PDB Chemical Component EVK
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for EVK
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C3 |
C2 |
1.528 |
1.531 |
| C1 |
C2 |
1.518 |
1.529 |
| C2 |
N4 |
1.452 |
1.465 |
| N4 |
C5 |
1.355 |
1.392 |
| O18 |
C17 |
1.425 |
1.429 |
| C9 |
N10 |
1.351 |
1.349 |
| C9 |
C8 |
1.392 |
1.377 |
| C5 |
C6 |
1.401 |
1.388 |
| C5 |
N29 |
1.344 |
1.325 |
| N10 |
C11 |
1.371 |
1.376 |
| C6 |
C7 |
1.380 |
1.395 |
| N29 |
C28 |
1.330 |
1.320 |
| C8 |
C7 |
1.484 |
1.483 |
| C8 |
C12 |
1.407 |
1.409 |
| C7 |
C26 |
1.396 |
1.401 |
| C17 |
C16 |
1.523 |
1.530 |
| C28 |
C26 |
1.382 |
1.380 |
| C11 |
C12 |
1.380 |
1.366 |
| C11 |
C13 |
1.465 |
1.468 |
| C26 |
CL2 |
1.722 |
1.735 |
| N15 |
C13 |
1.350 |
1.348 |
| N15 |
C16 |
1.459 |
1.465 |
| C13 |
O14 |
1.230 |
1.216 |
| C16 |
C19 |
1.525 |
1.506 |
| C19 |
C25 |
1.386 |
1.381 |
| C19 |
C20 |
1.393 |
1.383 |
| C25 |
C23 |
1.382 |
1.385 |
| C20 |
C21 |
1.395 |
1.382 |
| C23 |
C22 |
1.369 |
1.383 |
| C23 |
CL1 |
1.737 |
1.735 |
| C21 |
C22 |
1.371 |
1.382 |
| C1 |
H33 |
1.100 |
1.090 |
| C1 |
H34 |
1.101 |
1.091 |
| C1 |
H32 |
1.100 |
1.090 |
| C2 |
H35 |
1.100 |
1.090 |
| C3 |
H36 |
1.100 |
1.091 |
| C3 |
H37 |
1.100 |
1.091 |
| C3 |
H38 |
1.100 |
1.089 |
| N4 |
H39 |
1.000 |
0.970 |
| C6 |
H40 |
1.080 |
1.080 |
| C12 |
H42 |
1.081 |
1.080 |
| C16 |
H31 |
1.100 |
1.090 |
| C21 |
H48 |
1.080 |
1.080 |
| C22 |
H49 |
1.080 |
1.080 |
| C25 |
H50 |
1.080 |
1.080 |
| C28 |
H51 |
1.081 |
1.079 |
| C9 |
H41 |
1.080 |
1.079 |
| N10 |
H30 |
1.000 |
0.970 |
| N15 |
H43 |
1.000 |
0.970 |
| C17 |
H45 |
1.099 |
1.090 |
| C17 |
H44 |
1.100 |
1.089 |
| O18 |
H46 |
0.950 |
0.966 |
| C20 |
H47 |
1.080 |
1.080 |
Bond Angles for EVK
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C3 |
C2 |
N4 |
109.3 |
109.4 |
| C3 |
C2 |
H35 |
108.3 |
109.5 |
| C1 |
C2 |
N4 |
109.6 |
109.5 |
| C2 |
C1 |
H33 |
109.5 |
109.5 |
| C2 |
C1 |
H34 |
109.5 |
109.5 |
| C2 |
C1 |
H32 |
109.5 |
109.5 |
| C1 |
C2 |
H35 |
108.4 |
109.5 |
| C2 |
N4 |
C5 |
125.6 |
120.0 |
| N4 |
C2 |
H35 |
109.3 |
109.5 |
| C2 |
N4 |
H39 |
105.3 |
120.0 |
| N4 |
C5 |
C6 |
121.9 |
119.6 |
| N4 |
C5 |
N29 |
115.6 |
119.6 |
| C5 |
N4 |
H39 |
105.3 |
120.0 |
| O18 |
C17 |
H45 |
109.2 |
109.5 |
| O18 |
C17 |
H44 |
109.2 |
109.5 |
| N10 |
C9 |
H41 |
125.8 |
125.8 |
| C9 |
N10 |
H30 |
125.0 |
125.4 |
| C6 |
C5 |
N29 |
122.5 |
120.7 |
| C5 |
C6 |
C7 |
119.7 |
119.0 |
| C5 |
C6 |
H40 |
120.1 |
120.5 |
| C5 |
N29 |
C28 |
117.9 |
121.9 |
| C6 |
C7 |
C26 |
116.6 |
118.2 |
| C7 |
C6 |
H40 |
120.1 |
120.5 |
| N29 |
C28 |
H51 |
118.7 |
119.6 |
| C8 |
C7 |
C26 |
125.5 |
120.9 |
| C8 |
C12 |
C11 |
108.2 |
107.1 |
| C8 |
C12 |
H42 |
125.9 |
126.5 |
| C7 |
C26 |
CL2 |
121.6 |
120.4 |
| C17 |
C16 |
H31 |
107.7 |
109.5 |
| C28 |
C26 |
CL2 |
117.8 |
120.4 |
| C12 |
C11 |
C13 |
134.0 |
125.9 |
| C11 |
C12 |
H42 |
125.9 |
126.5 |
| C11 |
C13 |
O14 |
121.3 |
120.0 |
| N15 |
C16 |
H31 |
108.5 |
109.5 |
| C16 |
C19 |
C25 |
119.4 |
120.0 |
| C16 |
C19 |
C20 |
122.2 |
120.0 |
| C19 |
C16 |
H31 |
107.7 |
109.5 |
| C25 |
C19 |
C20 |
118.5 |
120.0 |
| C19 |
C25 |
C23 |
120.0 |
120.0 |
| C19 |
C25 |
H50 |
120.0 |
120.0 |
| C19 |
C20 |
C21 |
120.8 |
120.0 |
| C19 |
C20 |
H47 |
119.6 |
120.0 |
| C25 |
C23 |
CL1 |
119.3 |
120.0 |
| C20 |
C21 |
H48 |
120.2 |
120.0 |
| C23 |
C22 |
H49 |
120.1 |
119.9 |
| C22 |
C21 |
H48 |
120.2 |
120.0 |
| C21 |
C22 |
H49 |
120.1 |
120.0 |
| H33 |
C1 |
H34 |
109.4 |
109.5 |
| H33 |
C1 |
H32 |
109.5 |
109.5 |
| H34 |
C1 |
H32 |
109.5 |
109.4 |
| H36 |
C3 |
H37 |
109.4 |
109.5 |
| H36 |
C3 |
H38 |
109.5 |
109.5 |
| H37 |
C3 |
H38 |
109.5 |
109.5 |
| H45 |
C17 |
H44 |
109.5 |
109.5 |
Torsion Angles for EVK
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C1 |
C2 |
C3 |
N4 |
121.6 |
120.0 |
| C3 |
C2 |
C1 |
H33 |
180.0 |
300.0 |
| C3 |
C2 |
C1 |
H34 |
300.0 |
60.0 |
| C3 |
C2 |
C1 |
H32 |
60.0 |
180.0 |
| C1 |
C2 |
C3 |
H35 |
240.5 |
239.9 |
| C3 |
C2 |
N4 |
C5 |
286.2 |
275.0 |
| N4 |
C2 |
C3 |
H35 |
118.9 |
120.0 |
| C3 |
C2 |
N4 |
H39 |
48.3 |
95.0 |
| C3 |
C2 |
C1 |
N4 |
238.6 |
240.1 |
| C3 |
C2 |
C1 |
H35 |
119.4 |
120.0 |
| C1 |
C2 |
N4 |
C5 |
163.1 |
155.0 |
| N4 |
C2 |
C1 |
H35 |
240.8 |
240.0 |
| C1 |
C2 |
N4 |
H39 |
285.3 |
335.1 |
| H33 |
C1 |
C2 |
H34 |
240.0 |
240.0 |
| H33 |
C1 |
C2 |
H32 |
120.0 |
120.0 |
| H34 |
C1 |
C2 |
H32 |
240.0 |
240.0 |
| C3 |
C2 |
N4 |
H35 |
241.7 |
240.0 |
| N4 |
C2 |
C1 |
H33 |
301.4 |
60.0 |
| N4 |
C2 |
C1 |
H34 |
61.4 |
180.0 |
| N4 |
C2 |
C1 |
H32 |
181.4 |
299.9 |
| C1 |
C2 |
N4 |
H35 |
118.6 |
120.1 |
| C2 |
N4 |
C5 |
C6 |
349.4 |
0.0 |
| C2 |
N4 |
C5 |
N29 |
167.1 |
179.8 |
| C5 |
N4 |
C2 |
H39 |
237.8 |
179.9 |
| C5 |
N4 |
C2 |
H35 |
44.5 |
34.9 |
| C2 |
N4 |
C5 |
H39 |
122.2 |
180.1 |
| C6 |
C5 |
N4 |
N29 |
182.3 |
180.3 |
| N4 |
C5 |
C6 |
C7 |
181.5 |
179.9 |
| N4 |
C5 |
C6 |
H40 |
1.5 |
359.9 |
| N4 |
C5 |
N29 |
C28 |
180.2 |
179.7 |
| O18 |
C17 |
C16 |
H31 |
304.8 |
175.0 |
| H45 |
C17 |
O18 |
H44 |
240.4 |
120.0 |
| C9 |
C8 |
C12 |
H42 |
180.2 |
180.2 |
| N4 |
C5 |
C6 |
N29 |
177.6 |
179.7 |
| C6 |
C5 |
N4 |
H39 |
227.2 |
180.0 |
| C6 |
C5 |
N29 |
C28 |
357.9 |
359.5 |
| C5 |
C6 |
C7 |
C26 |
355.2 |
0.1 |
| C7 |
C6 |
C5 |
H40 |
180.0 |
180.0 |
| N4 |
C5 |
N29 |
C6 |
182.3 |
180.3 |
| N29 |
C5 |
N4 |
H39 |
44.9 |
359.7 |
| N29 |
C5 |
C6 |
C7 |
4.0 |
0.2 |
| N29 |
C5 |
C6 |
H40 |
184.0 |
180.2 |
| C5 |
N29 |
C28 |
H51 |
181.4 |
180.3 |
| N10 |
C11 |
C12 |
H42 |
179.3 |
179.9 |
| N10 |
C11 |
C13 |
O14 |
148.9 |
180.2 |
| C7 |
C6 |
C5 |
N29 |
4.0 |
0.2 |
| C5 |
C6 |
C7 |
H40 |
180.0 |
180.0 |
| C8 |
C7 |
C6 |
C26 |
187.5 |
179.9 |
| C6 |
C7 |
C26 |
CL2 |
180.6 |
180.0 |
| C6 |
C7 |
C8 |
C26 |
171.7 |
180.1 |
| C8 |
C7 |
C6 |
H40 |
2.8 |
0.0 |
| C8 |
C7 |
C26 |
CL2 |
352.4 |
0.1 |
| C12 |
C8 |
C7 |
C26 |
34.5 |
309.9 |
| C8 |
C12 |
C11 |
C13 |
182.7 |
180.0 |
| C11 |
C12 |
C8 |
H42 |
180.0 |
180.0 |
| C26 |
C7 |
C6 |
H40 |
175.2 |
180.1 |
| C28 |
C26 |
C7 |
CL2 |
183.4 |
179.9 |
| N15 |
C16 |
C17 |
H31 |
117.0 |
120.0 |
| C17 |
C16 |
C19 |
C20 |
254.3 |
279.7 |
| C19 |
C16 |
C17 |
H31 |
243.0 |
240.0 |
| C5 |
N29 |
C28 |
C26 |
1.4 |
0.5 |
| C7 |
C26 |
C28 |
CL2 |
176.7 |
180.1 |
| C8 |
C12 |
C11 |
H42 |
180.0 |
180.0 |
| C12 |
C11 |
C13 |
O14 |
325.2 |
0.1 |
| C13 |
C11 |
C12 |
H42 |
2.7 |
360.0 |
| C17 |
C16 |
N15 |
H31 |
243.6 |
240.0 |
| N15 |
C16 |
C19 |
C20 |
16.3 |
39.7 |
| C19 |
C16 |
N15 |
H31 |
120.5 |
120.0 |
| C17 |
C16 |
C19 |
H31 |
117.0 |
120.0 |
| N15 |
C16 |
C19 |
H31 |
239.0 |
240.0 |
| C25 |
C19 |
C16 |
C20 |
179.8 |
180.3 |
| C16 |
C19 |
C25 |
C23 |
180.8 |
180.0 |
| C16 |
C19 |
C25 |
H50 |
0.8 |
0.0 |
| C16 |
C19 |
C20 |
C21 |
181.0 |
180.0 |
| C16 |
C19 |
C20 |
H47 |
1.0 |
0.1 |
| C16 |
C19 |
C25 |
C20 |
180.2 |
179.7 |
| C25 |
C19 |
C16 |
H31 |
317.1 |
339.9 |
| C25 |
C19 |
C20 |
C21 |
1.2 |
359.7 |
| C25 |
C19 |
C20 |
H47 |
181.1 |
179.8 |
| C19 |
C25 |
C23 |
CL1 |
180.0 |
179.8 |
| C16 |
C19 |
C20 |
C25 |
179.8 |
180.3 |
| C20 |
C19 |
C16 |
H31 |
137.3 |
159.7 |
| C20 |
C19 |
C25 |
C23 |
0.7 |
0.3 |
| C20 |
C19 |
C25 |
H50 |
180.7 |
180.3 |
| C19 |
C20 |
C21 |
H48 |
178.1 |
180.3 |
| C23 |
C25 |
C19 |
C20 |
0.7 |
0.3 |
| C19 |
C25 |
C23 |
H50 |
180.0 |
180.0 |
| C25 |
C23 |
C22 |
H49 |
181.1 |
179.8 |
| C19 |
C20 |
C21 |
H47 |
180.0 |
180.1 |
| C22 |
C21 |
C20 |
H48 |
180.0 |
179.7 |
| C20 |
C21 |
C22 |
H49 |
180.8 |
180.2 |
| C19 |
C25 |
C23 |
C22 |
358.2 |
360.0 |
| C23 |
C22 |
C21 |
H48 |
180.8 |
180.0 |
| C21 |
C22 |
C23 |
H49 |
180.0 |
180.0 |
| CL1 |
C23 |
C22 |
H49 |
359.2 |
0.0 |
| C19 |
C20 |
C21 |
C22 |
358.1 |
0.0 |
| C20 |
C21 |
C22 |
H48 |
180.0 |
180.3 |
| C23 |
C22 |
C21 |
H49 |
180.0 |
180.0 |
| H33 |
C1 |
C2 |
N4 |
301.4 |
60.0 |
| C2 |
C1 |
H33 |
H34 |
120.0 |
120.0 |
| C2 |
C1 |
H33 |
H32 |
240.0 |
240.0 |
| H33 |
C1 |
C2 |
H35 |
60.6 |
180.0 |
| H34 |
C1 |
H33 |
H32 |
120.0 |
120.0 |
| H34 |
C1 |
C2 |
N4 |
61.4 |
180.0 |
| C2 |
C1 |
H34 |
H33 |
240.0 |
240.0 |
| C2 |
C1 |
H34 |
H32 |
120.0 |
120.0 |
| H34 |
C1 |
C2 |
H35 |
180.6 |
300.0 |
| H33 |
C1 |
H34 |
H32 |
240.0 |
240.0 |
| H32 |
C1 |
C2 |
N4 |
181.4 |
299.9 |
| C2 |
C1 |
H32 |
H33 |
120.0 |
120.1 |
| C2 |
C1 |
H32 |
H34 |
240.0 |
240.0 |
| H32 |
C1 |
C2 |
H35 |
300.6 |
60.0 |
| H33 |
C1 |
H32 |
H34 |
119.9 |
120.0 |
| C3 |
C2 |
H35 |
N4 |
118.9 |
119.9 |
| C1 |
C2 |
H35 |
N4 |
240.7 |
240.0 |
| H35 |
C2 |
C1 |
H33 |
60.6 |
180.0 |
| H35 |
C2 |
C1 |
H34 |
180.6 |
300.0 |
| H35 |
C2 |
C1 |
H32 |
300.6 |
60.0 |
| H35 |
C2 |
N4 |
C5 |
44.5 |
34.9 |
| H35 |
C2 |
N4 |
H39 |
166.7 |
215.0 |
| H36 |
C3 |
C2 |
N4 |
58.4 |
60.0 |
| H36 |
C3 |
C2 |
H35 |
299.5 |
300.1 |
| H37 |
C3 |
H36 |
H38 |
120.0 |
120.0 |
| H37 |
C3 |
C2 |
N4 |
178.4 |
180.0 |
| H37 |
C3 |
C2 |
H35 |
59.5 |
60.0 |
| H36 |
C3 |
H37 |
H38 |
240.0 |
240.0 |
| H38 |
C3 |
C2 |
N4 |
298.4 |
300.0 |
| H38 |
C3 |
C2 |
H35 |
179.5 |
180.0 |
| H36 |
C3 |
H38 |
H37 |
119.9 |
120.0 |
| C2 |
N4 |
H39 |
C5 |
225.5 |
179.9 |
| H39 |
N4 |
C2 |
H35 |
166.7 |
215.0 |
| H39 |
N4 |
C5 |
C6 |
227.2 |
180.0 |
| H39 |
N4 |
C5 |
N29 |
44.9 |
359.7 |
| H40 |
C6 |
C5 |
N29 |
184.0 |
180.2 |
| C5 |
C6 |
H40 |
C7 |
180.0 |
180.0 |
| H40 |
C6 |
C7 |
C26 |
175.2 |
180.1 |
| C8 |
C12 |
H42 |
C11 |
180.0 |
180.0 |
| H42 |
C12 |
C11 |
C13 |
2.7 |
360.0 |
| H31 |
C16 |
C19 |
C25 |
317.1 |
339.9 |
| H31 |
C16 |
C19 |
C20 |
137.3 |
159.7 |
| H48 |
C21 |
C22 |
H49 |
0.8 |
359.9 |
| H49 |
C22 |
C21 |
H48 |
0.8 |
359.9 |
| H50 |
C25 |
C19 |
C20 |
180.7 |
180.3 |
| C19 |
C25 |
H50 |
C23 |
180.0 |
180.0 |
| H50 |
C25 |
C23 |
CL1 |
0.0 |
359.8 |
| H51 |
C28 |
C26 |
CL2 |
0.9 |
360.0 |
| H41 |
C9 |
N10 |
H30 |
359.2 |
359.9 |
| H30 |
N10 |
C9 |
H41 |
359.2 |
359.9 |
| H43 |
N15 |
C16 |
H31 |
147.5 |
215.1 |
| O18 |
C17 |
H45 |
H44 |
119.4 |
240.0 |
| H45 |
C17 |
C16 |
H31 |
184.6 |
295.0 |
| O18 |
C17 |
H44 |
H45 |
240.5 |
120.0 |
| H44 |
C17 |
C16 |
H31 |
65.0 |
55.0 |
| H46 |
O18 |
C17 |
H45 |
300.2 |
60.1 |
| H46 |
O18 |
C17 |
H44 |
59.8 |
300.0 |
| C19 |
C20 |
H47 |
C21 |
180.0 |
179.9 |
| H47 |
C20 |
C21 |
H48 |
358.1 |
0.2 |