PDB Chemical Component F48
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for F48
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C13 |
C14 |
1.482 |
1.471 |
C13 |
C12 |
1.518 |
1.530 |
C14 |
N4 |
1.150 |
1.136 |
C10 |
C11 |
1.350 |
1.349 |
C10 |
C9 |
1.424 |
1.407 |
C12 |
C11 |
1.494 |
1.507 |
C11 |
O |
1.367 |
1.342 |
C9 |
C8 |
1.351 |
1.363 |
O |
C8 |
1.379 |
1.347 |
C8 |
C7 |
1.445 |
1.471 |
C19 |
C20 |
1.524 |
1.531 |
C19 |
C18 |
1.516 |
1.530 |
C20 |
C15 |
1.518 |
1.530 |
C7 |
N3 |
1.317 |
1.314 |
C7 |
N2 |
1.375 |
1.373 |
C18 |
C17 |
1.530 |
1.531 |
C15 |
N2 |
1.487 |
1.464 |
C15 |
C16 |
1.525 |
1.530 |
N3 |
C |
1.389 |
1.354 |
N2 |
C1 |
1.408 |
1.374 |
C17 |
C16 |
1.522 |
1.530 |
C |
C1 |
1.396 |
1.406 |
C |
C4 |
1.390 |
1.400 |
C1 |
C2 |
1.415 |
1.402 |
C4 |
N |
1.339 |
1.313 |
C2 |
C5 |
1.430 |
1.462 |
C2 |
C3 |
1.443 |
1.405 |
C5 |
C6 |
1.356 |
1.342 |
N |
C3 |
1.347 |
1.331 |
C3 |
N1 |
1.363 |
1.375 |
C6 |
N1 |
1.373 |
1.369 |
C4 |
H1 |
1.080 |
1.081 |
C5 |
H2 |
1.081 |
1.080 |
C6 |
H3 |
1.080 |
1.080 |
N1 |
H4 |
1.000 |
0.970 |
C9 |
H5 |
1.080 |
1.081 |
C10 |
H6 |
1.080 |
1.080 |
C12 |
H7 |
1.100 |
1.090 |
C12 |
H8 |
1.100 |
1.090 |
C13 |
H9 |
1.100 |
1.090 |
C13 |
H10 |
1.100 |
1.090 |
C15 |
H11 |
1.100 |
1.090 |
C20 |
H12 |
1.100 |
1.090 |
C20 |
H13 |
1.100 |
1.090 |
C19 |
H14 |
1.100 |
1.090 |
C19 |
H15 |
1.100 |
1.090 |
C18 |
H16 |
1.100 |
1.090 |
C18 |
H17 |
1.100 |
1.090 |
C17 |
H18 |
1.100 |
1.089 |
C17 |
H19 |
1.100 |
1.091 |
C16 |
H20 |
1.100 |
1.091 |
C16 |
H21 |
1.100 |
1.090 |
Bond Angles for F48
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C13 |
C14 |
N4 |
177.2 |
180.0 |
C14 |
C13 |
H9 |
108.8 |
109.5 |
C14 |
C13 |
H10 |
108.7 |
109.5 |
C13 |
C12 |
H7 |
108.0 |
109.5 |
C13 |
C12 |
H8 |
108.0 |
109.5 |
C10 |
C11 |
O |
109.4 |
108.7 |
C11 |
C10 |
H6 |
126.4 |
126.4 |
C10 |
C9 |
H5 |
126.6 |
126.6 |
C12 |
C11 |
O |
113.4 |
125.6 |
C8 |
C7 |
N3 |
122.2 |
125.2 |
C8 |
C7 |
N2 |
124.7 |
125.2 |
C19 |
C20 |
H12 |
109.4 |
109.5 |
C19 |
C20 |
H13 |
109.3 |
109.4 |
C19 |
C18 |
C17 |
111.2 |
109.5 |
C18 |
C19 |
H14 |
109.1 |
109.4 |
C18 |
C19 |
H15 |
109.1 |
109.5 |
C19 |
C18 |
H16 |
109.0 |
109.5 |
C19 |
C18 |
H17 |
109.0 |
109.5 |
C20 |
C15 |
C16 |
114.3 |
109.5 |
C20 |
C15 |
H11 |
104.6 |
109.5 |
N2 |
C7 |
N3 |
113.1 |
109.6 |
C7 |
N3 |
C |
104.6 |
109.6 |
C7 |
N2 |
C1 |
106.7 |
107.2 |
C18 |
C17 |
C16 |
111.3 |
109.4 |
C17 |
C18 |
H16 |
109.1 |
109.4 |
C17 |
C18 |
H17 |
109.0 |
109.4 |
C18 |
C17 |
H18 |
109.0 |
109.5 |
C18 |
C17 |
H19 |
109.0 |
109.5 |
C15 |
N2 |
C1 |
127.4 |
126.4 |
C15 |
C16 |
C17 |
110.0 |
109.5 |
C16 |
C15 |
H11 |
104.6 |
109.4 |
C15 |
C16 |
H20 |
109.3 |
109.5 |
C15 |
C16 |
H21 |
109.3 |
109.5 |
N3 |
C |
C1 |
111.4 |
107.1 |
N2 |
C1 |
C |
104.1 |
106.5 |
N2 |
C1 |
C2 |
136.2 |
135.2 |
C16 |
C17 |
H18 |
109.0 |
109.5 |
C16 |
C17 |
H19 |
109.0 |
109.4 |
C17 |
C16 |
H20 |
109.3 |
109.5 |
C17 |
C16 |
H21 |
109.3 |
109.4 |
C |
C1 |
C2 |
119.7 |
118.3 |
C |
C4 |
N |
123.0 |
121.1 |
C |
C4 |
H1 |
118.5 |
119.4 |
C1 |
C2 |
C3 |
113.6 |
119.1 |
C4 |
N |
C3 |
116.1 |
122.4 |
N |
C4 |
H1 |
118.5 |
119.4 |
C2 |
C5 |
H2 |
126.7 |
126.5 |
N |
C3 |
C2 |
127.0 |
120.2 |
C5 |
C6 |
N1 |
110.2 |
109.8 |
C6 |
C5 |
H2 |
126.7 |
126.5 |
C5 |
C6 |
H3 |
124.9 |
125.2 |
C3 |
N1 |
H4 |
124.9 |
125.0 |
N1 |
C6 |
H3 |
124.9 |
125.0 |
C6 |
N1 |
H4 |
124.9 |
125.0 |
H7 |
C12 |
H8 |
109.5 |
109.4 |
H9 |
C13 |
H10 |
109.4 |
109.5 |
H12 |
C20 |
H13 |
109.4 |
109.5 |
H14 |
C19 |
H15 |
109.5 |
109.6 |
H16 |
C18 |
H17 |
109.5 |
109.5 |
H18 |
C17 |
H19 |
109.5 |
109.5 |
H20 |
C16 |
H21 |
109.5 |
109.5 |
Torsion Angles for F48
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C14 |
C13 |
C12 |
H7 |
349.1 |
60.0 |
C14 |
C13 |
C12 |
H8 |
107.4 |
300.0 |
H9 |
C13 |
C14 |
H10 |
240.9 |
120.1 |
C13 |
C12 |
C11 |
O |
104.2 |
270.3 |
H7 |
C12 |
C13 |
H8 |
241.7 |
120.0 |
N4 |
C14 |
C13 |
H9 |
310.9 |
166.5 |
N4 |
C14 |
C13 |
H10 |
70.0 |
46.5 |
C11 |
C10 |
C9 |
H5 |
179.6 |
180.1 |
C12 |
C11 |
C10 |
O |
182.9 |
180.3 |
C10 |
C11 |
C12 |
O |
177.0 |
179.6 |
C12 |
C11 |
C10 |
H6 |
3.2 |
0.4 |
O |
C11 |
C10 |
H6 |
180.3 |
180.1 |
C9 |
C8 |
C7 |
N3 |
333.5 |
16.5 |
N2 |
C7 |
C8 |
N3 |
181.5 |
179.9 |
C8 |
C7 |
N3 |
C |
181.9 |
180.0 |
C8 |
C7 |
N2 |
C1 |
178.4 |
180.0 |
C19 |
C20 |
C15 |
C16 |
305.8 |
300.0 |
C19 |
C20 |
C15 |
H11 |
59.6 |
59.9 |
H12 |
C20 |
C19 |
H13 |
240.2 |
120.0 |
C18 |
C19 |
C20 |
H12 |
175.4 |
300.0 |
C18 |
C19 |
C20 |
H13 |
295.2 |
180.0 |
C19 |
C18 |
C17 |
C16 |
57.2 |
60.0 |
C17 |
C18 |
C19 |
H16 |
239.7 |
240.0 |
C17 |
C18 |
C19 |
H17 |
120.2 |
119.9 |
C19 |
C18 |
C17 |
H18 |
177.5 |
180.0 |
C19 |
C18 |
C17 |
H19 |
296.9 |
300.1 |
H14 |
C19 |
C18 |
H15 |
119.5 |
120.1 |
H16 |
C18 |
C19 |
H17 |
240.5 |
239.9 |
C20 |
C15 |
C16 |
C17 |
53.4 |
60.0 |
C16 |
C15 |
C20 |
H11 |
246.2 |
240.1 |
C20 |
C15 |
C16 |
H20 |
173.5 |
180.0 |
C20 |
C15 |
C16 |
H21 |
293.3 |
300.0 |
C8 |
C7 |
N3 |
N2 |
181.3 |
179.9 |
N3 |
C7 |
N2 |
C1 |
359.8 |
360.0 |
C7 |
N3 |
C |
C1 |
359.2 |
360.0 |
C8 |
C7 |
N2 |
N3 |
178.7 |
180.1 |
N2 |
C7 |
N3 |
C |
0.6 |
0.0 |
C15 |
N2 |
C7 |
C1 |
178.6 |
180.0 |
C7 |
N2 |
C1 |
C |
359.7 |
0.0 |
C7 |
N2 |
C1 |
C2 |
180.7 |
180.0 |
C17 |
C18 |
C19 |
H14 |
181.9 |
180.0 |
C17 |
C18 |
C19 |
H15 |
62.4 |
59.9 |
C19 |
C18 |
C17 |
H16 |
120.3 |
120.0 |
C19 |
C18 |
C17 |
H17 |
239.8 |
240.0 |
C15 |
C16 |
C17 |
C18 |
306.5 |
300.0 |
C16 |
C17 |
C18 |
H18 |
239.7 |
240.0 |
C16 |
C17 |
C18 |
H19 |
120.3 |
119.9 |
C18 |
C17 |
C16 |
H20 |
186.4 |
180.0 |
C18 |
C17 |
C16 |
H21 |
66.6 |
60.0 |
H16 |
C18 |
C17 |
H17 |
119.5 |
120.0 |
H18 |
C17 |
C18 |
H19 |
240.6 |
240.0 |
C7 |
N2 |
C15 |
C1 |
181.7 |
180.0 |
C15 |
N2 |
C1 |
C |
181.2 |
180.0 |
C15 |
N2 |
C1 |
C2 |
2.1 |
0.0 |
C20 |
C15 |
C16 |
H11 |
113.8 |
120.0 |
C18 |
C17 |
C16 |
C15 |
306.5 |
300.0 |
C16 |
C15 |
N2 |
C1 |
295.7 |
299.9 |
C15 |
C16 |
C17 |
H18 |
186.2 |
180.0 |
C15 |
C16 |
C17 |
H19 |
66.8 |
60.0 |
C17 |
C16 |
C15 |
H20 |
239.9 |
240.0 |
C17 |
C16 |
C15 |
H21 |
120.1 |
120.0 |
H20 |
C16 |
C15 |
H21 |
240.2 |
240.0 |
N2 |
C1 |
C |
N3 |
0.6 |
0.0 |
N3 |
C |
C1 |
C2 |
179.9 |
180.0 |
N3 |
C |
C4 |
N |
182.1 |
180.0 |
N3 |
C |
C4 |
H1 |
2.1 |
359.7 |
C1 |
N2 |
C7 |
N3 |
359.8 |
360.0 |
N3 |
C |
C1 |
N2 |
0.6 |
0.0 |
C |
C1 |
N2 |
C2 |
179.1 |
180.0 |
N2 |
C1 |
C2 |
C3 |
177.1 |
180.2 |
C16 |
C17 |
C18 |
H16 |
296.9 |
300.0 |
C16 |
C17 |
C18 |
H17 |
177.4 |
180.0 |
C18 |
C17 |
C16 |
H18 |
120.3 |
120.0 |
C18 |
C17 |
C16 |
H19 |
239.7 |
240.0 |
C17 |
C16 |
C15 |
H11 |
299.6 |
300.0 |
C15 |
C16 |
C17 |
H20 |
120.1 |
120.0 |
C15 |
C16 |
C17 |
H21 |
239.9 |
240.0 |
H18 |
C17 |
C16 |
H19 |
119.4 |
120.0 |
H20 |
C16 |
C17 |
H21 |
119.8 |
120.0 |
N2 |
C1 |
C |
C2 |
180.8 |
180.0 |
C1 |
C |
C4 |
N |
1.3 |
360.0 |
C1 |
C |
C4 |
H1 |
181.3 |
179.7 |
C |
C1 |
C2 |
C3 |
358.1 |
0.2 |
C |
C4 |
N |
C3 |
358.4 |
359.7 |
N |
C4 |
C |
H1 |
180.0 |
180.3 |
N2 |
C1 |
C2 |
C |
178.9 |
180.0 |
C1 |
C2 |
C5 |
H2 |
357.3 |
0.3 |
N |
C3 |
C2 |
C1 |
1.7 |
359.6 |
C |
C4 |
N |
H1 |
180.0 |
179.7 |
C4 |
N |
C3 |
C2 |
0.0 |
0.5 |
C6 |
C5 |
C2 |
H2 |
180.0 |
179.7 |
C2 |
C5 |
C6 |
H3 |
180.7 |
180.2 |
C3 |
C2 |
C5 |
H2 |
179.2 |
180.1 |
C2 |
C3 |
N1 |
H4 |
179.7 |
179.9 |
C2 |
C5 |
C6 |
H2 |
180.0 |
180.3 |
N1 |
C6 |
C5 |
H3 |
180.0 |
180.1 |
C5 |
C6 |
N1 |
H4 |
179.7 |
179.9 |
C1 |
C2 |
C3 |
N |
1.7 |
359.6 |
C3 |
N |
C4 |
H1 |
178.4 |
180.0 |
N |
C3 |
N1 |
H4 |
0.1 |
0.4 |
C4 |
N |
C3 |
N1 |
179.6 |
180.0 |
C3 |
N1 |
C6 |
H3 |
179.8 |
179.9 |
C6 |
N1 |
C3 |
H4 |
180.0 |
180.1 |
N1 |
C6 |
C5 |
H2 |
180.7 |
179.9 |
C5 |
C6 |
N1 |
H3 |
180.0 |
179.9 |
C3 |
N1 |
C6 |
H4 |
180.0 |
179.9 |
C |
C4 |
H1 |
N |
180.0 |
180.3 |
H1 |
C4 |
N |
C3 |
178.4 |
180.0 |
H2 |
C5 |
C6 |
N1 |
180.7 |
179.9 |
H2 |
C5 |
C6 |
H3 |
0.7 |
359.9 |
C5 |
C6 |
H3 |
N1 |
180.0 |
180.1 |
H3 |
C6 |
C5 |
H2 |
0.7 |
359.9 |
H3 |
C6 |
N1 |
H4 |
359.7 |
360.0 |
H4 |
N1 |
C6 |
H3 |
359.7 |
360.0 |
H6 |
C10 |
C11 |
O |
180.3 |
180.1 |
H6 |
C10 |
C9 |
H5 |
359.6 |
359.7 |
C13 |
C12 |
H7 |
H8 |
117.3 |
239.9 |
H7 |
C12 |
C11 |
O |
343.3 |
30.3 |
C13 |
C12 |
H8 |
H7 |
242.7 |
120.0 |
H8 |
C12 |
C11 |
O |
225.0 |
150.3 |
H9 |
C13 |
C14 |
N4 |
310.9 |
166.5 |
C14 |
C13 |
H9 |
H10 |
118.7 |
239.9 |
H9 |
C13 |
C12 |
H7 |
228.7 |
180.0 |
H9 |
C13 |
C12 |
H8 |
346.9 |
60.0 |
H10 |
C13 |
C14 |
N4 |
70.0 |
46.5 |
C14 |
C13 |
H10 |
H9 |
241.3 |
120.1 |
H10 |
C13 |
C12 |
H7 |
109.5 |
300.0 |
H10 |
C13 |
C12 |
H8 |
227.8 |
180.0 |
C20 |
C15 |
H11 |
C16 |
239.5 |
240.0 |
H11 |
C15 |
N2 |
C1 |
182.0 |
180.0 |
H11 |
C15 |
C16 |
C17 |
299.6 |
300.0 |
H11 |
C15 |
C16 |
H20 |
59.6 |
60.0 |
H11 |
C15 |
C16 |
H21 |
179.5 |
180.0 |
C19 |
C20 |
H12 |
H13 |
119.8 |
240.0 |
H12 |
C20 |
C15 |
C16 |
185.7 |
60.0 |
H12 |
C20 |
C15 |
H11 |
299.5 |
179.9 |
C19 |
C20 |
H13 |
H12 |
240.2 |
120.0 |
H13 |
C20 |
C15 |
C16 |
65.9 |
180.0 |
H13 |
C20 |
C15 |
H11 |
179.7 |
300.0 |
H14 |
C19 |
C20 |
H12 |
295.7 |
60.0 |
H14 |
C19 |
C20 |
H13 |
55.5 |
299.9 |
H14 |
C19 |
C18 |
C17 |
181.9 |
180.0 |
C18 |
C19 |
H14 |
H15 |
240.7 |
240.0 |
H14 |
C19 |
C18 |
H16 |
302.2 |
300.0 |
H14 |
C19 |
C18 |
H17 |
61.7 |
60.1 |
H15 |
C19 |
C20 |
H12 |
55.2 |
180.1 |
H15 |
C19 |
C20 |
H13 |
175.0 |
60.0 |
H15 |
C19 |
C18 |
C17 |
62.4 |
59.9 |
C18 |
C19 |
H15 |
H14 |
119.3 |
120.0 |
H15 |
C19 |
C18 |
H16 |
182.6 |
179.9 |
H15 |
C19 |
C18 |
H17 |
302.1 |
300.0 |
C19 |
C18 |
H16 |
C17 |
238.4 |
240.0 |
H16 |
C18 |
C19 |
H14 |
302.2 |
300.0 |
H16 |
C18 |
C19 |
H15 |
182.6 |
179.9 |
C19 |
C18 |
H16 |
H17 |
119.2 |
120.1 |
H16 |
C18 |
C17 |
C16 |
296.9 |
300.0 |
C17 |
C18 |
H16 |
H17 |
240.8 |
240.1 |
H16 |
C18 |
C17 |
H18 |
57.2 |
60.0 |
H16 |
C18 |
C17 |
H19 |
176.6 |
180.0 |
C19 |
C18 |
H17 |
C17 |
121.5 |
120.0 |
H17 |
C18 |
C19 |
H14 |
61.7 |
60.1 |
H17 |
C18 |
C19 |
H15 |
302.1 |
300.0 |
C19 |
C18 |
H17 |
H16 |
240.8 |
239.9 |
H17 |
C18 |
C17 |
C16 |
177.4 |
180.0 |
C17 |
C18 |
H17 |
H16 |
119.3 |
120.0 |
H17 |
C18 |
C17 |
H18 |
297.7 |
300.0 |
H17 |
C18 |
C17 |
H19 |
57.1 |
60.0 |
C18 |
C17 |
H18 |
C16 |
238.3 |
240.0 |
H18 |
C17 |
C18 |
H16 |
57.2 |
60.0 |
H18 |
C17 |
C18 |
H17 |
297.7 |
300.0 |
C18 |
C17 |
H18 |
H19 |
119.2 |
120.0 |
C16 |
C17 |
H18 |
H19 |
240.9 |
240.0 |
H18 |
C17 |
C16 |
H20 |
66.1 |
60.0 |
H18 |
C17 |
C16 |
H21 |
306.3 |
300.0 |
C18 |
C17 |
H19 |
C16 |
121.7 |
119.9 |
H19 |
C17 |
C18 |
H16 |
176.6 |
180.0 |
H19 |
C17 |
C18 |
H17 |
57.1 |
60.0 |
C18 |
C17 |
H19 |
H18 |
240.9 |
240.0 |
C16 |
C17 |
H19 |
H18 |
119.2 |
120.0 |
H19 |
C17 |
C16 |
H20 |
306.7 |
300.0 |
H19 |
C17 |
C16 |
H21 |
186.9 |
180.0 |
C15 |
C16 |
H20 |
C17 |
239.5 |
239.9 |
H20 |
C16 |
C15 |
H11 |
59.6 |
60.0 |
C15 |
C16 |
H20 |
H21 |
119.8 |
120.0 |
H20 |
C16 |
C17 |
H18 |
66.1 |
60.0 |
H20 |
C16 |
C17 |
H19 |
306.7 |
300.0 |
C17 |
C16 |
H20 |
H21 |
240.2 |
240.1 |
C15 |
C16 |
H21 |
C17 |
120.5 |
120.0 |
H21 |
C16 |
C15 |
H11 |
179.5 |
180.0 |
C15 |
C16 |
H21 |
H20 |
240.2 |
240.0 |
H21 |
C16 |
C17 |
H18 |
306.3 |
300.0 |
H21 |
C16 |
C17 |
H19 |
186.9 |
180.0 |
C17 |
C16 |
H21 |
H20 |
119.8 |
120.0 |