PDB Chemical Component EZL
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for EZL
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N1 |
S1 |
1.595 |
1.657 |
C2 |
C3 |
1.425 |
1.398 |
C2 |
N2 |
1.388 |
1.348 |
C2 |
C7 |
1.437 |
1.412 |
C3 |
C4 |
1.405 |
1.394 |
C3 |
S2 |
1.720 |
1.762 |
C4 |
C5 |
1.420 |
1.381 |
C5 |
C6 |
1.420 |
1.393 |
C5 |
O3 |
1.389 |
1.359 |
C8 |
O3 |
1.454 |
1.429 |
C8 |
C9 |
1.483 |
1.529 |
O1 |
S1 |
1.445 |
1.421 |
O2 |
S1 |
1.440 |
1.420 |
S1 |
C1 |
1.786 |
1.762 |
C1 |
N2 |
1.298 |
1.279 |
C1 |
S2 |
1.729 |
1.758 |
C6 |
C7 |
1.407 |
1.360 |
N1 |
HN1 |
1.000 |
0.970 |
N1 |
HN1A |
1.000 |
0.970 |
C4 |
H4 |
1.080 |
1.080 |
C8 |
H8 |
1.100 |
1.090 |
C8 |
H8A |
1.100 |
1.091 |
C6 |
H6 |
1.080 |
1.080 |
C7 |
H7 |
1.080 |
1.080 |
C9 |
H9 |
1.100 |
1.090 |
C9 |
H9A |
1.100 |
1.091 |
C9 |
H9B |
1.100 |
1.090 |
Bond Angles for EZL
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
N1 |
S1 |
O1 |
109.4 |
106.4 |
N1 |
S1 |
O2 |
108.6 |
106.4 |
N1 |
S1 |
C1 |
108.4 |
107.2 |
S1 |
N1 |
HN1 |
109.5 |
120.0 |
S1 |
N1 |
HN1A |
109.5 |
119.9 |
C3 |
C2 |
N2 |
115.6 |
112.8 |
C3 |
C2 |
C7 |
119.4 |
118.4 |
C2 |
C3 |
C4 |
121.8 |
120.4 |
C2 |
C3 |
S2 |
109.0 |
108.3 |
N2 |
C2 |
C7 |
125.0 |
128.8 |
C2 |
N2 |
C1 |
108.2 |
118.1 |
C2 |
C7 |
C6 |
118.4 |
120.6 |
C2 |
C7 |
H7 |
120.8 |
119.7 |
C4 |
C3 |
S2 |
129.2 |
131.3 |
C3 |
C4 |
C5 |
118.7 |
120.0 |
C3 |
C4 |
H4 |
120.6 |
120.0 |
C3 |
S2 |
C1 |
88.6 |
90.4 |
C4 |
C5 |
C6 |
120.0 |
119.9 |
C4 |
C5 |
O3 |
118.7 |
120.1 |
C5 |
C4 |
H4 |
120.7 |
120.0 |
C6 |
C5 |
O3 |
121.3 |
120.0 |
C5 |
C6 |
C7 |
121.7 |
120.7 |
C5 |
C6 |
H6 |
119.1 |
119.6 |
C5 |
O3 |
C8 |
118.7 |
117.0 |
O3 |
C8 |
C9 |
107.9 |
109.5 |
O3 |
C8 |
H8 |
110.0 |
109.5 |
O3 |
C8 |
H8A |
110.3 |
109.5 |
C9 |
C8 |
H8 |
110.0 |
109.5 |
C9 |
C8 |
H8A |
110.4 |
109.4 |
C8 |
C9 |
H9 |
109.5 |
109.5 |
C8 |
C9 |
H9A |
109.5 |
109.5 |
C8 |
C9 |
H9B |
109.5 |
109.5 |
O1 |
S1 |
O2 |
119.2 |
123.1 |
O1 |
S1 |
C1 |
105.8 |
106.4 |
O2 |
S1 |
C1 |
104.8 |
106.5 |
S1 |
C1 |
N2 |
122.6 |
124.8 |
S1 |
C1 |
S2 |
118.8 |
124.7 |
N2 |
C1 |
S2 |
118.6 |
110.5 |
C7 |
C6 |
H6 |
119.1 |
119.7 |
C6 |
C7 |
H7 |
120.8 |
119.7 |
HN1 |
N1 |
HN1A |
109.5 |
120.1 |
H8 |
C8 |
H8A |
108.3 |
109.4 |
H9 |
C9 |
H9A |
109.4 |
109.4 |
H9 |
C9 |
H9B |
109.4 |
109.5 |
H9A |
C9 |
H9B |
109.5 |
109.4 |
Torsion Angles for EZL
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
S1 |
N1 |
O2 |
228.3 |
227.1 |
O1 |
S1 |
N1 |
C1 |
115.0 |
113.5 |
O2 |
S1 |
N1 |
C1 |
246.7 |
246.4 |
N1 |
S1 |
C1 |
N2 |
303.2 |
90.0 |
N1 |
S1 |
C1 |
S2 |
123.9 |
269.9 |
HN1 |
N1 |
S1 |
HN1A |
240.0 |
180.4 |
N2 |
C2 |
C3 |
C7 |
179.5 |
180.3 |
C3 |
C2 |
N2 |
C1 |
0.1 |
360.0 |
C3 |
C2 |
C7 |
C6 |
359.9 |
0.5 |
C3 |
C2 |
C7 |
H7 |
179.9 |
180.0 |
C4 |
C3 |
C2 |
S2 |
180.0 |
180.0 |
C2 |
C3 |
C4 |
C5 |
359.6 |
0.0 |
C2 |
C3 |
C4 |
H4 |
179.6 |
180.0 |
C2 |
C3 |
S2 |
C1 |
0.3 |
360.0 |
C3 |
C2 |
N2 |
C7 |
180.5 |
179.7 |
N2 |
C2 |
C3 |
C4 |
179.7 |
180.0 |
N2 |
C2 |
C3 |
S2 |
359.7 |
0.0 |
N2 |
C2 |
C7 |
C6 |
180.4 |
180.1 |
N2 |
C2 |
C7 |
H7 |
0.4 |
359.7 |
S1 |
C1 |
N2 |
C2 |
180.8 |
179.9 |
C2 |
N2 |
C1 |
S2 |
0.2 |
0.0 |
C3 |
C2 |
C7 |
N2 |
179.5 |
180.3 |
C7 |
C2 |
C3 |
C4 |
0.2 |
359.7 |
C7 |
C2 |
C3 |
S2 |
180.2 |
179.8 |
C7 |
C2 |
N2 |
C1 |
179.6 |
180.3 |
C5 |
C6 |
C7 |
C2 |
0.3 |
359.6 |
C2 |
C7 |
C6 |
H6 |
180.3 |
179.7 |
C6 |
C7 |
C2 |
H7 |
180.0 |
180.4 |
C4 |
C3 |
C2 |
N2 |
179.7 |
180.0 |
C4 |
C3 |
C2 |
C7 |
0.2 |
359.7 |
C2 |
C3 |
C4 |
S2 |
180.0 |
180.0 |
C4 |
C3 |
S2 |
C1 |
180.3 |
180.0 |
C3 |
C4 |
C5 |
C6 |
0.5 |
0.0 |
C3 |
C4 |
C5 |
O3 |
180.4 |
180.0 |
C5 |
C4 |
C3 |
H4 |
180.0 |
180.0 |
S2 |
C3 |
C2 |
N2 |
359.7 |
0.0 |
S2 |
C3 |
C2 |
C7 |
180.2 |
179.8 |
C2 |
C3 |
S2 |
C4 |
180.0 |
180.0 |
S2 |
C3 |
C4 |
C5 |
179.7 |
180.0 |
S2 |
C3 |
C4 |
H4 |
359.6 |
360.0 |
S1 |
C1 |
S2 |
C3 |
179.1 |
180.1 |
N2 |
C1 |
S2 |
C3 |
359.7 |
0.0 |
C5 |
C4 |
C3 |
S2 |
179.7 |
180.0 |
C3 |
C4 |
C5 |
H4 |
180.0 |
180.0 |
C6 |
C5 |
C4 |
O3 |
180.2 |
180.1 |
C4 |
C5 |
C6 |
C7 |
359.5 |
0.2 |
C4 |
C5 |
C6 |
H6 |
179.5 |
180.0 |
C4 |
C5 |
O3 |
C8 |
179.8 |
180.0 |
C2 |
C7 |
C6 |
C5 |
0.3 |
359.6 |
C4 |
C5 |
C6 |
O3 |
179.8 |
179.9 |
C6 |
C5 |
C4 |
H4 |
180.6 |
180.0 |
C6 |
C5 |
O3 |
C8 |
359.7 |
359.9 |
C7 |
C6 |
C5 |
H6 |
180.0 |
180.2 |
C5 |
C6 |
C7 |
H7 |
180.3 |
180.0 |
C4 |
C5 |
O3 |
C6 |
180.2 |
180.1 |
O3 |
C5 |
C4 |
H4 |
0.4 |
360.0 |
O3 |
C5 |
C6 |
C7 |
179.7 |
180.2 |
O3 |
C5 |
C6 |
H6 |
359.7 |
0.1 |
C5 |
O3 |
C8 |
C9 |
244.5 |
180.0 |
C5 |
O3 |
C8 |
H8 |
4.5 |
300.1 |
C5 |
O3 |
C8 |
H8A |
123.9 |
60.0 |
C9 |
C8 |
O3 |
H8 |
240.0 |
239.9 |
C9 |
C8 |
O3 |
H8A |
120.6 |
120.0 |
O3 |
C8 |
C9 |
H9 |
68.9 |
180.0 |
O3 |
C8 |
C9 |
H9A |
188.8 |
300.0 |
O3 |
C8 |
C9 |
H9B |
308.9 |
60.0 |
H8 |
C8 |
O3 |
H8A |
240.6 |
240.0 |
O3 |
C8 |
C9 |
H8 |
120.0 |
120.1 |
O3 |
C8 |
C9 |
H8A |
239.4 |
240.0 |
H8 |
C8 |
C9 |
H8A |
119.4 |
119.9 |
H9 |
C9 |
C8 |
H9A |
240.0 |
240.0 |
H9 |
C9 |
C8 |
H9B |
120.0 |
120.1 |
H9A |
C9 |
C8 |
H9B |
239.9 |
240.0 |
N1 |
S1 |
O1 |
O2 |
125.8 |
122.9 |
N1 |
S1 |
O1 |
C1 |
243.4 |
245.9 |
O1 |
S1 |
N1 |
HN1 |
78.0 |
113.6 |
O1 |
S1 |
N1 |
HN1A |
198.0 |
293.2 |
O2 |
S1 |
O1 |
C1 |
117.5 |
123.0 |
O1 |
S1 |
C1 |
N2 |
185.9 |
336.5 |
O1 |
S1 |
C1 |
S2 |
6.6 |
156.4 |
N1 |
S1 |
O2 |
O1 |
233.8 |
237.1 |
N1 |
S1 |
O2 |
C1 |
115.7 |
114.1 |
O2 |
S1 |
N1 |
HN1 |
209.7 |
246.5 |
O2 |
S1 |
N1 |
HN1A |
329.7 |
66.1 |
O1 |
S1 |
O2 |
C1 |
241.9 |
237.0 |
O2 |
S1 |
C1 |
N2 |
59.1 |
203.6 |
O2 |
S1 |
C1 |
S2 |
239.8 |
23.5 |
N1 |
S1 |
C1 |
O1 |
117.3 |
113.5 |
N1 |
S1 |
C1 |
O2 |
244.1 |
246.4 |
C1 |
S1 |
N1 |
HN1 |
323.0 |
0.1 |
C1 |
S1 |
N1 |
HN1A |
83.0 |
179.7 |
C2 |
N2 |
C1 |
S1 |
180.8 |
179.9 |
C3 |
S2 |
C1 |
S1 |
179.1 |
180.1 |
O1 |
S1 |
C1 |
O2 |
126.8 |
132.9 |
N2 |
C1 |
S1 |
S2 |
179.3 |
180.1 |
C1 |
N2 |
C2 |
C7 |
179.6 |
180.3 |
C3 |
S2 |
C1 |
N2 |
359.7 |
0.0 |
S1 |
C1 |
N2 |
S2 |
180.7 |
179.9 |
S1 |
C1 |
S2 |
N2 |
179.4 |
180.1 |
C2 |
C7 |
C6 |
H7 |
180.0 |
179.6 |
C7 |
C6 |
C5 |
O3 |
179.7 |
180.2 |
C5 |
C6 |
C7 |
H6 |
180.0 |
179.8 |
HN1 |
N1 |
S1 |
O1 |
78.0 |
113.6 |
HN1 |
N1 |
S1 |
O2 |
209.7 |
246.5 |
HN1 |
N1 |
S1 |
C1 |
323.0 |
0.1 |
S1 |
N1 |
HN1 |
HN1A |
120.0 |
179.6 |
HN1A |
N1 |
S1 |
O1 |
198.0 |
293.2 |
HN1A |
N1 |
S1 |
O2 |
329.7 |
66.1 |
HN1A |
N1 |
S1 |
C1 |
83.0 |
179.7 |
S1 |
N1 |
HN1A |
HN1 |
240.0 |
180.4 |
H4 |
C4 |
C3 |
S2 |
359.6 |
360.0 |
C3 |
C4 |
H4 |
C5 |
180.0 |
180.0 |
H4 |
C4 |
C5 |
C6 |
180.6 |
180.0 |
H4 |
C4 |
C5 |
O3 |
0.4 |
360.0 |
O3 |
C8 |
H8 |
C9 |
241.3 |
239.9 |
O3 |
C8 |
H8 |
H8A |
120.6 |
120.0 |
C9 |
C8 |
H8 |
H8A |
239.4 |
240.0 |
H8 |
C8 |
C9 |
H9 |
308.8 |
60.0 |
H8 |
C8 |
C9 |
H9A |
68.8 |
180.0 |
H8 |
C8 |
C9 |
H9B |
188.9 |
299.9 |
O3 |
C8 |
H8A |
C9 |
119.2 |
120.0 |
O3 |
C8 |
H8A |
H8 |
239.6 |
240.0 |
C9 |
C8 |
H8A |
H8 |
120.4 |
120.0 |
H8A |
C8 |
C9 |
H9 |
189.5 |
300.0 |
H8A |
C8 |
C9 |
H9A |
309.4 |
60.0 |
H8A |
C8 |
C9 |
H9B |
69.5 |
180.0 |
H6 |
C6 |
C5 |
O3 |
359.7 |
0.1 |
C5 |
C6 |
H6 |
C7 |
180.0 |
180.2 |
H6 |
C6 |
C7 |
H7 |
0.3 |
0.2 |
C2 |
C7 |
H7 |
C6 |
180.0 |
180.4 |
H7 |
C7 |
C6 |
H6 |
0.3 |
0.2 |
H9 |
C9 |
C8 |
H8 |
308.8 |
60.0 |
H9 |
C9 |
C8 |
H8A |
189.5 |
300.0 |
C8 |
C9 |
H9 |
H9A |
120.0 |
120.0 |
C8 |
C9 |
H9 |
H9B |
240.0 |
239.9 |
H9A |
C9 |
H9 |
H9B |
120.0 |
119.9 |
H9A |
C9 |
C8 |
H8 |
68.8 |
180.0 |
H9A |
C9 |
C8 |
H8A |
309.4 |
60.0 |
C8 |
C9 |
H9A |
H9 |
240.0 |
239.9 |
C8 |
C9 |
H9A |
H9B |
120.0 |
120.0 |
H9 |
C9 |
H9A |
H9B |
240.1 |
240.1 |
H9B |
C9 |
C8 |
H8 |
188.9 |
299.9 |
H9B |
C9 |
C8 |
H8A |
69.5 |
180.0 |
C8 |
C9 |
H9B |
H9 |
120.0 |
120.1 |
C8 |
C9 |
H9B |
H9A |
240.0 |
240.0 |
H9 |
C9 |
H9B |
H9A |
120.0 |
119.9 |