PDB Chemical Component F2F
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for F2F
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O |
C |
1.213 |
1.208 |
| C |
CA |
1.502 |
1.507 |
| C |
OXT |
1.430 |
1.342 |
| CA |
N |
1.472 |
1.469 |
| CA |
CB |
1.544 |
1.530 |
| CA |
HA |
1.100 |
1.090 |
| N |
H |
1.000 |
1.010 |
| N |
H2 |
1.001 |
1.009 |
| CB |
CG |
1.506 |
1.507 |
| CB |
HB |
1.100 |
1.090 |
| CB |
HBA |
1.100 |
1.090 |
| CG |
CD2 |
1.390 |
1.383 |
| CG |
CD1 |
1.391 |
1.382 |
| CD2 |
CE2 |
1.381 |
1.384 |
| CD2 |
HD2 |
1.080 |
1.080 |
| CE2 |
F2 |
1.333 |
1.351 |
| CE2 |
CZ |
1.368 |
1.387 |
| CZ |
F1 |
1.340 |
1.351 |
| CZ |
CE1 |
1.393 |
1.384 |
| CE1 |
CD1 |
1.387 |
1.382 |
| CE1 |
HE1 |
1.080 |
1.080 |
| CD1 |
HD1 |
1.080 |
1.080 |
| OXT |
HXT |
0.950 |
0.967 |
Bond Angles for F2F
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O |
C |
CA |
118.1 |
120.0 |
| O |
C |
OXT |
120.9 |
120.0 |
| CA |
C |
OXT |
121.0 |
120.0 |
| C |
CA |
N |
112.9 |
109.5 |
| C |
CA |
CB |
106.5 |
109.5 |
| C |
CA |
HA |
110.0 |
109.5 |
| C |
OXT |
HXT |
109.5 |
117.0 |
| N |
CA |
CB |
111.7 |
109.4 |
| N |
CA |
HA |
104.6 |
109.4 |
| CA |
N |
H |
109.5 |
111.0 |
| CA |
N |
H2 |
109.5 |
111.1 |
| CB |
CA |
HA |
111.3 |
109.5 |
| CA |
CB |
CG |
109.4 |
109.5 |
| CA |
CB |
HB |
109.5 |
109.5 |
| CA |
CB |
HBA |
109.5 |
109.4 |
| H |
N |
H2 |
109.5 |
111.0 |
| CG |
CB |
HB |
109.5 |
109.5 |
| CG |
CB |
HBA |
109.5 |
109.5 |
| CB |
CG |
CD2 |
118.4 |
119.9 |
| CB |
CG |
CD1 |
121.4 |
120.0 |
| HB |
CB |
HBA |
109.4 |
109.4 |
| CD2 |
CG |
CD1 |
120.1 |
120.1 |
| CG |
CD2 |
CE2 |
119.6 |
120.0 |
| CG |
CD2 |
HD2 |
120.2 |
120.0 |
| CG |
CD1 |
CE1 |
119.8 |
120.1 |
| CG |
CD1 |
HD1 |
120.1 |
120.0 |
| CE2 |
CD2 |
HD2 |
120.2 |
120.0 |
| CD2 |
CE2 |
F2 |
121.2 |
120.1 |
| CD2 |
CE2 |
CZ |
120.5 |
119.9 |
| F2 |
CE2 |
CZ |
118.3 |
120.0 |
| CE2 |
CZ |
F1 |
117.0 |
120.1 |
| CE2 |
CZ |
CE1 |
120.6 |
119.9 |
| F1 |
CZ |
CE1 |
122.4 |
120.0 |
| CZ |
CE1 |
CD1 |
119.4 |
120.0 |
| CZ |
CE1 |
HE1 |
120.3 |
120.0 |
| CD1 |
CE1 |
HE1 |
120.3 |
120.0 |
| CE1 |
CD1 |
HD1 |
120.1 |
119.9 |
Torsion Angles for F2F
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
C |
O |
OXT |
180.0 |
180.2 |
| O |
C |
CA |
N |
243.7 |
340.0 |
| O |
C |
CA |
CB |
6.7 |
100.0 |
| O |
C |
CA |
HA |
127.3 |
220.0 |
| O |
C |
OXT |
HXT |
0.0 |
360.0 |
| O |
C |
CA |
OXT |
180.0 |
179.8 |
| CA |
C |
OXT |
HXT |
180.1 |
179.7 |
| N |
CA |
C |
CB |
237.1 |
240.1 |
| N |
CA |
C |
HA |
116.4 |
120.0 |
| C |
CA |
N |
H |
230.3 |
296.0 |
| C |
CA |
N |
H2 |
350.3 |
60.0 |
| CB |
CA |
C |
HA |
239.3 |
240.0 |
| C |
CA |
CB |
CG |
192.7 |
175.0 |
| C |
CA |
CB |
HB |
312.7 |
295.1 |
| C |
CA |
CB |
HBA |
72.7 |
55.0 |
| O |
C |
OXT |
CA |
180.0 |
180.2 |
| OXT |
C |
CA |
N |
63.7 |
160.3 |
| OXT |
C |
CA |
CB |
186.6 |
280.2 |
| OXT |
C |
CA |
HA |
307.3 |
40.3 |
| N |
CA |
C |
OXT |
63.7 |
160.3 |
| C |
CA |
N |
CB |
120.0 |
120.0 |
| C |
CA |
N |
HA |
240.4 |
239.9 |
| CB |
CA |
N |
HA |
120.5 |
119.9 |
| N |
CA |
CB |
CG |
316.4 |
295.0 |
| N |
CA |
CB |
HB |
76.5 |
55.0 |
| N |
CA |
CB |
HBA |
196.4 |
175.0 |
| H |
N |
CA |
H2 |
240.0 |
236.0 |
| CB |
CA |
C |
OXT |
186.6 |
280.2 |
| C |
CA |
CB |
N |
236.3 |
240.0 |
| C |
CA |
CB |
HA |
119.8 |
120.1 |
| N |
CA |
CB |
HA |
243.5 |
240.1 |
| CB |
CA |
N |
H |
110.3 |
176.0 |
| CB |
CA |
N |
H2 |
230.3 |
300.0 |
| CG |
CB |
CA |
HB |
240.0 |
239.9 |
| CG |
CB |
CA |
HBA |
120.0 |
120.0 |
| CA |
CB |
CG |
CD2 |
289.3 |
90.0 |
| CA |
CB |
CG |
CD1 |
107.0 |
269.8 |
| HB |
CB |
CA |
HBA |
240.1 |
240.1 |
| HA |
CA |
C |
OXT |
307.3 |
40.3 |
| C |
CA |
HA |
N |
121.5 |
120.0 |
| C |
CA |
HA |
CB |
242.3 |
239.9 |
| N |
CA |
HA |
CB |
120.7 |
119.9 |
| HA |
CA |
N |
H |
349.8 |
56.1 |
| HA |
CA |
N |
H2 |
109.8 |
180.1 |
| HA |
CA |
CB |
CG |
72.9 |
54.9 |
| HA |
CA |
CB |
HB |
192.9 |
175.0 |
| HA |
CA |
CB |
HBA |
312.8 |
294.9 |
| H |
N |
CA |
CB |
110.3 |
176.0 |
| H |
N |
CA |
HA |
349.8 |
56.1 |
| CA |
N |
H |
H2 |
120.0 |
124.0 |
| H2 |
N |
CA |
CB |
230.3 |
300.0 |
| H2 |
N |
CA |
HA |
109.8 |
180.1 |
| CA |
N |
H2 |
H |
240.0 |
236.0 |
| CG |
CB |
CA |
HA |
72.9 |
54.9 |
| CA |
CB |
CG |
HB |
120.0 |
120.1 |
| CA |
CB |
CG |
HBA |
240.0 |
240.1 |
| HB |
CB |
CG |
HBA |
120.0 |
120.0 |
| CD2 |
CG |
CB |
CD1 |
182.3 |
180.3 |
| CB |
CG |
CD2 |
CE2 |
177.9 |
180.0 |
| CB |
CG |
CD2 |
HD2 |
357.9 |
0.0 |
| CB |
CG |
CD1 |
CE1 |
182.0 |
179.7 |
| CB |
CG |
CD1 |
HD1 |
2.0 |
0.1 |
| HB |
CB |
CA |
HA |
192.9 |
175.0 |
| CA |
CB |
HB |
CG |
240.0 |
239.9 |
| CA |
CB |
HB |
HBA |
120.0 |
119.9 |
| CG |
CB |
HB |
HBA |
240.0 |
240.0 |
| HB |
CB |
CG |
CD2 |
169.3 |
330.0 |
| HB |
CB |
CG |
CD1 |
347.0 |
149.7 |
| HBA |
CB |
CA |
HA |
312.8 |
294.9 |
| CA |
CB |
HBA |
CG |
120.0 |
120.0 |
| CA |
CB |
HBA |
HB |
240.0 |
240.0 |
| CG |
CB |
HBA |
HB |
120.0 |
120.0 |
| HBA |
CB |
CG |
CD2 |
49.3 |
210.0 |
| HBA |
CB |
CG |
CD1 |
227.0 |
29.7 |
| CD2 |
CG |
CB |
HB |
169.3 |
330.0 |
| CD2 |
CG |
CB |
HBA |
49.3 |
210.0 |
| CB |
CG |
CD2 |
CD1 |
177.8 |
179.7 |
| CD2 |
CG |
CD1 |
CE1 |
359.7 |
359.4 |
| CD2 |
CG |
CD1 |
HD1 |
179.7 |
179.8 |
| CE2 |
CD2 |
CG |
HD2 |
180.0 |
180.0 |
| CG |
CD2 |
CE2 |
F2 |
179.3 |
180.0 |
| CG |
CD2 |
CE2 |
CZ |
0.4 |
0.0 |
| CD1 |
CG |
CB |
HB |
347.0 |
149.7 |
| CD1 |
CG |
CB |
HBA |
227.0 |
29.7 |
| CB |
CG |
CD1 |
CD2 |
182.3 |
180.3 |
| CD1 |
CG |
CD2 |
CE2 |
0.1 |
0.3 |
| CD1 |
CG |
CD2 |
HD2 |
180.1 |
180.3 |
| CZ |
CE1 |
CD1 |
CG |
0.0 |
0.6 |
| CG |
CD1 |
CE1 |
HE1 |
180.0 |
180.2 |
| CE1 |
CD1 |
CG |
HD1 |
180.0 |
179.7 |
| CE2 |
CD2 |
CG |
CD1 |
0.1 |
0.3 |
| CG |
CD2 |
CE2 |
HD2 |
180.0 |
180.0 |
| F2 |
CE2 |
CD2 |
CZ |
178.9 |
180.0 |
| CD2 |
CE2 |
CZ |
F1 |
179.3 |
180.0 |
| CD2 |
CE2 |
CZ |
CE1 |
359.3 |
360.0 |
| HD2 |
CD2 |
CG |
CD1 |
180.1 |
180.3 |
| CG |
CD2 |
HD2 |
CE2 |
180.0 |
180.0 |
| HD2 |
CD2 |
CE2 |
F2 |
359.3 |
0.0 |
| HD2 |
CD2 |
CE2 |
CZ |
180.4 |
180.0 |
| F2 |
CE2 |
CD2 |
HD2 |
359.3 |
0.0 |
| CD2 |
CE2 |
F2 |
CZ |
181.1 |
180.0 |
| F2 |
CE2 |
CZ |
F1 |
0.4 |
0.0 |
| F2 |
CE2 |
CZ |
CE1 |
180.4 |
180.0 |
| CZ |
CE2 |
CD2 |
HD2 |
180.4 |
180.0 |
| CD2 |
CE2 |
CZ |
F2 |
178.9 |
180.0 |
| F1 |
CZ |
CE2 |
CE1 |
180.0 |
180.1 |
| CE2 |
CZ |
CE1 |
CD1 |
0.4 |
359.7 |
| CE2 |
CZ |
CE1 |
HE1 |
180.4 |
180.1 |
| CE2 |
CZ |
F1 |
CE1 |
180.0 |
179.9 |
| F1 |
CZ |
CE1 |
CD1 |
180.5 |
179.7 |
| F1 |
CZ |
CE1 |
HE1 |
0.5 |
0.0 |
| CG |
CD1 |
CE1 |
CZ |
0.0 |
0.6 |
| CE2 |
CZ |
CE1 |
F1 |
180.0 |
180.1 |
| CD1 |
CE1 |
CZ |
HE1 |
180.0 |
179.7 |
| CZ |
CE1 |
CD1 |
HD1 |
180.0 |
180.2 |
| CG |
CD1 |
CE1 |
HD1 |
180.0 |
180.3 |
| CZ |
CE1 |
CD1 |
HE1 |
180.0 |
180.3 |
| CZ |
CE1 |
HE1 |
CD1 |
180.0 |
179.7 |
| HE1 |
CE1 |
CD1 |
HD1 |
0.0 |
359.9 |
| CG |
CD1 |
HD1 |
CE1 |
180.0 |
179.7 |
| HD1 |
CD1 |
CE1 |
HE1 |
0.0 |
359.9 |