PDB Chemical Component F6A
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for F6A
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N |
C8 |
1.333 |
1.348 |
N |
C9 |
1.354 |
1.398 |
O |
C8 |
1.221 |
1.216 |
C1 |
F1 |
1.320 |
1.399 |
C1 |
C2 |
1.500 |
1.507 |
C1 |
F2 |
1.319 |
1.398 |
C1 |
F3 |
1.321 |
1.400 |
C2 |
C3 |
1.493 |
1.396 |
C2 |
C7 |
1.392 |
1.380 |
C3 |
C4 |
1.391 |
1.396 |
C3 |
C8 |
1.501 |
1.479 |
C4 |
C5 |
1.392 |
1.379 |
C5 |
C6 |
1.396 |
1.384 |
C6 |
C7 |
1.391 |
1.383 |
C9 |
C10 |
1.393 |
1.387 |
C9 |
C14 |
1.397 |
1.390 |
C10 |
C11 |
1.393 |
1.393 |
C11 |
C12 |
1.396 |
1.394 |
C11 |
C15 |
1.493 |
1.484 |
C12 |
C13 |
1.393 |
1.382 |
C13 |
C14 |
1.394 |
1.383 |
C15 |
C16 |
1.404 |
1.394 |
C15 |
C20 |
1.400 |
1.394 |
C16 |
C17 |
1.396 |
1.380 |
C17 |
C18 |
1.399 |
1.383 |
C18 |
C19 |
1.398 |
1.383 |
C19 |
C20 |
1.399 |
1.380 |
N |
HN |
1.000 |
0.970 |
C4 |
H4 |
1.080 |
1.080 |
C5 |
H5 |
1.080 |
1.080 |
C6 |
H6 |
1.080 |
1.080 |
C7 |
H7 |
1.080 |
1.080 |
C10 |
H10 |
1.080 |
1.079 |
C12 |
H12 |
1.080 |
1.079 |
C13 |
H13 |
1.080 |
1.079 |
C14 |
H14 |
1.080 |
1.080 |
C16 |
H16 |
1.080 |
1.079 |
C17 |
H17 |
1.080 |
1.081 |
C18 |
H18 |
1.080 |
1.080 |
C19 |
H19 |
1.080 |
1.080 |
C20 |
H20 |
1.080 |
1.079 |
Bond Angles for F6A
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C8 |
N |
C9 |
125.7 |
120.0 |
N |
C8 |
O |
123.1 |
120.0 |
N |
C8 |
C3 |
116.7 |
120.0 |
C8 |
N |
HN |
117.2 |
120.0 |
N |
C9 |
C10 |
117.5 |
120.0 |
N |
C9 |
C14 |
122.9 |
120.0 |
C9 |
N |
HN |
117.1 |
120.0 |
O |
C8 |
C3 |
120.1 |
120.0 |
F1 |
C1 |
C2 |
111.4 |
109.4 |
F1 |
C1 |
F2 |
109.9 |
109.5 |
F1 |
C1 |
F3 |
108.0 |
109.4 |
C2 |
C1 |
F2 |
107.2 |
109.5 |
C2 |
C1 |
F3 |
109.9 |
109.4 |
C1 |
C2 |
C3 |
122.4 |
120.1 |
C1 |
C2 |
C7 |
118.6 |
120.1 |
F2 |
C1 |
F3 |
110.6 |
109.5 |
C3 |
C2 |
C7 |
119.1 |
119.8 |
C2 |
C3 |
C4 |
118.6 |
119.7 |
C2 |
C3 |
C8 |
122.5 |
120.1 |
C2 |
C7 |
C6 |
120.0 |
120.1 |
C2 |
C7 |
H7 |
120.0 |
119.9 |
C4 |
C3 |
C8 |
118.9 |
120.2 |
C3 |
C4 |
C5 |
120.1 |
119.8 |
C3 |
C4 |
H4 |
119.9 |
120.1 |
C4 |
C5 |
C6 |
121.3 |
120.2 |
C5 |
C4 |
H4 |
120.0 |
120.1 |
C4 |
C5 |
H5 |
119.3 |
119.9 |
C5 |
C6 |
C7 |
120.9 |
120.3 |
C6 |
C5 |
H5 |
119.3 |
119.9 |
C5 |
C6 |
H6 |
119.5 |
119.9 |
C7 |
C6 |
H6 |
119.6 |
119.8 |
C6 |
C7 |
H7 |
120.0 |
120.0 |
C10 |
C9 |
C14 |
119.6 |
120.0 |
C9 |
C10 |
C11 |
120.6 |
119.8 |
C9 |
C10 |
H10 |
119.7 |
120.1 |
C9 |
C14 |
C13 |
120.1 |
120.2 |
C9 |
C14 |
H14 |
119.9 |
120.0 |
C10 |
C11 |
C12 |
119.5 |
119.8 |
C10 |
C11 |
C15 |
118.9 |
120.1 |
C11 |
C10 |
H10 |
119.7 |
120.1 |
C12 |
C11 |
C15 |
121.6 |
120.1 |
C11 |
C12 |
C13 |
120.3 |
120.0 |
C11 |
C12 |
H12 |
119.9 |
120.0 |
C11 |
C15 |
C16 |
120.2 |
120.1 |
C11 |
C15 |
C20 |
120.3 |
120.1 |
C12 |
C13 |
C14 |
119.9 |
120.2 |
C13 |
C12 |
H12 |
119.8 |
120.0 |
C12 |
C13 |
H13 |
120.1 |
119.9 |
C14 |
C13 |
H13 |
120.0 |
119.9 |
C13 |
C14 |
H14 |
119.9 |
119.8 |
C16 |
C15 |
C20 |
119.5 |
119.8 |
C15 |
C16 |
C17 |
120.5 |
119.8 |
C15 |
C16 |
H16 |
119.8 |
120.1 |
C15 |
C20 |
C19 |
120.1 |
119.9 |
C15 |
C20 |
H20 |
120.0 |
120.0 |
C16 |
C17 |
C18 |
119.7 |
120.2 |
C17 |
C16 |
H16 |
119.8 |
120.1 |
C16 |
C17 |
H17 |
120.2 |
119.9 |
C17 |
C18 |
C19 |
120.2 |
120.2 |
C18 |
C17 |
H17 |
120.2 |
119.9 |
C17 |
C18 |
H18 |
119.9 |
119.9 |
C18 |
C19 |
C20 |
120.0 |
120.1 |
C19 |
C18 |
H18 |
119.9 |
119.9 |
C18 |
C19 |
H19 |
120.0 |
119.9 |
C20 |
C19 |
H19 |
120.0 |
119.9 |
C19 |
C20 |
H20 |
119.9 |
120.1 |
Torsion Angles for F6A
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C8 |
N |
C9 |
C10 |
169.7 |
146.7 |
C8 |
N |
C9 |
C14 |
349.3 |
326.5 |
C9 |
N |
C8 |
HN |
180.0 |
180.2 |
O |
C8 |
N |
C3 |
178.2 |
180.0 |
C2 |
C3 |
C8 |
N |
125.4 |
180.0 |
C4 |
C3 |
C8 |
N |
306.8 |
359.9 |
C9 |
N |
C8 |
O |
323.3 |
354.7 |
C9 |
N |
C8 |
C3 |
145.1 |
174.7 |
C8 |
N |
C9 |
HN |
180.0 |
179.8 |
C10 |
C9 |
N |
C14 |
180.4 |
180.2 |
N |
C9 |
C10 |
C11 |
180.2 |
180.0 |
N |
C9 |
C10 |
H10 |
0.2 |
0.0 |
N |
C9 |
C14 |
C13 |
180.2 |
179.7 |
N |
C9 |
C14 |
H14 |
0.2 |
359.9 |
O |
C8 |
N |
C9 |
323.3 |
354.7 |
N |
C8 |
O |
C3 |
181.8 |
180.0 |
O |
C8 |
N |
HN |
143.3 |
174.5 |
C2 |
C3 |
C8 |
O |
307.1 |
0.0 |
C4 |
C3 |
C8 |
O |
128.5 |
179.9 |
C2 |
C1 |
F1 |
F2 |
118.6 |
240.0 |
C2 |
C1 |
F1 |
F3 |
239.3 |
119.9 |
F1 |
C1 |
C2 |
C3 |
327.3 |
180.0 |
F1 |
C1 |
C2 |
C7 |
148.1 |
359.8 |
F2 |
C1 |
F1 |
F3 |
120.7 |
240.0 |
F1 |
C1 |
C2 |
F2 |
239.8 |
120.0 |
F1 |
C1 |
C2 |
F3 |
119.6 |
240.1 |
F2 |
C1 |
C2 |
F3 |
239.8 |
120.0 |
C3 |
C2 |
C1 |
C7 |
179.3 |
180.3 |
C1 |
C2 |
C3 |
C4 |
179.8 |
180.0 |
C1 |
C2 |
C3 |
C8 |
1.3 |
360.0 |
C1 |
C2 |
C7 |
C6 |
179.8 |
179.7 |
C1 |
C2 |
C7 |
H7 |
359.8 |
0.0 |
F1 |
C1 |
F2 |
C2 |
121.1 |
240.0 |
F1 |
C1 |
F2 |
F3 |
240.9 |
120.0 |
C2 |
C1 |
F2 |
F3 |
119.8 |
240.0 |
F2 |
C1 |
C2 |
C3 |
87.6 |
60.0 |
F2 |
C1 |
C2 |
C7 |
268.3 |
239.7 |
F1 |
C1 |
F3 |
C2 |
238.3 |
119.9 |
F1 |
C1 |
F3 |
F2 |
120.2 |
240.0 |
C2 |
C1 |
F3 |
F2 |
241.9 |
120.0 |
F3 |
C1 |
C2 |
C3 |
207.7 |
299.9 |
F3 |
C1 |
C2 |
C7 |
28.5 |
119.7 |
N |
C8 |
C3 |
C2 |
125.4 |
180.0 |
O |
C8 |
C3 |
C2 |
307.1 |
0.0 |
C3 |
C2 |
C1 |
F2 |
87.6 |
60.0 |
C3 |
C2 |
C1 |
F3 |
207.7 |
299.9 |
C1 |
C2 |
C3 |
C7 |
180.7 |
179.7 |
C3 |
C2 |
C7 |
C6 |
0.5 |
359.5 |
C3 |
C2 |
C7 |
H7 |
180.5 |
179.7 |
C4 |
C3 |
C2 |
C8 |
178.6 |
180.1 |
C2 |
C3 |
C4 |
C5 |
0.6 |
359.9 |
C2 |
C3 |
C4 |
H4 |
180.7 |
180.0 |
C7 |
C2 |
C1 |
F2 |
268.3 |
239.7 |
C7 |
C2 |
C1 |
F3 |
28.5 |
119.7 |
C1 |
C2 |
C7 |
C3 |
179.3 |
180.3 |
C7 |
C2 |
C3 |
C4 |
359.1 |
0.3 |
C7 |
C2 |
C3 |
C8 |
180.6 |
180.2 |
C5 |
C6 |
C7 |
C2 |
0.0 |
0.5 |
C2 |
C7 |
C6 |
H6 |
180.1 |
180.3 |
C6 |
C7 |
C2 |
H7 |
180.0 |
179.7 |
N |
C8 |
C3 |
C4 |
306.8 |
359.9 |
O |
C8 |
C3 |
C4 |
128.5 |
179.9 |
C4 |
C3 |
C2 |
C7 |
359.1 |
0.3 |
C2 |
C3 |
C4 |
C8 |
181.4 |
179.9 |
C3 |
C4 |
C5 |
C6 |
359.9 |
0.1 |
C5 |
C4 |
C3 |
H4 |
180.0 |
179.9 |
C3 |
C4 |
C5 |
H5 |
179.9 |
180.0 |
C3 |
C8 |
N |
C9 |
145.1 |
174.7 |
N |
C8 |
C3 |
O |
178.3 |
180.0 |
C3 |
C8 |
N |
HN |
325.1 |
354.5 |
C8 |
C3 |
C2 |
C7 |
180.6 |
180.2 |
C2 |
C3 |
C8 |
C4 |
178.6 |
180.1 |
C8 |
C3 |
C4 |
C5 |
179.3 |
180.0 |
C8 |
C3 |
C4 |
H4 |
359.3 |
0.1 |
C5 |
C4 |
C3 |
C8 |
179.3 |
180.0 |
C3 |
C4 |
C5 |
H4 |
180.0 |
180.1 |
C4 |
C5 |
C6 |
C7 |
359.7 |
359.7 |
C6 |
C5 |
C4 |
H5 |
180.0 |
180.1 |
C4 |
C5 |
C6 |
H6 |
179.7 |
179.9 |
C2 |
C7 |
C6 |
C5 |
0.0 |
0.5 |
C6 |
C5 |
C4 |
H4 |
179.9 |
180.0 |
C4 |
C5 |
C6 |
H5 |
180.0 |
179.9 |
C7 |
C6 |
C5 |
H6 |
180.0 |
179.8 |
C5 |
C6 |
C7 |
H7 |
180.0 |
180.3 |
C2 |
C7 |
C6 |
H7 |
180.0 |
180.3 |
C7 |
C6 |
C5 |
H5 |
179.8 |
179.8 |
C5 |
C6 |
C7 |
H6 |
180.0 |
180.2 |
N |
C9 |
C10 |
C14 |
179.6 |
179.8 |
C10 |
C9 |
N |
HN |
349.7 |
326.9 |
C10 |
C9 |
C14 |
C13 |
359.8 |
359.5 |
C10 |
C9 |
C14 |
H14 |
179.8 |
179.8 |
C9 |
C10 |
C11 |
C12 |
359.2 |
0.0 |
C9 |
C10 |
C11 |
C15 |
180.5 |
180.0 |
C11 |
C10 |
C9 |
H10 |
180.0 |
180.0 |
N |
C9 |
C14 |
C10 |
180.4 |
180.2 |
C14 |
C9 |
N |
HN |
169.3 |
146.7 |
C14 |
C9 |
C10 |
C11 |
0.6 |
0.2 |
C14 |
C9 |
C10 |
H10 |
180.6 |
180.2 |
C12 |
C13 |
C14 |
C9 |
0.1 |
0.5 |
C9 |
C14 |
C13 |
H13 |
180.0 |
180.3 |
C13 |
C14 |
C9 |
H14 |
180.0 |
179.8 |
C11 |
C10 |
C9 |
C14 |
0.6 |
0.2 |
C9 |
C10 |
C11 |
H10 |
180.0 |
180.0 |
C12 |
C11 |
C10 |
C15 |
178.6 |
180.0 |
C10 |
C11 |
C12 |
C13 |
0.7 |
0.0 |
C10 |
C11 |
C12 |
H12 |
180.7 |
180.0 |
C10 |
C11 |
C15 |
C16 |
136.7 |
180.0 |
C10 |
C11 |
C15 |
C20 |
317.9 |
359.7 |
C10 |
C11 |
C12 |
C15 |
181.4 |
180.0 |
C12 |
C11 |
C10 |
H10 |
179.2 |
180.0 |
C12 |
C11 |
C15 |
C16 |
318.1 |
0.0 |
C12 |
C11 |
C15 |
C20 |
139.3 |
179.7 |
C11 |
C12 |
C13 |
C14 |
359.7 |
359.7 |
C13 |
C12 |
C11 |
H12 |
180.0 |
180.0 |
C11 |
C12 |
C13 |
H13 |
179.7 |
180.0 |
C10 |
C11 |
C15 |
C12 |
178.6 |
180.0 |
C15 |
C11 |
C10 |
H10 |
0.5 |
0.0 |
C15 |
C11 |
C12 |
C13 |
179.3 |
180.0 |
C15 |
C11 |
C12 |
H12 |
359.3 |
360.0 |
C16 |
C15 |
C11 |
C20 |
178.8 |
180.3 |
C11 |
C15 |
C16 |
C17 |
180.8 |
179.9 |
C11 |
C15 |
C16 |
H16 |
0.8 |
359.9 |
C11 |
C15 |
C20 |
C19 |
179.1 |
179.8 |
C11 |
C15 |
C20 |
H20 |
359.1 |
0.0 |
C9 |
C14 |
C13 |
C12 |
0.1 |
0.5 |
C13 |
C12 |
C11 |
C15 |
179.3 |
180.0 |
C11 |
C12 |
C13 |
H12 |
180.0 |
180.0 |
C14 |
C13 |
C12 |
H13 |
180.0 |
179.7 |
C12 |
C13 |
C14 |
H14 |
180.0 |
180.3 |
C9 |
C14 |
C13 |
H14 |
180.0 |
180.2 |
C14 |
C13 |
C12 |
H12 |
179.7 |
179.7 |
C12 |
C13 |
C14 |
H13 |
180.0 |
180.3 |
C11 |
C15 |
C16 |
C20 |
181.2 |
179.7 |
C16 |
C15 |
C20 |
C19 |
0.3 |
359.5 |
C16 |
C15 |
C20 |
H20 |
180.3 |
179.7 |
C15 |
C16 |
C17 |
C18 |
0.3 |
0.0 |
C17 |
C16 |
C15 |
H16 |
180.0 |
180.0 |
C15 |
C16 |
C17 |
H17 |
180.3 |
180.0 |
C11 |
C15 |
C20 |
C16 |
178.8 |
180.3 |
C20 |
C15 |
C16 |
C17 |
359.6 |
0.2 |
C20 |
C15 |
C16 |
H16 |
179.6 |
180.3 |
C18 |
C19 |
C20 |
C15 |
359.9 |
0.5 |
C15 |
C20 |
C19 |
H19 |
179.9 |
180.3 |
C19 |
C20 |
C15 |
H20 |
180.0 |
179.8 |
C17 |
C16 |
C15 |
C20 |
359.6 |
0.2 |
C15 |
C16 |
C17 |
H16 |
180.0 |
180.0 |
C16 |
C17 |
C18 |
C19 |
359.9 |
360.0 |
C18 |
C17 |
C16 |
H17 |
180.0 |
180.0 |
C16 |
C17 |
C18 |
H18 |
179.9 |
179.9 |
C18 |
C17 |
C16 |
H16 |
180.3 |
180.0 |
C16 |
C17 |
C18 |
H17 |
180.0 |
180.0 |
C17 |
C18 |
C19 |
C20 |
0.0 |
359.7 |
C19 |
C18 |
C17 |
H18 |
180.0 |
180.1 |
C17 |
C18 |
C19 |
H19 |
180.0 |
179.9 |
C15 |
C20 |
C19 |
C18 |
359.9 |
0.5 |
C19 |
C18 |
C17 |
H17 |
179.9 |
180.0 |
C17 |
C18 |
C19 |
H18 |
180.0 |
179.9 |
C20 |
C19 |
C18 |
H19 |
180.0 |
179.8 |
C18 |
C19 |
C20 |
H20 |
179.9 |
180.3 |
C15 |
C20 |
C19 |
H20 |
180.0 |
180.2 |
C20 |
C19 |
C18 |
H18 |
180.0 |
179.8 |
C18 |
C19 |
C20 |
H19 |
180.0 |
180.2 |
C8 |
N |
HN |
C9 |
180.0 |
180.2 |
HN |
N |
C8 |
O |
143.3 |
174.5 |
HN |
N |
C8 |
C3 |
325.1 |
354.5 |
HN |
N |
C9 |
C10 |
349.7 |
326.9 |
HN |
N |
C9 |
C14 |
169.3 |
146.7 |
H4 |
C4 |
C3 |
C8 |
359.3 |
0.1 |
C3 |
C4 |
H4 |
C5 |
180.0 |
179.9 |
H4 |
C4 |
C5 |
C6 |
179.9 |
180.0 |
H4 |
C4 |
C5 |
H5 |
359.8 |
359.9 |
C4 |
C5 |
H5 |
C6 |
180.0 |
180.1 |
H5 |
C5 |
C4 |
H4 |
359.8 |
359.9 |
H5 |
C5 |
C6 |
C7 |
179.8 |
179.8 |
H5 |
C5 |
C6 |
H6 |
359.7 |
0.0 |
C5 |
C6 |
H6 |
C7 |
180.0 |
179.8 |
H6 |
C6 |
C5 |
H5 |
359.7 |
0.0 |
H6 |
C6 |
C7 |
H7 |
0.1 |
0.0 |
C2 |
C7 |
H7 |
C6 |
180.0 |
179.7 |
H7 |
C7 |
C6 |
H6 |
0.1 |
0.0 |
H10 |
C10 |
C9 |
C14 |
180.6 |
180.2 |
C9 |
C10 |
H10 |
C11 |
180.0 |
180.0 |
H10 |
C10 |
C11 |
C12 |
179.2 |
180.0 |
H10 |
C10 |
C11 |
C15 |
0.5 |
0.0 |
H12 |
C12 |
C11 |
C15 |
359.3 |
360.0 |
C11 |
C12 |
H12 |
C13 |
180.0 |
180.0 |
H12 |
C12 |
C13 |
C14 |
179.7 |
179.7 |
H12 |
C12 |
C13 |
H13 |
359.7 |
0.0 |
C12 |
C13 |
H13 |
C14 |
180.0 |
179.7 |
H13 |
C13 |
C12 |
H12 |
359.7 |
0.0 |
H13 |
C13 |
C14 |
H14 |
0.0 |
0.0 |
C9 |
C14 |
H14 |
C13 |
180.0 |
179.8 |
H14 |
C14 |
C13 |
H13 |
0.0 |
0.0 |
H16 |
C16 |
C15 |
C20 |
179.6 |
180.3 |
C15 |
C16 |
H16 |
C17 |
180.0 |
180.0 |
H16 |
C16 |
C17 |
C18 |
180.3 |
180.0 |
H16 |
C16 |
C17 |
H17 |
0.3 |
360.0 |
C16 |
C17 |
H17 |
C18 |
180.0 |
180.0 |
H17 |
C17 |
C16 |
H16 |
0.3 |
360.0 |
H17 |
C17 |
C18 |
C19 |
179.9 |
180.0 |
H17 |
C17 |
C18 |
H18 |
360.0 |
360.0 |
C17 |
C18 |
H18 |
C19 |
180.0 |
180.1 |
H18 |
C18 |
C17 |
H17 |
360.0 |
360.0 |
H18 |
C18 |
C19 |
C20 |
180.0 |
179.8 |
H18 |
C18 |
C19 |
H19 |
360.0 |
360.0 |
C18 |
C19 |
H19 |
C20 |
180.0 |
179.8 |
H19 |
C19 |
C18 |
H18 |
360.0 |
360.0 |
H19 |
C19 |
C20 |
H20 |
359.9 |
0.1 |
C15 |
C20 |
H20 |
C19 |
180.0 |
179.8 |
H20 |
C20 |
C19 |
H19 |
359.9 |
0.1 |