PDB Chemical Component EUS

Ideal Model

Chemical Description

Name N-[(1R,2S,3S,4R,5S)-5-amino-4-{[(2S,3R)-3-amino-6-(aminomethyl)-3,4-dihydro-2H-pyran-2-yl]oxy}-2-{[3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranosyl]oxy}-3-hydroxycyclohexyl]methanesulfonamide
Formula C20 H39 N5 O9 S
Formal charge 0
Molecular weight 525.617 g/mol
Component type saccharide

Chemical features

Atom count 74
Chiral atom count 11
Chiral atoms C11 C12 C13 C21 C23 C32 C33 C42 C43 C52 C62
Bond count 76
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) N-[(1R,2S,3S,4R,5S)-5-amino-4-{[(2S,3R)-3-amino-6-(aminomethyl)-3,4-dihydro-2H-pyran-2-yl]oxy}-2-{[3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranosyl]oxy}-3-hydroxycyclohexyl]methanesulfonamide
Systematic name (OpenEye OEToolkits) ~{N}-[(1~{R},2~{S},3~{S},4~{R},5~{S})-4-[[(2~{S},3~{R})-6-(aminomethyl)-3-azanyl-3,4-dihydro-2~{H}-pyran-2-yl]oxy]-5-azanyl-2-[(2~{R},3~{R},4~{R},5~{R})-5-methyl-4-(methylamino)-3,5-bis(oxidanyl)oxan-2-yl]oxy-3-oxidanyl-cyclohexyl]methanesulfonamide

Chemical Descriptors

Stereo SMILES (CACTVS) CN[C@@H]1[C@@H](O)[C@H](OC[C@]1(C)O)O[C@@H]2[C@@H](O)[C@H](O[C@H]3OC(=CC[C@H]3N)CN)[C@@H](N)C[C@H]2N[S](C)(=O)=O
SMILES (CACTVS) CN[CH]1[CH](O)[CH](OC[C]1(C)O)O[CH]2[CH](O)[CH](O[CH]3OC(=CC[CH]3N)CN)[CH](N)C[CH]2N[S](C)(=O)=O
Stereo SMILES (OpenEye) C[C@@]1(CO[C@@H]([C@@H]([C@H]1NC)O)O[C@H]2[C@@H](C[C@@H]([C@H]([C@@H]2O)O[C@@H]3[C@@H](CC=C(O3)CN)N)N)NS(=O)(=O)C)O
InChI descriptor InChI=1S/C20H39N5O9S/c1-20(28)8-31-19(14(27)17(20)24-2)34-16-12(25-35(3,29)30)6-11(23)15(13(16)26)33-18-10(22)5-4-9(7-21)32-18/h4,10-19,24-28H,5-8,21-23H2,1-3H3/t10-,11+,12-,13+,14-,15-,16+,17-,18-,19-,20+/m1/s1
InChIKey descriptor YMZLOLIFCOUGLA-CPIRLDNISA-N

Status Information

Last modified 2018-07-20
Created 2018-02-01
Release status REL
Model PDB code 6CAS
Processing site RCSB