 |
H09N |
C10 |
180.0 |
179.9 |
H09N |
N09 |
C10 |
C15 |
301.2 |
359.9 |
H09N |
N09 |
C10 |
H101 |
62.8 |
120.0 |
H09N |
N09 |
C10 |
H102 |
179.6 |
240.0 |
C15 |
C10 |
N09 |
H09N |
301.2 |
359.9 |
N09 |
C10 |
C15 |
H101 |
121.6 |
120.0 |
N09 |
C10 |
C15 |
H102 |
238.4 |
240.1 |
H101 |
C10 |
C15 |
H102 |
116.7 |
120.0 |
C16 |
C15 |
C10 |
C20 |
180.0 |
180.3 |
C10 |
C15 |
C16 |
C17 |
179.9 |
180.0 |
C10 |
C15 |
C16 |
F21 |
359.9 |
360.0 |
C10 |
C15 |
C20 |
C19 |
180.2 |
179.7 |
C10 |
C15 |
C20 |
F22 |
0.0 |
360.0 |
H101 |
C10 |
N09 |
H09N |
62.8 |
120.0 |
N09 |
C10 |
H101 |
C15 |
229.4 |
240.0 |
N09 |
C10 |
H101 |
H102 |
114.7 |
120.0 |
C15 |
C10 |
H101 |
H102 |
245.3 |
240.0 |
H101 |
C10 |
C15 |
C16 |
327.6 |
330.0 |
H101 |
C10 |
C15 |
C20 |
147.6 |
149.7 |
H102 |
C10 |
N09 |
H09N |
179.6 |
240.0 |
N09 |
C10 |
H102 |
C15 |
130.6 |
120.0 |
N09 |
C10 |
H102 |
H101 |
245.3 |
240.0 |
C15 |
C10 |
H102 |
H101 |
114.7 |
120.0 |
H102 |
C10 |
C15 |
C16 |
210.9 |
210.0 |
H102 |
C10 |
C15 |
C20 |
30.8 |
29.7 |
C03 |
S11 |
NP2 |
O13 |
244.4 |
113.5 |
C03 |
S11 |
NP2 |
O14 |
115.5 |
246.4 |
O13 |
S11 |
NP2 |
O14 |
231.1 |
132.9 |
HNP1 |
NP2 |
S11 |
HNP2 |
240.0 |
179.9 |
C03 |
S11 |
O13 |
NP2 |
120.3 |
245.9 |
C03 |
S11 |
O13 |
O14 |
251.3 |
123.0 |
NP2 |
S11 |
O13 |
O14 |
131.0 |
237.0 |
O13 |
S11 |
NP2 |
HNP1 |
295.6 |
36.4 |
O13 |
S11 |
NP2 |
HNP2 |
55.6 |
216.5 |
C03 |
S11 |
O14 |
NP2 |
240.5 |
114.1 |
C03 |
S11 |
O14 |
O13 |
107.2 |
237.1 |
NP2 |
S11 |
O14 |
O13 |
226.7 |
123.0 |
O14 |
S11 |
NP2 |
HNP1 |
64.5 |
263.5 |
O14 |
S11 |
NP2 |
HNP2 |
184.5 |
83.6 |
HNP1 |
NP2 |
S11 |
O13 |
295.6 |
36.4 |
HNP1 |
NP2 |
S11 |
O14 |
64.5 |
263.5 |
S11 |
NP2 |
HNP1 |
HNP2 |
120.0 |
180.1 |
HNP2 |
NP2 |
S11 |
O13 |
55.6 |
216.5 |
HNP2 |
NP2 |
S11 |
O14 |
184.5 |
83.6 |
S11 |
NP2 |
HNP2 |
HNP1 |
240.0 |
179.9 |
C16 |
C15 |
C10 |
H101 |
327.6 |
330.0 |
C16 |
C15 |
C10 |
H102 |
210.9 |
210.0 |
C10 |
C15 |
C16 |
C20 |
180.0 |
179.7 |
C16 |
C15 |
C20 |
C19 |
0.2 |
359.5 |
C16 |
C15 |
C20 |
F22 |
180.0 |
179.7 |
C17 |
C16 |
C15 |
F21 |
180.0 |
180.0 |
C15 |
C16 |
C17 |
C18 |
360.0 |
0.0 |
C15 |
C16 |
C17 |
H17C |
180.0 |
180.0 |
C20 |
C15 |
C10 |
H101 |
147.6 |
149.7 |
C20 |
C15 |
C10 |
H102 |
30.8 |
29.7 |
C10 |
C15 |
C20 |
C16 |
180.0 |
180.3 |
C20 |
C15 |
C16 |
C17 |
359.9 |
0.3 |
C20 |
C15 |
C16 |
F21 |
179.9 |
180.2 |
C18 |
C19 |
C20 |
C15 |
359.8 |
0.5 |
C15 |
C20 |
C19 |
H19C |
179.8 |
180.3 |
C19 |
C20 |
C15 |
F22 |
180.2 |
179.7 |
C17 |
C16 |
C15 |
C20 |
359.9 |
0.3 |
C15 |
C16 |
C17 |
F21 |
180.0 |
180.0 |
C18 |
C17 |
C16 |
H17C |
180.0 |
180.0 |
C16 |
C17 |
C18 |
C19 |
0.1 |
360.0 |
C16 |
C17 |
C18 |
H18C |
180.1 |
180.0 |
F21 |
C16 |
C15 |
C20 |
179.9 |
180.2 |
C15 |
C16 |
F21 |
C17 |
180.0 |
180.0 |
F21 |
C16 |
C17 |
C18 |
180.0 |
180.1 |
F21 |
C16 |
C17 |
H17C |
360.0 |
0.1 |
C18 |
C17 |
C16 |
F21 |
180.0 |
180.1 |
C16 |
C17 |
C18 |
H17C |
180.0 |
180.0 |
C19 |
C18 |
C17 |
H18C |
180.0 |
180.0 |
C17 |
C18 |
C19 |
C20 |
0.1 |
359.7 |
C17 |
C18 |
C19 |
H19C |
180.0 |
180.0 |
H17C |
C17 |
C16 |
F21 |
360.0 |
0.1 |
C16 |
C17 |
H17C |
C18 |
180.0 |
180.0 |
H17C |
C17 |
C18 |
C19 |
180.0 |
180.0 |
H17C |
C17 |
C18 |
H18C |
0.0 |
360.0 |
C15 |
C20 |
C19 |
C18 |
359.8 |
0.5 |
C19 |
C18 |
C17 |
H17C |
180.0 |
180.0 |
C17 |
C18 |
C19 |
H18C |
180.0 |
180.0 |
C20 |
C19 |
C18 |
H19C |
180.0 |
179.7 |
C18 |
C19 |
C20 |
F22 |
180.0 |
180.3 |
H18C |
C18 |
C17 |
H17C |
0.0 |
360.0 |
C17 |
C18 |
H18C |
C19 |
180.0 |
180.0 |
H18C |
C18 |
C19 |
C20 |
180.1 |
179.8 |
H18C |
C18 |
C19 |
H19C |
0.0 |
0.0 |
C15 |
C20 |
C19 |
F22 |
179.8 |
180.3 |
C20 |
C19 |
C18 |
H18C |
180.1 |
179.8 |
C18 |
C19 |
C20 |
H19C |
180.0 |
180.3 |
H19C |
C19 |
C18 |
H18C |
0.0 |
0.0 |
C18 |
C19 |
H19C |
C20 |
180.0 |
179.7 |
H19C |
C19 |
C20 |
F22 |
360.0 |
0.0 |
C15 |
C20 |
F22 |
C19 |
180.2 |
179.7 |
F22 |
C20 |
C19 |
H19C |
360.0 |
0.0 |