PDB Chemical Component EQP

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for EQP

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
P1	C2	1.771	1.823
P1	O1P	1.448	1.481
P1	O2P	1.558	1.609
P1	O3P	1.493	1.609
C2	C3	1.536	1.530
C2	O6	1.413	1.426
C2	H2	1.115	1.091
C3	C4	1.552	1.532
C3	H32	1.115	1.090
C3	H31	1.116	1.089
C4	C5	1.550	1.532
C4	O4	1.422	1.429
C4	H4	1.115	1.090
C5	C6	1.544	1.529
C5	N5	1.455	1.464
C5	H5	1.114	1.091
C6	C7	1.509	1.530
C6	O6	1.450	1.425
C6	H6	1.115	1.090
C7	C8	1.564	1.529
C7	O7	1.396	1.429
C7	H7	1.115	1.089
C8	C9	1.519	1.529
C8	O8	1.416	1.429
C8	H8	1.116	1.089
C9	O9	1.423	1.429
C9	H92	1.115	1.090
C9	H91	1.115	1.090
C10	C11	1.521	1.506
C10	N5	1.333	1.348
C10	O10	1.228	1.213
C11	H111	1.114	1.090
C11	H113	1.116	1.090
C11	H112	1.116	1.090
N5	HN5	1.020	0.970
O2P	HOP2	0.950	0.966
O3P	HOP3	0.950	0.967
O4	HO4	0.950	0.967
O7	HO7	0.949	0.967
O8	HO8	0.950	0.967
O9	HO9	0.949	0.967

Bond Angles for EQP

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	P1	O1P	113.5	109.4
C2	P1	O2P	104.3	109.5
C2	P1	O3P	107.7	109.5
P1	C2	C3	116.2	109.5
P1	C2	O6	109.7	109.4
P1	C2	H2	105.1	109.4
O1P	P1	O2P	102.8	109.4
O1P	P1	O3P	112.9	109.4
O2P	P1	O3P	115.4	109.5
P1	O2P	HOP2	104.3	106.8
P1	O3P	HOP3	107.7	106.7
C3	C2	O6	111.0	109.8
C3	C2	H2	103.5	109.4
C2	C3	C4	110.8	109.0
C2	C3	H32	111.7	109.5
C2	C3	H31	111.7	109.5
O6	C2	H2	111.0	109.3
C2	O6	C6	115.4	107.8
C4	C3	H32	111.7	109.6
C4	C3	H31	111.7	109.5
C3	C4	C5	109.9	108.7
C3	C4	O4	110.3	109.7
C3	C4	H4	108.7	109.6
H32	C3	H31	98.7	109.7
C5	C4	O4	109.7	109.6
C5	C4	H4	109.4	109.6
C4	C5	C6	107.7	109.1
C4	C5	N5	106.8	109.6
C4	C5	H5	113.8	109.5
O4	C4	H4	108.9	109.6
C4	O4	HO4	110.3	106.8
C6	C5	N5	113.6	109.6
C6	C5	H5	107.1	109.5
C5	C6	C7	117.0	109.5
C5	C6	O6	107.2	109.8
C5	C6	H6	105.5	109.3
N5	C5	H5	108.0	109.5
C5	N5	C10	120.5	120.0
C5	N5	HN5	124.1	120.0
C7	C6	O6	108.3	109.5
C7	C6	H6	104.4	109.4
C6	C7	C8	107.9	109.5
C6	C7	O7	109.6	109.4
C6	C7	H7	111.4	109.5
O6	C6	H6	114.7	109.4
C8	C7	O7	112.4	109.5
C8	C7	H7	108.6	109.6
C7	C8	C9	110.0	109.5
C7	C8	O8	108.9	109.4
C7	C8	H8	109.9	109.6
O7	C7	H7	106.9	109.5
C7	O7	HO7	109.6	106.8
C9	C8	O8	110.5	109.5
C9	C8	H8	108.3	109.5
C8	C9	O9	109.1	109.5
C8	C9	H92	112.3	109.5
C8	C9	H91	112.3	109.5
O8	C8	H8	109.3	109.4
C8	O8	HO8	108.9	106.8
O9	C9	H92	112.3	109.5
O9	C9	H91	112.4	109.4
C9	O9	HO9	109.1	106.8
H92	C9	H91	98.1	109.4
C11	C10	N5	115.7	120.1
C11	C10	O10	121.7	120.0
C10	C11	H111	115.7	109.6
C10	C11	H113	109.9	109.5
C10	C11	H112	109.9	109.5
N5	C10	O10	122.4	120.0
C10	N5	HN5	115.4	120.0
H111	C11	H113	110.0	109.4
H111	C11	H112	110.0	109.4
H113	C11	H112	100.2	109.5

Torsion Angles for EQP

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O1P	P1	C2	O2P	248.8	240.0
O1P	P1	C2	O3P	125.8	119.9
O2P	P1	C2	O3P	236.9	239.9
C2	P1	O2P	HOP2	180.0	180.0
C2	P1	O3P	HOP3	179.9	299.9
C3	C2	P1	O6	127.0	120.3
C3	C2	P1	H2	246.3	240.1
P1	C2	C3	C4	183.4	178.7
P1	C2	C3	H32	308.6	58.8
P1	C2	C3	H31	58.1	298.5
O6	C2	P1	H2	119.3	119.8
P1	C2	O6	C6	188.4	187.7
C2	P1	O1P	O2P	112.1	120.0
C2	P1	O1P	O3P	237.1	240.0
O1P	P1	C2	C3	322.0	60.0
O1P	P1	C2	O6	195.1	299.6
O1P	P1	C2	H2	75.7	179.9
O2P	P1	O1P	O3P	125.0	120.0
O1P	P1	O2P	HOP2	298.8	299.9
O1P	P1	O3P	HOP3	53.8	180.0
C2	P1	O2P	O1P	241.2	240.1
C2	P1	O2P	O3P	117.9	120.1
O2P	P1	C2	C3	73.2	180.0
O2P	P1	C2	O6	306.2	59.6
O2P	P1	C2	H2	186.9	299.8
O1P	P1	O2P	O3P	236.7	240.0
O2P	P1	O3P	HOP3	296.0	60.0
C2	P1	O3P	O1P	126.1	119.9
C2	P1	O3P	O2P	244.0	239.9
O3P	P1	C2	C3	196.3	300.1
O3P	P1	C2	O6	69.3	179.7
O3P	P1	C2	H2	310.0	60.0
O1P	P1	O3P	O2P	117.8	120.0
O3P	P1	O2P	HOP2	62.1	59.9
C3	C2	P1	O1P	322.0	60.0
C3	C2	P1	O2P	73.2	180.0
C3	C2	P1	O3P	196.3	300.1
P1	C2	C3	O6	233.7	239.9
P1	C2	C3	H2	114.6	119.8
O6	C2	C3	H2	240.9	240.0
C3	C2	O6	C6	58.6	67.5
C4	C3	C2	H32	234.7	119.9
C4	C3	C2	H31	125.2	240.2
C2	C3	C4	C5	52.0	53.7
C2	C3	C4	O4	173.1	173.6
C2	C3	C4	H4	292.4	293.9
H32	C3	C2	H31	250.5	120.3
O6	C2	P1	O1P	195.1	299.6
O6	C2	P1	O2P	306.2	59.6
O6	C2	P1	O3P	69.3	179.7
P1	C2	O6	C3	129.8	120.2
P1	C2	O6	H2	244.3	240.2
C3	C2	O6	H2	114.5	120.1
O6	C2	C3	C4	309.7	298.8
O6	C2	C3	H32	74.9	179.0
O6	C2	C3	H31	184.4	58.7
C5	C6	O6	C2	295.6	292.6
C7	C6	O6	C2	168.5	172.4
C2	O6	C6	H6	52.4	52.5
H2	C2	P1	O1P	75.7	179.9
H2	C2	P1	O2P	186.9	299.8
H2	C2	P1	O3P	310.0	60.0
P1	C2	H2	C3	237.6	240.1
P1	C2	H2	O6	118.5	119.8
C3	C2	H2	O6	240.8	239.7
H2	C2	C3	C4	68.8	58.8
H2	C2	C3	H32	194.0	299.0
H2	C2	C3	H31	303.5	178.7
H2	C2	O6	C6	304.0	307.4
C4	C3	C2	O6	309.7	298.8
C4	C3	C2	H2	68.8	58.8
C2	C3	C4	H32	125.3	240.2
C2	C3	C4	H31	234.8	119.8
H32	C3	C4	H31	109.5	239.7
C5	C4	C3	O4	239.0	240.1
C5	C4	C3	H4	119.7	119.7
C3	C4	C5	C6	302.0	306.4
C3	C4	C5	N5	179.5	186.4
C3	C4	C5	H5	60.5	66.2
O4	C4	C3	H4	240.7	239.6
C3	C4	O4	HO4	179.9	60.7
H32	C3	C2	O6	74.9	179.0
H32	C3	C2	H2	194.0	299.0
C2	C3	H32	C4	235.3	119.5
C2	C3	H32	H31	117.6	239.8
C4	C3	H32	H31	242.4	120.3
H32	C3	C4	C5	286.8	173.5
H32	C3	C4	O4	47.8	293.4
H32	C3	C4	H4	167.1	53.8
H31	C3	C2	O6	184.4	58.7
H31	C3	C2	H2	303.5	178.7
C2	C3	H31	C4	124.7	240.5
C2	C3	H31	H32	242.4	120.2
C4	C3	H31	H32	117.6	239.7
H31	C3	C4	C5	177.3	293.9
H31	C3	C4	O4	298.3	53.7
H31	C3	C4	H4	57.6	174.1
C5	C4	C3	H32	286.8	173.5
C5	C4	C3	H31	177.3	293.9
C3	C4	C5	O4	121.4	119.9
C3	C4	C5	H4	240.7	240.2
O4	C4	C5	H4	119.4	120.3
C5	C4	O4	HO4	301.1	180.1
C6	C5	C4	N5	122.4	120.0
C6	C5	C4	H5	241.5	240.2
C4	C5	C6	C7	183.4	181.2
C4	C5	C6	O6	61.7	61.0
C4	C5	C6	H6	299.0	301.0
N5	C5	C4	H5	119.0	120.2
C4	C5	N5	C10	210.6	269.9
C4	C5	N5	HN5	30.6	89.8
O4	C4	C3	H32	47.8	293.4
O4	C4	C3	H31	298.3	53.7
C3	C4	O4	C5	238.9	240.7
C3	C4	O4	H4	119.2	120.4
C5	C4	O4	H4	240.3	239.7
O4	C4	C5	C6	180.6	186.4
O4	C4	C5	N5	58.2	66.4
O4	C4	C5	H5	299.1	306.3
H4	C4	C3	H32	167.1	53.8
H4	C4	C3	H31	57.6	174.1
C3	C4	H4	C5	120.0	119.2
C3	C4	H4	O4	239.8	239.5
C5	C4	H4	O4	119.9	120.3
H4	C4	C5	C6	61.2	66.2
H4	C4	C5	N5	298.8	306.2
H4	C4	C5	H5	179.8	186.0
H4	C4	O4	HO4	60.7	300.3
C2	O6	C6	C5	295.6	292.6
C6	C5	C4	O4	180.6	186.4
C6	C5	C4	H4	61.2	66.2
C4	C5	C6	N5	241.9	240.0
C4	C5	C6	H5	122.8	119.8
N5	C5	C6	H5	240.9	239.8
C6	C5	N5	C10	92.0	150.2
C6	C5	N5	HN5	272.0	330.1
C7	C6	C5	O6	121.7	120.2
C7	C6	C5	H6	244.4	240.2
C5	C6	C7	C8	182.3	179.6
C5	C6	C7	O7	305.0	299.6
C5	C6	C7	H7	63.2	59.5
O6	C6	C5	H6	122.7	120.0
N5	C5	C4	O4	58.2	66.4
N5	C5	C4	H4	298.8	306.2
C4	C5	N5	C6	118.6	119.7
C4	C5	N5	H5	237.2	239.8
C6	C5	N5	H5	118.6	120.1
N5	C5	C6	C7	301.5	301.2
N5	C5	C6	O6	179.8	181.0
N5	C5	C6	H6	57.1	61.0
C11	C10	N5	C5	178.4	180.0
C5	N5	C10	O10	353.5	359.9
C10	N5	C5	HN5	180.0	180.1
H5	C5	C4	O4	299.1	306.3
H5	C5	C4	H4	179.8	186.0
C4	C5	H5	C6	241.1	240.4
C4	C5	H5	N5	118.4	120.2
C6	C5	H5	N5	237.3	239.8
H5	C5	C6	C7	60.6	61.4
H5	C5	C6	O6	298.9	301.2
H5	C5	C6	H6	176.2	181.2
H5	C5	N5	C10	333.4	30.1
H5	C5	N5	HN5	153.4	210.0
C2	O6	C6	C7	168.5	172.4
C7	C6	C5	N5	301.5	301.2
C7	C6	C5	H5	60.6	61.4
C5	C6	C7	O6	238.9	239.5
C5	C6	C7	H6	116.2	119.7
O6	C6	C7	H6	237.3	240.2
C8	C7	C6	O7	237.3	240.1
C8	C7	C6	H7	119.2	120.1
C6	C7	C8	C9	178.2	180.0
C6	C7	C8	O8	299.4	300.0
C6	C7	C8	H8	59.1	59.9
O7	C7	C6	H7	241.9	240.1
C6	C7	O7	HO7	180.0	300.0
C6	O6	C2	H2	304.0	307.4
O6	C6	C5	N5	179.8	181.0
O6	C6	C5	H5	298.9	301.2
C5	C6	O6	C7	127.0	120.2
C5	C6	O6	H6	243.2	240.1
C7	C6	O6	H6	116.2	119.8
O6	C6	C7	C8	303.5	300.1
O6	C6	C7	O7	66.2	60.0
O6	C6	C7	H7	184.3	180.0
H6	C6	C5	N5	57.1	61.0
H6	C6	C5	H5	176.2	181.2
C5	C6	H6	C7	236.1	240.2
C5	C6	H6	O6	117.7	120.3
C7	C6	H6	O6	241.7	240.1
H6	C6	C7	C8	66.1	59.9
H6	C6	C7	O7	188.8	179.9
H6	C6	C7	H7	307.0	299.8
C8	C7	C6	O6	303.5	300.1
C8	C7	C6	H6	66.1	59.9
C6	C7	C8	O7	121.0	119.9
C6	C7	C8	H7	239.1	239.9
O7	C7	C8	H7	118.1	120.0
C8	C7	O7	HO7	300.0	59.9
C9	C8	C7	O8	238.8	240.0
C9	C8	C7	H8	119.1	120.1
C7	C8	C9	O9	60.9	179.9
C7	C8	C9	H92	186.1	300.0
C7	C8	C9	H91	295.6	59.9
O8	C8	C7	H8	240.3	240.0
C7	C8	O8	HO8	179.9	300.0
O7	C7	C6	O6	66.2	60.0
O7	C7	C6	H6	188.8	179.9
C6	C7	O7	C8	240.0	240.0
C6	C7	O7	H7	120.9	120.0
C8	C7	O7	H7	240.9	239.9
O7	C7	C8	C9	57.2	60.1
O7	C7	C8	O8	178.4	180.1
O7	C7	C8	H8	298.1	300.0
H7	C7	C6	O6	184.3	180.0
H7	C7	C6	H6	307.0	299.8
C6	C7	H7	C8	118.7	120.1
C6	C7	H7	O7	240.3	240.1
C8	C7	H7	O7	121.5	120.0
H7	C7	C8	C9	299.1	300.1
H7	C7	C8	O8	60.3	60.0
H7	C7	C8	H8	180.0	180.0
H7	C7	O7	HO7	59.1	180.0
C9	C8	C7	O7	57.2	60.1
C9	C8	C7	H7	299.1	300.1
C7	C8	C9	O8	120.2	120.0
C7	C8	C9	H8	239.9	239.9
O8	C8	C9	H8	119.7	119.9
C9	C8	O8	HO8	300.8	60.0
O9	C9	C8	H92	234.8	240.0
O9	C9	C8	H91	125.3	120.0
C8	C9	O9	HO9	179.9	180.0
H92	C9	C8	H91	250.5	240.1
O8	C8	C7	O7	178.4	180.1
O8	C8	C7	H7	60.3	60.0
C7	C8	O8	C9	239.1	240.0
C7	C8	O8	H8	120.1	120.0
C9	C8	O8	H8	241.0	240.1
O8	C8	C9	O9	300.7	60.0
O8	C8	C9	H92	65.9	180.0
O8	C8	C9	H91	175.4	299.9
H8	C8	C7	O7	298.1	300.0
H8	C8	C7	H7	180.0	180.0
C7	C8	H8	C9	120.1	120.1
C7	C8	H8	O8	240.6	240.0
C9	C8	H8	O8	120.4	119.9
H8	C8	C9	O9	181.0	300.0
H8	C8	C9	H92	306.2	60.1
H8	C8	C9	H91	55.7	180.0
H8	C8	O8	HO8	59.9	179.9
O9	C9	C8	O8	300.7	60.0
O9	C9	C8	H8	181.0	300.0
C8	C9	O9	H92	125.2	120.0
C8	C9	O9	H91	234.8	239.9
H92	C9	O9	H91	109.5	119.9
H92	C9	C8	O8	65.9	180.0
H92	C9	C8	H8	306.2	60.1
C8	C9	H92	O9	236.6	239.9
C8	C9	H92	H91	118.3	120.0
O9	C9	H92	H91	241.7	240.1
H92	C9	O9	HO9	54.7	59.9
H91	C9	C8	O8	175.4	299.9
H91	C9	C8	H8	55.7	180.0
C8	C9	H91	O9	123.5	120.1
C8	C9	H91	H92	241.7	240.0
O9	C9	H91	H92	118.3	119.9
H91	C9	O9	HO9	305.2	300.0
C5	N5	C10	C11	178.4	180.0
N5	C10	C11	O10	175.2	180.0
C11	C10	N5	HN5	358.4	0.1
H111	C11	C10	H113	234.7	240.0
H111	C11	C10	H112	125.3	120.0
H113	C11	C10	H112	250.6	240.0
C10	N5	C5	H5	333.4	30.1
C5	N5	C10	HN5	180.0	179.9
C11	C10	N5	O10	184.9	180.0
N5	C10	C11	H111	180.0	180.0
N5	C10	C11	H113	305.3	300.0
N5	C10	C11	H112	54.7	60.0
C11	C10	O10	N5	174.8	180.0
O10	C10	C11	H111	4.8	0.0
O10	C10	C11	H113	130.2	120.0
O10	C10	C11	H112	239.6	240.0
O10	C10	N5	HN5	173.5	180.0
H111	C11	C10	N5	180.0	180.0
H111	C11	C10	O10	4.8	0.0
C10	C11	H111	H113	125.3	120.0
C10	C11	H111	H112	234.7	239.9
H113	C11	H111	H112	109.4	119.9
H113	C11	C10	N5	305.3	300.0
H113	C11	C10	O10	130.2	120.0
C10	C11	H113	H111	231.5	239.9
C10	C11	H113	H112	115.7	120.0
H111	C11	H113	H112	244.2	240.1
H112	C11	C10	N5	54.7	60.0
H112	C11	C10	O10	239.6	240.0
C10	C11	H112	H111	128.5	120.1
C10	C11	H112	H113	244.3	240.0
H111	C11	H112	H113	115.8	119.9
HN5	N5	C5	H5	153.4	210.0
C5	N5	HN5	C10	180.0	180.1
HN5	N5	C10	O10	173.5	180.0
HOP2	O2P	P1	O3P	62.1	59.9
HO4	O4	C4	H4	60.7	300.3
HO7	O7	C7	H7	59.1	180.0
HO8	O8	C8	H8	59.9	179.9
HO9	O9	C9	H92	54.7	59.9
HO9	O9	C9	H91	305.2	300.0