PDB Chemical Component F01
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for F01
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O1 |
C6 |
1.229 |
1.220 |
C6 |
N1 |
1.389 |
1.332 |
C6 |
N3 |
1.409 |
1.346 |
N1 |
C7 |
1.369 |
1.326 |
C7 |
N2 |
1.319 |
1.376 |
C7 |
C8 |
1.378 |
1.411 |
C8 |
F1 |
1.343 |
1.351 |
C8 |
C9 |
1.388 |
1.355 |
C9 |
N3 |
1.411 |
1.364 |
N3 |
C1 |
1.486 |
1.466 |
C1 |
O4 |
1.448 |
1.444 |
C1 |
C2 |
1.533 |
1.545 |
O4 |
C4 |
1.441 |
1.444 |
C4 |
C5 |
1.542 |
1.530 |
C4 |
C3 |
1.522 |
1.545 |
C5 |
O5 |
1.450 |
1.429 |
C3 |
O3 |
1.405 |
1.429 |
C3 |
C2 |
1.517 |
1.545 |
C2 |
O2 |
1.424 |
1.429 |
N2 |
HN2 |
1.000 |
0.970 |
N2 |
HN2A |
1.001 |
0.970 |
C9 |
H9 |
1.080 |
1.081 |
C1 |
H1 |
1.100 |
1.090 |
C4 |
H4 |
1.100 |
1.090 |
C5 |
H5 |
1.100 |
1.090 |
C5 |
H5A |
1.101 |
1.090 |
O5 |
HO5 |
0.950 |
0.967 |
C3 |
H3 |
1.101 |
1.090 |
O3 |
HO3 |
0.950 |
0.967 |
C2 |
H2 |
1.100 |
1.090 |
O2 |
HO2 |
0.950 |
0.967 |
Bond Angles for F01
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
C6 |
N1 |
118.3 |
119.4 |
O1 |
C6 |
N3 |
121.7 |
119.4 |
N1 |
C6 |
N3 |
120.1 |
121.1 |
C6 |
N1 |
C7 |
120.7 |
120.7 |
C6 |
N3 |
C9 |
118.5 |
120.3 |
C6 |
N3 |
C1 |
120.4 |
119.8 |
N1 |
C7 |
N2 |
118.7 |
120.2 |
N1 |
C7 |
C8 |
120.2 |
119.7 |
N2 |
C7 |
C8 |
121.1 |
120.2 |
C7 |
N2 |
HN2 |
110.0 |
120.0 |
C7 |
N2 |
HN2A |
125.0 |
120.1 |
C7 |
C8 |
F1 |
118.9 |
120.5 |
C7 |
C8 |
C9 |
120.8 |
118.9 |
F1 |
C8 |
C9 |
120.2 |
120.6 |
C8 |
C9 |
N3 |
119.7 |
119.3 |
C8 |
C9 |
H9 |
120.1 |
120.4 |
C9 |
N3 |
C1 |
121.2 |
119.8 |
N3 |
C9 |
H9 |
120.1 |
120.4 |
N3 |
C1 |
O4 |
102.4 |
110.4 |
N3 |
C1 |
C2 |
116.6 |
110.3 |
N3 |
C1 |
H1 |
109.0 |
110.3 |
O4 |
C1 |
C2 |
107.3 |
104.8 |
C1 |
O4 |
C4 |
107.8 |
105.3 |
O4 |
C1 |
H1 |
118.0 |
110.4 |
C1 |
C2 |
C3 |
103.7 |
104.1 |
C1 |
C2 |
O2 |
108.8 |
110.5 |
C2 |
C1 |
H1 |
104.3 |
110.4 |
C1 |
C2 |
H2 |
113.5 |
110.5 |
O4 |
C4 |
C5 |
108.9 |
110.4 |
O4 |
C4 |
C3 |
104.3 |
104.8 |
O4 |
C4 |
H4 |
113.0 |
110.4 |
C5 |
C4 |
C3 |
108.9 |
110.4 |
C4 |
C5 |
O5 |
111.1 |
109.5 |
C5 |
C4 |
H4 |
108.7 |
110.3 |
C4 |
C5 |
H5 |
108.9 |
109.5 |
C4 |
C5 |
H5A |
108.6 |
109.5 |
C4 |
C3 |
O3 |
110.0 |
110.5 |
C4 |
C3 |
C2 |
102.4 |
104.1 |
C3 |
C4 |
H4 |
113.0 |
110.5 |
C4 |
C3 |
H3 |
114.2 |
110.5 |
O5 |
C5 |
H5 |
109.0 |
109.5 |
O5 |
C5 |
H5A |
108.6 |
109.4 |
C5 |
O5 |
HO5 |
109.5 |
114.0 |
O3 |
C3 |
C2 |
111.0 |
110.5 |
O3 |
C3 |
H3 |
106.1 |
110.5 |
C3 |
O3 |
HO3 |
109.5 |
114.0 |
C3 |
C2 |
O2 |
109.4 |
110.5 |
C2 |
C3 |
H3 |
113.2 |
110.7 |
C3 |
C2 |
H2 |
113.0 |
110.5 |
O2 |
C2 |
H2 |
108.2 |
110.6 |
C2 |
O2 |
HO2 |
109.5 |
114.0 |
HN2 |
N2 |
HN2A |
125.0 |
119.9 |
H5 |
C5 |
H5A |
110.7 |
109.5 |
Torsion Angles for F01
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
N1 |
C6 |
O1 |
N3 |
179.9 |
180.2 |
O1 |
C6 |
N1 |
C7 |
180.4 |
180.0 |
O1 |
C6 |
N3 |
C9 |
179.9 |
179.7 |
O1 |
C6 |
N3 |
C1 |
358.7 |
360.0 |
O1 |
C6 |
N1 |
N3 |
180.1 |
179.8 |
N1 |
C6 |
N3 |
C9 |
0.1 |
359.4 |
N1 |
C6 |
N3 |
C1 |
178.8 |
179.7 |
C6 |
N1 |
C7 |
N2 |
180.0 |
180.0 |
C6 |
N1 |
C7 |
C8 |
359.7 |
360.0 |
O1 |
C6 |
N3 |
N1 |
179.9 |
180.2 |
N3 |
C6 |
N1 |
C7 |
0.3 |
0.3 |
C8 |
C9 |
N3 |
C6 |
359.6 |
0.6 |
C9 |
N3 |
C6 |
C1 |
181.2 |
179.7 |
C6 |
N3 |
C9 |
H9 |
179.6 |
180.3 |
C6 |
N3 |
C1 |
O4 |
226.0 |
53.5 |
C6 |
N3 |
C1 |
C2 |
109.3 |
298.1 |
C6 |
N3 |
C1 |
H1 |
351.8 |
175.8 |
C7 |
N1 |
C6 |
N3 |
0.3 |
0.3 |
N2 |
C7 |
N1 |
C8 |
180.2 |
180.0 |
N1 |
C7 |
N2 |
HN2 |
180.0 |
0.0 |
N1 |
C7 |
N2 |
HN2A |
360.0 |
180.0 |
N1 |
C7 |
C8 |
F1 |
179.5 |
180.0 |
N1 |
C7 |
C8 |
C9 |
359.9 |
0.0 |
N1 |
C7 |
N2 |
C8 |
179.8 |
180.0 |
N2 |
C7 |
C8 |
F1 |
359.3 |
360.0 |
N2 |
C7 |
C8 |
C9 |
179.7 |
180.0 |
HN2 |
N2 |
C7 |
HN2A |
180.0 |
180.0 |
N1 |
C7 |
C8 |
N2 |
180.2 |
180.0 |
C8 |
C7 |
N2 |
HN2 |
0.2 |
180.0 |
C8 |
C7 |
N2 |
HN2A |
180.2 |
0.0 |
F1 |
C8 |
C7 |
C9 |
179.6 |
179.9 |
C7 |
C8 |
C9 |
N3 |
0.4 |
359.7 |
C7 |
C8 |
C9 |
H9 |
180.4 |
180.0 |
C7 |
C8 |
F1 |
C9 |
180.4 |
180.1 |
F1 |
C8 |
C9 |
N3 |
180.8 |
179.7 |
F1 |
C8 |
C9 |
H9 |
0.8 |
0.0 |
C6 |
N3 |
C9 |
C8 |
359.6 |
0.6 |
C7 |
C8 |
C9 |
F1 |
179.6 |
179.9 |
C8 |
C9 |
N3 |
C1 |
180.8 |
180.3 |
N3 |
C9 |
C8 |
H9 |
180.0 |
179.7 |
C6 |
N3 |
C9 |
C1 |
178.8 |
180.3 |
C8 |
C9 |
N3 |
H9 |
180.0 |
180.3 |
C9 |
N3 |
C1 |
O4 |
44.8 |
233.8 |
C9 |
N3 |
C1 |
C2 |
288.1 |
118.4 |
C9 |
N3 |
C1 |
H1 |
170.5 |
356.1 |
C6 |
N3 |
C1 |
C9 |
181.3 |
179.7 |
C1 |
N3 |
C9 |
H9 |
0.8 |
360.0 |
O4 |
C1 |
N3 |
C2 |
116.7 |
115.4 |
N3 |
C1 |
O4 |
C4 |
223.3 |
200.7 |
O4 |
C1 |
N3 |
H1 |
234.3 |
237.7 |
N3 |
C1 |
C2 |
C3 |
103.0 |
142.8 |
N3 |
C1 |
C2 |
O2 |
219.4 |
261.5 |
C2 |
C1 |
N3 |
H1 |
117.6 |
122.3 |
N3 |
C1 |
C2 |
H2 |
340.0 |
24.2 |
N3 |
C1 |
O4 |
C2 |
236.8 |
241.2 |
N3 |
C1 |
O4 |
H1 |
119.6 |
122.3 |
O4 |
C1 |
C2 |
C3 |
349.0 |
24.0 |
O4 |
C1 |
C2 |
O2 |
105.4 |
142.6 |
C2 |
C1 |
O4 |
H1 |
242.8 |
241.1 |
O4 |
C1 |
C2 |
H2 |
226.0 |
265.4 |
C1 |
O4 |
C4 |
C5 |
148.7 |
159.4 |
C1 |
O4 |
C4 |
C3 |
32.6 |
40.5 |
C1 |
O4 |
C4 |
H4 |
269.5 |
281.6 |
N3 |
C1 |
C2 |
O4 |
114.0 |
118.8 |
N3 |
C1 |
C2 |
H1 |
239.9 |
237.8 |
C2 |
C1 |
O4 |
C4 |
346.5 |
319.5 |
O4 |
C1 |
C2 |
H1 |
125.9 |
118.9 |
C4 |
C3 |
C2 |
C1 |
29.5 |
0.0 |
O3 |
C3 |
C2 |
C1 |
146.9 |
118.6 |
C3 |
C2 |
C1 |
O2 |
243.6 |
241.3 |
C1 |
C2 |
C3 |
H3 |
266.1 |
241.3 |
C3 |
C2 |
C1 |
H2 |
123.0 |
118.6 |
O2 |
C2 |
C1 |
H2 |
239.4 |
237.3 |
C1 |
C2 |
O2 |
HO2 |
340.8 |
180.0 |
C4 |
O4 |
C1 |
C2 |
346.5 |
319.5 |
C4 |
O4 |
C1 |
H1 |
103.7 |
78.4 |
C5 |
C4 |
O4 |
C3 |
116.1 |
118.8 |
O4 |
C4 |
C5 |
O5 |
296.3 |
66.5 |
C5 |
C4 |
O4 |
H4 |
239.1 |
237.8 |
O4 |
C4 |
C5 |
H5 |
56.3 |
186.5 |
O4 |
C4 |
C5 |
H5A |
177.0 |
306.5 |
O4 |
C4 |
C3 |
O3 |
203.4 |
217.4 |
O4 |
C4 |
C3 |
C2 |
321.5 |
336.0 |
C3 |
C4 |
O4 |
H4 |
123.0 |
118.9 |
O4 |
C4 |
C3 |
H3 |
84.3 |
94.8 |
O4 |
C4 |
C5 |
C3 |
246.9 |
244.6 |
O4 |
C4 |
C5 |
H4 |
123.5 |
122.3 |
C5 |
C4 |
C3 |
O3 |
87.3 |
98.6 |
C5 |
C4 |
C3 |
C2 |
205.4 |
217.2 |
C3 |
C4 |
C5 |
H4 |
236.6 |
237.6 |
C5 |
C4 |
C3 |
H3 |
328.2 |
336.0 |
O5 |
C5 |
C4 |
H5 |
240.0 |
240.0 |
O5 |
C5 |
C4 |
H5A |
119.3 |
120.0 |
C4 |
C5 |
O5 |
HO5 |
288.9 |
180.0 |
H5 |
C5 |
C4 |
H5A |
239.4 |
240.0 |
C1 |
C2 |
C3 |
C4 |
29.5 |
0.0 |
O4 |
C4 |
C3 |
C5 |
116.1 |
118.8 |
O4 |
C4 |
C3 |
H4 |
236.9 |
241.1 |
C3 |
C4 |
C5 |
O5 |
49.4 |
181.8 |
C5 |
C4 |
C3 |
H4 |
120.8 |
122.3 |
C3 |
C4 |
C5 |
H5 |
169.4 |
301.8 |
C3 |
C4 |
C5 |
H5A |
290.1 |
61.9 |
O3 |
C3 |
C4 |
C2 |
241.9 |
241.4 |
O3 |
C3 |
C4 |
H3 |
119.1 |
122.5 |
C4 |
C3 |
O3 |
HO3 |
28.9 |
298.6 |
C4 |
C3 |
C2 |
O2 |
273.6 |
241.4 |
C2 |
C3 |
C4 |
H3 |
237.2 |
241.2 |
C4 |
C3 |
C2 |
H2 |
152.9 |
118.6 |
O5 |
C5 |
C4 |
C3 |
49.4 |
181.8 |
O5 |
C5 |
C4 |
H4 |
172.8 |
304.2 |
C4 |
C5 |
O5 |
H5 |
120.0 |
120.0 |
C4 |
C5 |
O5 |
H5A |
240.7 |
240.0 |
H5 |
C5 |
O5 |
H5A |
120.7 |
120.0 |
C1 |
C2 |
C3 |
O3 |
146.9 |
118.6 |
C4 |
C3 |
O3 |
C2 |
112.7 |
114.6 |
O3 |
C3 |
C4 |
H4 |
326.5 |
336.3 |
C4 |
C3 |
O3 |
H3 |
236.1 |
237.4 |
O3 |
C3 |
C2 |
O2 |
31.0 |
360.0 |
C2 |
C3 |
O3 |
H3 |
123.4 |
122.8 |
O3 |
C3 |
C2 |
H2 |
270.3 |
237.3 |
C1 |
C2 |
C3 |
O2 |
116.0 |
118.6 |
C3 |
C2 |
C1 |
H1 |
223.1 |
265.1 |
C1 |
C2 |
C3 |
H2 |
236.7 |
241.4 |
C4 |
C3 |
C2 |
O3 |
242.6 |
241.4 |
C2 |
C3 |
C4 |
H4 |
84.6 |
94.9 |
C4 |
C3 |
C2 |
H3 |
123.4 |
118.7 |
O3 |
C3 |
C2 |
H3 |
240.8 |
237.3 |
C2 |
C3 |
O3 |
HO3 |
276.2 |
184.0 |
O2 |
C2 |
C3 |
H2 |
120.7 |
122.7 |
C3 |
C2 |
O2 |
HO2 |
93.4 |
294.7 |
C1 |
C2 |
O2 |
C3 |
247.3 |
245.4 |
O2 |
C2 |
C1 |
H1 |
339.5 |
23.7 |
C1 |
C2 |
O2 |
H2 |
123.8 |
122.7 |
O2 |
C2 |
C3 |
H3 |
150.1 |
122.7 |
C3 |
C2 |
O2 |
H2 |
236.5 |
237.3 |
HN2 |
N2 |
C7 |
C8 |
0.2 |
180.0 |
C7 |
N2 |
HN2 |
HN2A |
180.0 |
180.0 |
HN2A |
N2 |
C7 |
C8 |
180.2 |
0.0 |
C7 |
N2 |
HN2A |
HN2 |
180.0 |
180.0 |
C8 |
C9 |
H9 |
N3 |
180.0 |
179.7 |
H9 |
C9 |
N3 |
C1 |
0.8 |
360.0 |
N3 |
C1 |
H1 |
O4 |
243.9 |
237.7 |
N3 |
C1 |
H1 |
C2 |
125.1 |
122.2 |
O4 |
C1 |
H1 |
C2 |
241.2 |
244.6 |
H1 |
C1 |
O4 |
C4 |
103.7 |
78.4 |
H1 |
C1 |
C2 |
C3 |
223.1 |
265.1 |
H1 |
C1 |
C2 |
O2 |
339.5 |
23.7 |
H1 |
C1 |
C2 |
H2 |
100.1 |
146.4 |
O4 |
C4 |
H4 |
C5 |
239.0 |
237.7 |
O4 |
C4 |
H4 |
C3 |
118.1 |
115.4 |
C5 |
C4 |
H4 |
C3 |
239.0 |
237.7 |
H4 |
C4 |
C5 |
O5 |
172.8 |
304.2 |
H4 |
C4 |
C5 |
H5 |
292.8 |
64.2 |
H4 |
C4 |
C5 |
H5A |
53.5 |
184.3 |
H4 |
C4 |
C3 |
O3 |
326.5 |
336.3 |
H4 |
C4 |
C3 |
C2 |
84.6 |
94.9 |
H4 |
C4 |
C3 |
H3 |
207.4 |
213.7 |
H5 |
C5 |
C4 |
C3 |
169.4 |
301.8 |
C4 |
C5 |
H5 |
O5 |
238.7 |
240.0 |
H5 |
C5 |
C4 |
H4 |
292.8 |
64.2 |
C4 |
C5 |
H5 |
H5A |
119.3 |
120.0 |
O5 |
C5 |
H5 |
H5A |
240.6 |
240.1 |
H5 |
C5 |
O5 |
HO5 |
168.9 |
60.0 |
H5A |
C5 |
C4 |
C3 |
290.1 |
61.9 |
C4 |
C5 |
H5A |
O5 |
120.9 |
120.0 |
H5A |
C5 |
C4 |
H4 |
53.5 |
184.3 |
C4 |
C5 |
H5A |
H5 |
240.5 |
239.9 |
O5 |
C5 |
H5A |
H5 |
119.6 |
120.0 |
H5A |
C5 |
O5 |
HO5 |
48.3 |
300.0 |
HO5 |
O5 |
C5 |
H5 |
168.9 |
60.0 |
HO5 |
O5 |
C5 |
H5A |
48.3 |
300.0 |
C4 |
C3 |
H3 |
O3 |
121.3 |
122.6 |
C4 |
C3 |
H3 |
C2 |
243.3 |
245.3 |
H3 |
C3 |
C4 |
H4 |
207.4 |
213.7 |
O3 |
C3 |
H3 |
C2 |
122.0 |
122.7 |
H3 |
C3 |
O3 |
HO3 |
152.8 |
61.2 |
H3 |
C3 |
C2 |
O2 |
150.1 |
122.7 |
H3 |
C3 |
C2 |
H2 |
29.5 |
359.9 |
HO3 |
O3 |
C3 |
C2 |
276.2 |
184.0 |
HO3 |
O3 |
C3 |
H3 |
152.8 |
61.2 |
C1 |
C2 |
H2 |
C3 |
117.7 |
114.6 |
C1 |
C2 |
H2 |
O2 |
239.1 |
237.3 |
H2 |
C2 |
C1 |
H1 |
100.1 |
146.4 |
C3 |
C2 |
H2 |
O2 |
121.3 |
122.7 |
H2 |
C2 |
C3 |
H3 |
29.5 |
359.9 |
H2 |
C2 |
O2 |
HO2 |
217.0 |
57.3 |
HO2 |
O2 |
C2 |
H2 |
217.0 |
57.3 |