PDB Chemical Component ESP

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for ESP

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C0 C1 1.381 1.471
C0 N1 1.295 1.335
C0 N2 1.301 1.335
C1 S2 1.794 1.785
C1 C5 1.375 1.359
N1 HH11 1.012 0.970
N1 HH12 0.987 0.970
N2 HH21 1.013 0.970
N2 HH22 0.984 0.969
S2 C3 1.763 1.776
C3 C4 1.390 1.417
C3 N6 1.318 1.314
C4 C5 1.378 1.406
C4 C9 1.377 1.420
C5 H5 1.079 1.079
N6 C7 1.323 1.319
C7 C8 1.397 1.388
C7 H7 1.079 1.079
C8 C9 1.384 1.364
C8 H8 1.079 1.080
C9 H9 1.077 1.080

Bond Angles for ESP

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C1 C0 N1 117.5 120.1
C1 C0 N2 118.2 120.0
C0 C1 S2 120.1 128.5
C0 C1 C5 132.0 128.5
N1 C0 N2 124.3 120.0
C0 N1 HH11 116.0 119.9
C0 N1 HH12 125.6 120.0
C0 N2 HH21 117.0 120.0
C0 N2 HH22 124.7 120.0
S2 C1 C5 107.8 103.0
C1 S2 C3 93.8 98.4
C1 C5 C4 114.1 119.8
C1 C5 H5 123.1 120.1
HH11 N1 HH12 118.1 120.0
HH21 N2 HH22 117.7 120.0
S2 C3 C4 106.0 103.2
S2 C3 N6 128.7 134.2
C4 C3 N6 125.4 122.6
C3 C4 C5 118.3 115.6
C3 C4 C9 118.2 115.9
C3 N6 C7 116.2 121.3
C5 C4 C9 123.5 128.5
C4 C5 H5 122.8 120.1
C4 C9 C8 117.5 119.1
C4 C9 H9 121.5 120.4
N6 C7 C8 123.3 120.4
N6 C7 H7 118.4 119.8
C8 C7 H7 118.3 119.8
C7 C8 C9 119.5 120.7
C7 C8 H8 120.2 119.6
C9 C8 H8 120.3 119.7
C8 C9 H9 121.0 120.4

Torsion Angles for ESP

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
N1 C0 C1 N2 179.4 180.0
C1 C0 N1 HH11 358.8 360.0
C1 C0 N1 HH12 172.3 179.7
C1 C0 N2 HH21 7.0 180.1
C1 C0 N2 HH22 178.6 360.0
S2 C1 C0 C5 179.9 180.4
C0 C1 S2 C3 180.2 179.9
C0 C1 C5 C4 179.5 179.8
C0 C1 C5 H5 360.0 0.1
C1 C0 N1 N2 180.6 180.0
N1 C0 C1 S2 170.5 330.1
N1 C0 C1 C5 350.6 149.6
N1 C0 N2 HH21 187.6 0.1
N1 C0 N2 HH22 359.2 180.0
HH11 N1 C0 HH12 186.5 180.3
C1 C0 N2 N1 179.4 180.0
N2 C0 C1 S2 351.1 150.1
N2 C0 C1 C5 171.2 329.6
N2 C0 N1 HH11 178.1 180.0
N2 C0 N1 HH12 351.7 359.7
HH21 N2 C0 HH22 188.4 180.1
S2 C1 C0 N1 170.5 330.1
S2 C1 C0 N2 351.1 150.1
C0 C1 S2 C5 180.1 179.6
S2 C1 C5 C4 359.6 359.5
S2 C1 C5 H5 180.1 179.8
C1 S2 C3 C4 0.2 360.0
C1 S2 C3 N6 179.6 180.0
C5 C1 C0 N1 350.6 149.6
C5 C1 C0 N2 171.2 329.6
C0 C1 C5 S2 179.9 180.4
C5 C1 S2 C3 0.1 0.3
C3 C4 C5 C1 0.5 0.6
C1 C5 C4 C9 180.1 180.2
C4 C5 C1 H5 179.6 179.7
HH11 N1 C0 N2 178.1 180.0
C0 N1 HH11 HH12 174.0 179.7
HH12 N1 C0 N2 351.7 359.7
C0 N1 HH12 HH11 186.6 180.3
C0 N2 HH21 HH22 172.2 179.9
C0 N2 HH22 HH21 188.5 180.1
C3 S2 C1 C5 0.1 0.3
C4 C3 S2 N6 180.6 180.0
S2 C3 C4 C5 359.6 359.7
S2 C3 C4 C9 180.0 180.0
S2 C3 N6 C7 180.1 180.0
C1 C5 C4 C3 0.5 0.6
S2 C3 C4 N6 179.4 180.0
C4 C3 N6 C7 359.4 360.0
C5 C4 C3 C9 179.6 179.7
C3 C4 C5 H5 180.1 180.3
C3 C4 C9 C8 359.5 0.0
C3 C4 C9 H9 180.0 180.1
S2 C3 N6 C4 180.7 180.0
N6 C3 C4 C5 180.2 179.7
N6 C3 C4 C9 0.6 0.0
C3 N6 C7 C8 0.5 0.0
C3 N6 C7 H7 180.1 180.0
C1 C5 C4 H5 180.4 180.3
C5 C4 C3 N6 180.2 179.7
C3 C4 C5 C9 180.4 180.3
C5 C4 C9 C8 180.0 180.3
C5 C4 C9 H9 0.4 0.4
C9 C4 C3 N6 0.6 0.0
C3 C4 C9 C5 179.6 179.7
C9 C4 C5 H5 359.7 359.9
C7 C8 C9 C4 0.4 360.0
C4 C9 C8 H8 180.2 179.9
C8 C9 C4 H9 179.5 179.9
C1 C5 H5 C4 179.5 179.7
H5 C5 C4 C9 359.7 359.9
C8 C7 N6 H7 180.4 180.0
N6 C7 C8 C9 359.5 360.0
N6 C7 C8 H8 179.7 180.0
C4 C9 C8 C7 0.4 360.0
N6 C7 C8 H7 179.6 180.0
C9 C8 C7 H8 179.8 179.9
C7 C8 C9 H9 180.0 179.9
N6 C7 H7 C8 180.4 180.0
H7 C7 C8 C9 180.0 180.0
H7 C7 C8 H8 0.2 0.1
C4 C9 C8 H9 180.5 180.1
C9 C8 C7 H7 180.0 180.0
C7 C8 C9 H8 180.2 180.1
H8 C8 C7 H7 0.2 0.1
C7 C8 H8 C9 179.8 179.9
H8 C8 C9 H9 359.8 359.9
C4 C9 H9 C8 179.5 179.9
H9 C9 C8 H8 359.8 359.9