PDB Chemical Component F09

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for F09

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.529	1.529
C1	H11	1.114	1.089
C1	H12	1.115	1.090
C1	H13	1.116	1.090
C2	C3	1.535	1.529
C2	H21	1.115	1.090
C2	H22	1.115	1.090
C3	C4	1.536	1.530
C3	H31	1.115	1.090
C3	H32	1.115	1.090
C4	C5	1.536	1.530
C4	H41	1.115	1.090
C4	H42	1.115	1.090
C5	C6	1.527	1.529
C5	H51	1.114	1.090
C5	H52	1.116	1.090
C6	C7	1.522	1.530
C6	H61	1.116	1.090
C6	H62	1.115	1.090
C7	C8	1.526	1.529
C7	H71	1.115	1.090
C7	H72	1.115	1.090
C8	C9	1.530	1.530
C8	H81	1.115	1.090
C8	H82	1.114	1.090
C9	OXT	1.238	1.428
C9	H91	1.116	1.090
C9	H92	1.115	1.090
OXT	HXT	0.950	0.966

Bond Angles for F09

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	H11	112.5	109.5
C2	C1	H12	111.1	109.4
C2	C1	H13	111.1	109.4
C1	C2	C3	112.5	109.5
C1	C2	H21	111.1	109.5
C1	C2	H22	111.1	109.5
H11	C1	H12	111.2	109.5
H11	C1	H13	111.1	109.5
H12	C1	H13	99.2	109.5
C3	C2	H21	111.1	109.5
C3	C2	H22	111.1	109.5
C2	C3	C4	113.0	109.5
C2	C3	H31	111.0	109.5
C2	C3	H32	110.9	109.5
H21	C2	H22	99.2	109.4
C4	C3	H31	110.9	109.5
C4	C3	H32	110.9	109.5
C3	C4	C5	113.4	109.5
C3	C4	H41	110.8	109.5
C3	C4	H42	110.8	109.5
H31	C3	H32	99.4	109.5
C5	C4	H41	110.7	109.5
C5	C4	H42	110.7	109.5
C4	C5	C6	111.6	109.5
C4	C5	H51	111.4	109.5
C4	C5	H52	111.4	109.5
H41	C4	H42	99.6	109.5
C6	C5	H51	111.4	109.5
C6	C5	H52	111.4	109.5
C5	C6	C7	112.7	109.5
C5	C6	H61	111.0	109.5
C5	C6	H62	111.0	109.5
H51	C5	H52	99.0	109.5
C7	C6	H61	111.0	109.4
C7	C6	H62	111.0	109.4
C6	C7	C8	110.1	109.5
C6	C7	H71	112.0	109.4
C6	C7	H72	112.0	109.4
H61	C6	H62	99.3	109.5
C8	C7	H71	112.0	109.5
C8	C7	H72	112.0	109.5
C7	C8	C9	112.8	109.5
C7	C8	H81	111.0	109.5
C7	C8	H82	111.0	109.5
H71	C7	H72	98.4	109.4
C9	C8	H81	111.0	109.4
C9	C8	H82	111.0	109.4
C8	C9	OXT	121.4	109.5
C8	C9	H91	107.9	109.4
C8	C9	H92	108.0	109.4
H81	C8	H82	99.3	109.5
OXT	C9	H91	108.0	109.5
OXT	C9	H92	108.0	109.5
C9	OXT	HXT	121.4	106.8
H91	C9	H92	101.9	109.5

Torsion Angles for F09

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
H11	C1	C2	H12	234.7	240.0
H11	C1	C2	H13	125.3	120.0
H12	C1	C2	H13	250.6	240.0
C3	C2	C1	H21	234.8	240.0
C3	C2	C1	H22	125.3	120.0
C1	C2	C3	C4	281.2	180.0
C1	C2	C3	H31	46.5	300.0
C1	C2	C3	H32	156.0	60.0
H21	C2	C1	H22	250.5	240.1
C2	C1	H11	H12	125.3	120.0
C2	C1	H11	H13	234.8	240.0
H11	C1	C2	C3	180.0	180.0
H11	C1	C2	H21	305.2	300.0
H11	C1	C2	H22	54.7	60.0
H12	C1	H11	H13	109.5	120.0
C2	C1	H12	H11	233.9	239.9
C2	C1	H12	H13	116.9	120.0
H12	C1	C2	C3	305.3	300.0
H12	C1	C2	H21	70.6	60.1
H12	C1	C2	H22	180.1	180.0
H11	C1	H12	H13	243.0	240.0
C2	C1	H13	H11	126.0	120.1
C2	C1	H13	H12	243.1	240.0
H13	C1	C2	C3	54.7	60.0
H13	C1	C2	H21	180.0	180.0
H13	C1	C2	H22	289.5	299.9
H11	C1	H13	H12	117.0	120.0
C3	C2	C1	H11	180.0	180.0
C3	C2	C1	H12	305.3	300.0
C3	C2	C1	H13	54.7	60.0
C1	C2	C3	H21	125.3	120.0
C1	C2	C3	H22	234.7	240.0
H21	C2	C3	H22	109.5	119.9
C4	C3	C2	H31	234.7	240.0
C4	C3	C2	H32	125.2	120.0
C2	C3	C4	C5	274.3	180.0
C2	C3	C4	H41	39.6	300.0
C2	C3	C4	H42	149.1	60.0
H31	C3	C2	H32	250.5	240.0
H21	C2	C1	H11	305.2	300.0
H21	C2	C1	H12	70.6	60.1
H21	C2	C1	H13	180.0	180.0
C1	C2	H21	C3	234.0	239.9
C1	C2	H21	H22	117.0	119.9
C3	C2	H21	H22	243.0	240.0
H21	C2	C3	C4	156.0	60.0
H21	C2	C3	H31	281.2	180.0
H21	C2	C3	H32	30.7	300.0
H22	C2	C1	H11	54.7	60.0
H22	C2	C1	H12	180.1	180.0
H22	C2	C1	H13	289.5	299.9
C1	C2	H22	C3	126.0	120.1
C1	C2	H22	H21	243.0	240.1
C3	C2	H22	H21	117.0	120.0
H22	C2	C3	C4	46.5	300.0
H22	C2	C3	H31	171.7	60.0
H22	C2	C3	H32	281.3	180.0
C4	C3	C2	H21	156.0	60.0
C4	C3	C2	H22	46.5	300.0
C2	C3	C4	H31	125.3	120.0
C2	C3	C4	H32	234.8	240.0
H31	C3	C4	H32	109.5	120.0
C5	C4	C3	H41	234.8	240.0
C5	C4	C3	H42	125.2	120.0
C3	C4	C5	C6	284.0	180.0
C3	C4	C5	H51	49.2	300.0
C3	C4	C5	H52	158.8	60.0
H41	C4	C3	H42	250.5	240.0
H31	C3	C2	H21	281.2	180.0
H31	C3	C2	H22	171.7	60.0
C2	C3	H31	C4	233.6	240.0
C2	C3	H31	H32	116.8	120.0
C4	C3	H31	H32	243.3	240.0
H31	C3	C4	C5	149.0	60.0
H31	C3	C4	H41	274.3	180.0
H31	C3	C4	H42	23.8	300.0
H32	C3	C2	H21	30.7	300.0
H32	C3	C2	H22	281.3	180.0
C2	C3	H32	C4	126.4	120.0
C2	C3	H32	H31	243.1	240.0
C4	C3	H32	H31	116.7	120.0
H32	C3	C4	C5	39.6	300.0
H32	C3	C4	H41	164.8	60.0
H32	C3	C4	H42	274.4	180.0
C5	C4	C3	H31	149.0	60.0
C5	C4	C3	H32	39.6	300.0
C3	C4	C5	H41	125.3	120.0
C3	C4	C5	H42	234.7	240.0
H41	C4	C5	H42	109.5	120.0
C6	C5	C4	H51	234.8	240.0
C6	C5	C4	H52	125.2	120.0
C4	C5	C6	C7	185.4	180.0
C4	C5	C6	H61	310.6	300.0
C4	C5	C6	H62	60.1	60.0
H51	C5	C4	H52	250.5	240.0
H41	C4	C3	H31	274.3	180.0
H41	C4	C3	H32	164.8	60.0
C3	C4	H41	C5	233.3	240.0
C3	C4	H41	H42	116.7	120.0
C5	C4	H41	H42	243.4	240.0
H41	C4	C5	C6	158.7	60.0
H41	C4	C5	H51	284.0	180.0
H41	C4	C5	H52	33.5	300.0
H42	C4	C3	H31	23.8	300.0
H42	C4	C3	H32	274.4	180.0
C3	C4	H42	C5	126.7	120.0
C3	C4	H42	H41	243.3	240.0
C5	C4	H42	H41	116.6	120.0
H42	C4	C5	C6	49.2	300.0
H42	C4	C5	H51	174.5	60.0
H42	C4	C5	H52	284.0	180.0
C6	C5	C4	H41	158.7	60.0
C6	C5	C4	H42	49.2	300.0
C4	C5	C6	H51	125.3	120.0
C4	C5	C6	H52	234.8	240.0
H51	C5	C6	H52	109.5	120.0
C7	C6	C5	H61	234.8	240.0
C7	C6	C5	H62	125.3	120.0
C5	C6	C7	C8	181.2	180.0
C5	C6	C7	H71	306.5	300.1
C5	C6	C7	H72	55.9	60.0
H61	C6	C5	H62	250.5	240.0
H51	C5	C4	H41	284.0	180.0
H51	C5	C4	H42	174.5	60.0
C4	C5	H51	C6	234.6	240.0
C4	C5	H51	H52	117.3	120.0
C6	C5	H51	H52	242.7	240.0
H51	C5	C6	C7	60.1	60.0
H51	C5	C6	H61	185.3	180.0
H51	C5	C6	H62	294.9	300.0
H52	C5	C4	H41	33.5	300.0
H52	C5	C4	H42	284.0	180.0
C4	C5	H52	C6	125.3	120.0
C4	C5	H52	H51	242.6	240.0
C6	C5	H52	H51	117.3	120.0
H52	C5	C6	C7	310.6	300.0
H52	C5	C6	H61	75.8	60.0
H52	C5	C6	H62	185.4	180.0
C7	C6	C5	H51	60.1	60.0
C7	C6	C5	H52	310.6	300.0
C5	C6	C7	H61	125.2	120.0
C5	C6	C7	H62	234.7	240.0
H61	C6	C7	H62	109.5	120.0
C8	C7	C6	H71	234.7	239.9
C8	C7	C6	H72	125.3	120.0
C6	C7	C8	C9	179.8	180.0
C6	C7	C8	H81	305.0	300.0
C6	C7	C8	H82	54.5	60.0
H71	C7	C6	H72	250.5	240.1
H61	C6	C5	H51	185.3	180.0
H61	C6	C5	H52	75.8	60.0
C5	C6	H61	C7	233.8	240.0
C5	C6	H61	H62	117.0	120.0
C7	C6	H61	H62	243.1	240.0
H61	C6	C7	C8	55.9	60.0
H61	C6	C7	H71	181.2	180.1
H61	C6	C7	H72	290.7	300.0
H62	C6	C5	H51	294.9	300.0
H62	C6	C5	H52	185.4	180.0
C5	C6	H62	C7	126.2	120.0
C5	C6	H62	H61	243.0	240.0
C7	C6	H62	H61	116.9	120.0
H62	C6	C7	C8	306.5	300.0
H62	C6	C7	H71	71.7	60.1
H62	C6	C7	H72	181.2	180.0
C8	C7	C6	H61	55.9	60.0
C8	C7	C6	H62	306.5	300.0
C6	C7	C8	H71	125.3	120.0
C6	C7	C8	H72	234.7	240.0
H71	C7	C8	H72	109.4	120.0
C9	C8	C7	H81	234.7	240.0
C9	C8	C7	H82	125.3	120.0
C7	C8	C9	OXT	294.5	180.0
C7	C8	C9	H91	59.8	300.0
C7	C8	C9	H92	169.2	60.0
H81	C8	C7	H82	250.6	240.0
H71	C7	C6	H61	181.2	180.1
H71	C7	C6	H62	71.7	60.1
C6	C7	H71	C8	235.7	239.9
C6	C7	H71	H72	117.9	119.9
C8	C7	H71	H72	242.1	239.9
H71	C7	C8	C9	54.5	60.0
H71	C7	C8	H81	179.7	180.0
H71	C7	C8	H82	289.2	300.0
H72	C7	C6	H61	290.7	300.0
H72	C7	C6	H62	181.2	180.0
C6	C7	H72	C8	124.2	120.1
C6	C7	H72	H71	242.1	240.1
C8	C7	H72	H71	117.9	120.1
H72	C7	C8	C9	305.0	300.0
H72	C7	C8	H81	70.3	60.0
H72	C7	C8	H82	179.7	180.0
C9	C8	C7	H71	54.5	60.0
C9	C8	C7	H72	305.0	300.0
C7	C8	C9	H81	125.3	120.0
C7	C8	C9	H82	234.7	240.0
H81	C8	C9	H82	109.4	120.0
OXT	C9	C8	H91	234.7	240.0
OXT	C9	C8	H92	125.3	120.0
C8	C9	OXT	HXT	180.0	180.0
H91	C9	C8	H92	250.6	240.0
H81	C8	C7	H71	179.7	180.0
H81	C8	C7	H72	70.3	60.0
C7	C8	H81	C9	233.7	239.9
C7	C8	H81	H82	116.9	120.0
C9	C8	H81	H82	243.2	240.0
H81	C8	C9	OXT	169.2	60.0
H81	C8	C9	H91	294.5	180.0
H81	C8	C9	H92	43.9	300.0
H82	C8	C7	H71	289.2	300.0
H82	C8	C7	H72	179.7	180.0
C7	C8	H82	C9	126.3	120.1
C7	C8	H82	H81	243.1	240.0
C9	C8	H82	H81	116.8	120.0
H82	C8	C9	OXT	59.8	300.0
H82	C8	C9	H91	185.1	60.0
H82	C8	C9	H92	294.5	180.0
OXT	C9	C8	H81	169.2	60.0
OXT	C9	C8	H82	59.8	300.0
C8	C9	OXT	H91	125.3	120.0
C8	C9	OXT	H92	234.7	240.0
H91	C9	OXT	H92	109.4	120.0
H91	C9	C8	H81	294.5	180.0
H91	C9	C8	H82	185.1	60.0
C8	C9	H91	OXT	227.1	239.9
C8	C9	H91	H92	113.5	120.0
OXT	C9	H91	H92	246.4	240.0
H91	C9	OXT	HXT	54.7	60.0
H92	C9	C8	H81	43.9	300.0
H92	C9	C8	H82	294.5	180.0
C8	C9	H92	OXT	132.9	120.1
C8	C9	H92	H91	246.5	240.0
OXT	C9	H92	H91	113.6	120.0
H92	C9	OXT	HXT	305.3	300.0
HXT	OXT	C9	H91	54.7	60.0
HXT	OXT	C9	H92	305.3	300.0