PDB Chemical Component ESP
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for ESP
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C0 |
C1 |
1.381 |
1.471 |
C0 |
N1 |
1.295 |
1.335 |
C0 |
N2 |
1.301 |
1.335 |
C1 |
S2 |
1.794 |
1.785 |
C1 |
C5 |
1.375 |
1.359 |
N1 |
HH11 |
1.012 |
0.970 |
N1 |
HH12 |
0.987 |
0.970 |
N2 |
HH21 |
1.013 |
0.970 |
N2 |
HH22 |
0.984 |
0.969 |
S2 |
C3 |
1.763 |
1.776 |
C3 |
C4 |
1.390 |
1.417 |
C3 |
N6 |
1.318 |
1.314 |
C4 |
C5 |
1.378 |
1.406 |
C4 |
C9 |
1.377 |
1.420 |
C5 |
H5 |
1.079 |
1.079 |
N6 |
C7 |
1.323 |
1.319 |
C7 |
C8 |
1.397 |
1.388 |
C7 |
H7 |
1.079 |
1.079 |
C8 |
C9 |
1.384 |
1.364 |
C8 |
H8 |
1.079 |
1.080 |
C9 |
H9 |
1.077 |
1.080 |
Bond Angles for ESP
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C1 |
C0 |
N1 |
117.5 |
120.1 |
C1 |
C0 |
N2 |
118.2 |
120.0 |
C0 |
C1 |
S2 |
120.1 |
128.5 |
C0 |
C1 |
C5 |
132.0 |
128.5 |
N1 |
C0 |
N2 |
124.3 |
120.0 |
C0 |
N1 |
HH11 |
116.0 |
119.9 |
C0 |
N1 |
HH12 |
125.6 |
120.0 |
C0 |
N2 |
HH21 |
117.0 |
120.0 |
C0 |
N2 |
HH22 |
124.7 |
120.0 |
S2 |
C1 |
C5 |
107.8 |
103.0 |
C1 |
S2 |
C3 |
93.8 |
98.4 |
C1 |
C5 |
C4 |
114.1 |
119.8 |
C1 |
C5 |
H5 |
123.1 |
120.1 |
HH11 |
N1 |
HH12 |
118.1 |
120.0 |
HH21 |
N2 |
HH22 |
117.7 |
120.0 |
S2 |
C3 |
C4 |
106.0 |
103.2 |
S2 |
C3 |
N6 |
128.7 |
134.2 |
C4 |
C3 |
N6 |
125.4 |
122.6 |
C3 |
C4 |
C5 |
118.3 |
115.6 |
C3 |
C4 |
C9 |
118.2 |
115.9 |
C3 |
N6 |
C7 |
116.2 |
121.3 |
C5 |
C4 |
C9 |
123.5 |
128.5 |
C4 |
C5 |
H5 |
122.8 |
120.1 |
C4 |
C9 |
C8 |
117.5 |
119.1 |
C4 |
C9 |
H9 |
121.5 |
120.4 |
N6 |
C7 |
C8 |
123.3 |
120.4 |
N6 |
C7 |
H7 |
118.4 |
119.8 |
C8 |
C7 |
H7 |
118.3 |
119.8 |
C7 |
C8 |
C9 |
119.5 |
120.7 |
C7 |
C8 |
H8 |
120.2 |
119.6 |
C9 |
C8 |
H8 |
120.3 |
119.7 |
C8 |
C9 |
H9 |
121.0 |
120.4 |
Torsion Angles for ESP
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
N1 |
C0 |
C1 |
N2 |
179.4 |
180.0 |
C1 |
C0 |
N1 |
HH11 |
358.8 |
360.0 |
C1 |
C0 |
N1 |
HH12 |
172.3 |
179.7 |
C1 |
C0 |
N2 |
HH21 |
7.0 |
180.1 |
C1 |
C0 |
N2 |
HH22 |
178.6 |
360.0 |
S2 |
C1 |
C0 |
C5 |
179.9 |
180.4 |
C0 |
C1 |
S2 |
C3 |
180.2 |
179.9 |
C0 |
C1 |
C5 |
C4 |
179.5 |
179.8 |
C0 |
C1 |
C5 |
H5 |
360.0 |
0.1 |
C1 |
C0 |
N1 |
N2 |
180.6 |
180.0 |
N1 |
C0 |
C1 |
S2 |
170.5 |
330.1 |
N1 |
C0 |
C1 |
C5 |
350.6 |
149.6 |
N1 |
C0 |
N2 |
HH21 |
187.6 |
0.1 |
N1 |
C0 |
N2 |
HH22 |
359.2 |
180.0 |
HH11 |
N1 |
C0 |
HH12 |
186.5 |
180.3 |
C1 |
C0 |
N2 |
N1 |
179.4 |
180.0 |
N2 |
C0 |
C1 |
S2 |
351.1 |
150.1 |
N2 |
C0 |
C1 |
C5 |
171.2 |
329.6 |
N2 |
C0 |
N1 |
HH11 |
178.1 |
180.0 |
N2 |
C0 |
N1 |
HH12 |
351.7 |
359.7 |
HH21 |
N2 |
C0 |
HH22 |
188.4 |
180.1 |
S2 |
C1 |
C0 |
N1 |
170.5 |
330.1 |
S2 |
C1 |
C0 |
N2 |
351.1 |
150.1 |
C0 |
C1 |
S2 |
C5 |
180.1 |
179.6 |
S2 |
C1 |
C5 |
C4 |
359.6 |
359.5 |
S2 |
C1 |
C5 |
H5 |
180.1 |
179.8 |
C1 |
S2 |
C3 |
C4 |
0.2 |
360.0 |
C1 |
S2 |
C3 |
N6 |
179.6 |
180.0 |
C5 |
C1 |
C0 |
N1 |
350.6 |
149.6 |
C5 |
C1 |
C0 |
N2 |
171.2 |
329.6 |
C0 |
C1 |
C5 |
S2 |
179.9 |
180.4 |
C5 |
C1 |
S2 |
C3 |
0.1 |
0.3 |
C3 |
C4 |
C5 |
C1 |
0.5 |
0.6 |
C1 |
C5 |
C4 |
C9 |
180.1 |
180.2 |
C4 |
C5 |
C1 |
H5 |
179.6 |
179.7 |
HH11 |
N1 |
C0 |
N2 |
178.1 |
180.0 |
C0 |
N1 |
HH11 |
HH12 |
174.0 |
179.7 |
HH12 |
N1 |
C0 |
N2 |
351.7 |
359.7 |
C0 |
N1 |
HH12 |
HH11 |
186.6 |
180.3 |
C0 |
N2 |
HH21 |
HH22 |
172.2 |
179.9 |
C0 |
N2 |
HH22 |
HH21 |
188.5 |
180.1 |
C3 |
S2 |
C1 |
C5 |
0.1 |
0.3 |
C4 |
C3 |
S2 |
N6 |
180.6 |
180.0 |
S2 |
C3 |
C4 |
C5 |
359.6 |
359.7 |
S2 |
C3 |
C4 |
C9 |
180.0 |
180.0 |
S2 |
C3 |
N6 |
C7 |
180.1 |
180.0 |
C1 |
C5 |
C4 |
C3 |
0.5 |
0.6 |
S2 |
C3 |
C4 |
N6 |
179.4 |
180.0 |
C4 |
C3 |
N6 |
C7 |
359.4 |
360.0 |
C5 |
C4 |
C3 |
C9 |
179.6 |
179.7 |
C3 |
C4 |
C5 |
H5 |
180.1 |
180.3 |
C3 |
C4 |
C9 |
C8 |
359.5 |
0.0 |
C3 |
C4 |
C9 |
H9 |
180.0 |
180.1 |
S2 |
C3 |
N6 |
C4 |
180.7 |
180.0 |
N6 |
C3 |
C4 |
C5 |
180.2 |
179.7 |
N6 |
C3 |
C4 |
C9 |
0.6 |
0.0 |
C3 |
N6 |
C7 |
C8 |
0.5 |
0.0 |
C3 |
N6 |
C7 |
H7 |
180.1 |
180.0 |
C1 |
C5 |
C4 |
H5 |
180.4 |
180.3 |
C5 |
C4 |
C3 |
N6 |
180.2 |
179.7 |
C3 |
C4 |
C5 |
C9 |
180.4 |
180.3 |
C5 |
C4 |
C9 |
C8 |
180.0 |
180.3 |
C5 |
C4 |
C9 |
H9 |
0.4 |
0.4 |
C9 |
C4 |
C3 |
N6 |
0.6 |
0.0 |
C3 |
C4 |
C9 |
C5 |
179.6 |
179.7 |
C9 |
C4 |
C5 |
H5 |
359.7 |
359.9 |
C7 |
C8 |
C9 |
C4 |
0.4 |
360.0 |
C4 |
C9 |
C8 |
H8 |
180.2 |
179.9 |
C8 |
C9 |
C4 |
H9 |
179.5 |
179.9 |
C1 |
C5 |
H5 |
C4 |
179.5 |
179.7 |
H5 |
C5 |
C4 |
C9 |
359.7 |
359.9 |
C8 |
C7 |
N6 |
H7 |
180.4 |
180.0 |
N6 |
C7 |
C8 |
C9 |
359.5 |
360.0 |
N6 |
C7 |
C8 |
H8 |
179.7 |
180.0 |
C4 |
C9 |
C8 |
C7 |
0.4 |
360.0 |
N6 |
C7 |
C8 |
H7 |
179.6 |
180.0 |
C9 |
C8 |
C7 |
H8 |
179.8 |
179.9 |
C7 |
C8 |
C9 |
H9 |
180.0 |
179.9 |
N6 |
C7 |
H7 |
C8 |
180.4 |
180.0 |
H7 |
C7 |
C8 |
C9 |
180.0 |
180.0 |
H7 |
C7 |
C8 |
H8 |
0.2 |
0.1 |
C4 |
C9 |
C8 |
H9 |
180.5 |
180.1 |
C9 |
C8 |
C7 |
H7 |
180.0 |
180.0 |
C7 |
C8 |
C9 |
H8 |
180.2 |
180.1 |
H8 |
C8 |
C7 |
H7 |
0.2 |
0.1 |
C7 |
C8 |
H8 |
C9 |
179.8 |
179.9 |
H8 |
C8 |
C9 |
H9 |
359.8 |
359.9 |
C4 |
C9 |
H9 |
C8 |
179.5 |
179.9 |
H9 |
C9 |
C8 |
H8 |
359.8 |
359.9 |