PDB Chemical Component EPE

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for EPE

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N1 C2 1.506 1.467
N1 C6 1.508 1.467
N1 C9 1.500 1.468
C2 C3 1.525 1.529
C2 H21 1.114 1.091
C2 H22 1.115 1.090
C3 N4 1.470 1.467
C3 H31 1.115 1.090
C3 H32 1.114 1.091
N4 C5 1.484 1.467
N4 C7 1.487 1.469
C5 C6 1.526 1.529
C5 H51 1.114 1.089
C5 H52 1.116 1.090
C6 H61 1.115 1.090
C6 H62 1.115 1.088
C7 C8 1.513 1.529
C7 H71 1.116 1.090
C7 H72 1.115 1.089
C8 O8 1.424 1.428
C8 H81 1.115 1.090
C8 H82 1.114 1.090
O8 HO8 0.949 0.967
C9 C10 1.549 1.529
C9 H91 1.115 1.090
C9 H92 1.115 1.090
C10 S 1.798 1.814
C10 H101 1.115 1.091
C10 H102 1.115 1.090
S O1S 1.444 1.420
S O2S 1.467 1.422
S O3S 1.440 1.522
O3S HOS3 0.950 0.967

Bond Angles for EPE

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 N1 C6 107.8 106.9
C2 N1 C9 111.3 106.7
N1 C2 C3 108.1 109.7
N1 C2 H21 112.8 109.4
N1 C2 H22 112.7 109.4
C6 N1 C9 106.4 106.7
N1 C6 C5 108.2 109.7
N1 C6 H61 112.7 109.4
N1 C6 H62 112.7 109.5
N1 C9 C10 109.5 109.5
N1 C9 H91 112.2 109.5
N1 C9 H92 112.2 109.5
C3 C2 H21 112.7 109.5
C3 C2 H22 112.7 109.5
C2 C3 N4 110.9 109.7
C2 C3 H31 111.7 109.5
C2 C3 H32 111.7 109.4
H21 C2 H22 97.7 109.4
N4 C3 H31 111.6 109.5
N4 C3 H32 111.6 109.4
C3 N4 C5 109.2 106.9
C3 N4 C7 113.4 106.7
H31 C3 H32 98.8 109.4
C5 N4 C7 106.4 106.7
N4 C5 C6 110.6 109.7
N4 C5 H51 111.8 109.5
N4 C5 H52 111.8 109.4
N4 C7 C8 113.1 109.5
N4 C7 H71 110.9 109.4
N4 C7 H72 110.9 109.5
C6 C5 H51 111.8 109.4
C6 C5 H52 111.8 109.5
C5 C6 H61 112.7 109.4
C5 C6 H62 112.7 109.5
H51 C5 H52 98.6 109.4
H61 C6 H62 97.7 109.4
C8 C7 H71 110.9 109.5
C8 C7 H72 110.9 109.5
C7 C8 O8 114.2 109.5
C7 C8 H81 110.4 109.5
C7 C8 H82 110.4 109.4
H71 C7 H72 99.4 109.5
O8 C8 H81 110.5 109.5
O8 C8 H82 110.5 109.5
C8 O8 HO8 114.2 106.8
H81 C8 H82 99.8 109.5
C10 C9 H91 112.2 109.4
C10 C9 H92 112.2 109.5
C9 C10 S 108.8 109.6
C9 C10 H101 112.4 109.5
C9 C10 H102 112.4 109.6
H91 C9 H92 98.2 109.5
S C10 H101 112.4 109.5
S C10 H102 112.4 109.4
C10 S O1S 106.1 111.7
C10 S O2S 106.7 111.6
C10 S O3S 105.4 103.2
H101 C10 H102 98.1 109.4
O1S S O2S 112.7 122.1
O1S S O3S 112.4 102.9
O2S S O3S 112.9 102.8
S O3S HOS3 105.4 106.8

Torsion Angles for EPE

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 N1 C2 C9 243.7 113.9
C2 N1 C6 C5 297.7 61.2
C2 N1 C6 H61 62.9 181.2
C2 N1 C6 H62 172.4 301.1
C2 N1 C9 C10 74.9 180.0
C2 N1 C9 H91 200.2 300.0
C2 N1 C9 H92 309.6 60.0
C3 C2 N1 H21 234.7 120.1
C3 C2 N1 H22 125.2 239.9
N1 C2 C3 N4 298.6 63.0
N1 C2 C3 H31 63.8 302.8
N1 C2 C3 H32 173.3 183.0
H21 C2 N1 H22 250.5 119.9
C2 N1 C6 C9 119.5 246.1
C6 N1 C2 C3 62.3 298.8
C6 N1 C2 H21 187.6 178.7
C6 N1 C2 H22 297.0 58.8
C6 N1 C9 C10 192.1 66.1
C6 N1 C9 H91 317.4 186.0
C6 N1 C9 H92 66.8 306.0
N4 C5 C6 N1 61.0 297.0
N1 C6 C5 H51 295.7 177.0
N1 C6 C5 H52 186.2 57.1
C5 C6 N1 H61 234.8 240.0
C5 C6 N1 H62 125.3 120.1
H61 C6 N1 H62 250.5 240.1
C2 N1 C9 C6 242.8 114.0
C9 N1 C2 C3 178.6 184.9
C9 N1 C2 H21 303.8 64.8
C9 N1 C2 H22 53.3 305.0
C9 N1 C6 C5 178.2 175.1
C9 N1 C6 H61 303.5 295.1
C9 N1 C6 H62 53.0 55.0
C10 C9 N1 H91 234.7 240.1
C10 C9 N1 H92 125.3 120.0
N1 C9 C10 S 172.2 180.0
N1 C9 C10 H101 297.5 300.0
N1 C9 C10 H102 47.0 59.9
H91 C9 N1 H92 250.6 240.0
C3 C2 N1 C6 62.3 298.8
C3 C2 N1 C9 178.6 184.9
N1 C2 C3 H21 125.3 239.9
N1 C2 C3 H22 234.8 120.0
H21 C2 C3 H22 109.5 240.1
N4 C3 C2 H31 234.8 120.1
N4 C3 C2 H32 125.2 240.0
C2 C3 N4 C5 59.1 298.8
C2 C3 N4 C7 177.5 184.9
H31 C3 C2 H32 250.4 119.8
H21 C2 N1 C6 187.6 178.7
H21 C2 N1 C9 303.8 64.8
N1 C2 H21 C3 237.3 120.2
N1 C2 H21 H22 118.7 240.1
C3 C2 H21 H22 241.4 119.9
H21 C2 C3 N4 173.3 183.0
H21 C2 C3 H31 298.5 62.9
H21 C2 C3 H32 48.1 303.1
H22 C2 N1 C6 297.0 58.8
H22 C2 N1 C9 53.3 305.0
N1 C2 H22 C3 122.7 239.8
N1 C2 H22 H21 241.3 119.9
C3 C2 H22 H21 118.7 240.1
H22 C2 C3 N4 63.8 302.9
H22 C2 C3 H31 189.0 182.8
H22 C2 C3 H32 298.6 63.0
N4 C3 C2 H21 173.3 183.0
N4 C3 C2 H22 63.8 302.9
C2 C3 N4 H31 125.3 239.9
C2 C3 N4 H32 234.7 120.0
H31 C3 N4 H32 109.5 240.1
C5 N4 C3 C7 241.6 113.9
C3 N4 C5 C6 301.2 61.2
C3 N4 C5 H51 66.4 181.3
C3 N4 C5 H52 175.9 301.2
C3 N4 C7 C8 53.7 180.0
C3 N4 C7 H71 179.0 60.0
C3 N4 C7 H72 288.4 300.0
H31 C3 C2 H21 298.5 62.9
H31 C3 C2 H22 189.0 182.8
C2 C3 H31 N4 235.2 120.2
C2 C3 H31 H32 117.6 240.1
N4 C3 H31 H32 242.5 119.9
H31 C3 N4 C5 293.8 58.9
H31 C3 N4 C7 52.2 305.0
H32 C3 C2 H21 48.1 303.1
H32 C3 C2 H22 298.6 63.0
C2 C3 H32 N4 124.8 239.8
C2 C3 H32 H31 242.4 119.9
N4 C3 H32 H31 117.5 240.1
H32 C3 N4 C5 184.3 178.8
H32 C3 N4 C7 302.7 64.9
N1 C6 C5 N4 61.0 297.0
C5 N4 C3 H31 293.8 58.9
C5 N4 C3 H32 184.3 178.8
C3 N4 C5 C7 122.7 246.1
C5 N4 C7 C8 173.7 66.0
C5 N4 C7 H71 299.0 306.0
C5 N4 C7 H72 48.4 186.0
C6 C5 N4 H51 234.7 239.9
C6 C5 N4 H52 125.2 120.1
N4 C5 C6 H61 295.7 177.0
N4 C5 C6 H62 186.2 57.1
H51 C5 N4 H52 250.5 240.1
C7 N4 C3 H31 52.2 305.0
C7 N4 C3 H32 302.7 64.9
C3 N4 C7 C5 240.0 114.0
C7 N4 C5 C6 178.5 175.1
C7 N4 C5 H51 303.7 295.1
C7 N4 C5 H52 53.2 55.0
C8 C7 N4 H71 234.7 120.0
C8 C7 N4 H72 125.3 240.0
N4 C7 C8 O8 58.7 60.0
N4 C7 C8 H81 183.9 300.0
N4 C7 C8 H82 293.4 180.0
H71 C7 N4 H72 250.6 120.0
C5 C6 N1 C9 178.2 175.1
N1 C6 C5 H61 125.3 120.0
N1 C6 C5 H62 234.7 239.9
C6 C5 N4 C7 178.5 175.1
N4 C5 C6 H51 125.3 120.1
N4 C5 C6 H52 234.7 240.0
H51 C5 C6 H52 109.4 119.9
H61 C6 C5 H62 109.4 119.9
H51 C5 N4 C7 303.7 295.1
N4 C5 H51 C6 235.4 239.8
N4 C5 H51 H52 117.7 119.9
C6 C5 H51 H52 242.3 240.1
H51 C5 C6 H61 170.4 57.0
H51 C5 C6 H62 60.9 297.0
H52 C5 N4 C7 53.2 55.0
N4 C5 H52 C6 124.6 120.2
N4 C5 H52 H51 242.2 240.1
C6 C5 H52 H51 117.7 119.9
H52 C5 C6 H61 60.9 297.1
H52 C5 C6 H62 311.5 177.2
H61 C6 N1 C9 303.5 295.1
N1 C6 H61 C5 237.2 239.8
N1 C6 H61 H62 118.7 119.9
H61 C6 C5 H51 170.4 57.0
H61 C6 C5 H52 60.9 297.1
C5 C6 H61 H62 241.4 240.1
H62 C6 N1 C9 53.0 55.0
N1 C6 H62 C5 122.8 120.2
N1 C6 H62 H61 241.3 240.1
H62 C6 C5 H51 60.9 297.0
H62 C6 C5 H52 311.5 177.2
C5 C6 H62 H61 118.6 119.9
N4 C7 C8 H71 125.3 240.1
N4 C7 C8 H72 234.7 120.1
H71 C7 C8 H72 109.4 240.0
O8 C8 C7 H81 234.8 120.0
O8 C8 C7 H82 125.3 240.0
C7 C8 O8 HO8 180.0 180.0
H81 C8 C7 H82 250.5 120.0
N4 C7 H71 C8 233.5 120.0
N4 C7 H71 H72 116.7 240.0
C8 C7 H71 H72 243.2 120.0
H71 C7 C8 O8 293.4 180.0
H71 C7 C8 H81 58.7 60.0
H71 C7 C8 H82 168.2 300.0
N4 C7 H72 C8 126.5 240.0
N4 C7 H72 H71 243.3 120.0
C8 C7 H72 H71 116.8 240.0
H72 C7 C8 O8 184.0 300.0
H72 C7 C8 H81 309.3 180.0
H72 C7 C8 H82 58.7 60.0
O8 C8 C7 H71 293.4 180.0
O8 C8 C7 H72 184.0 300.0
C7 C8 O8 H81 125.2 240.0
C7 C8 O8 H82 234.7 120.0
H81 C8 O8 H82 109.5 240.0
H81 C8 C7 H71 58.7 60.0
H81 C8 C7 H72 309.3 180.0
C7 C8 H81 O8 232.7 120.0
C7 C8 H81 H82 116.3 240.0
O8 C8 H81 H82 243.6 120.0
H81 C8 O8 HO8 54.8 300.0
H82 C8 C7 H71 168.2 300.0
H82 C8 C7 H72 58.7 60.0
C7 C8 H82 O8 127.4 240.0
C7 C8 H82 H81 243.7 120.0
O8 C8 H82 H81 116.3 240.0
H82 C8 O8 HO8 305.2 60.0
HO8 O8 C8 H81 54.8 300.0
HO8 O8 C8 H82 305.2 60.0
N1 C9 C10 H91 125.3 120.0
N1 C9 C10 H92 234.7 239.9
H91 C9 C10 H92 109.5 119.9
S C10 C9 H101 234.8 240.0
S C10 C9 H102 125.2 120.0
C9 C10 S O1S 183.9 289.8
C9 C10 S O2S 63.5 70.2
C9 C10 S O3S 303.2 179.9
H101 C10 C9 H102 250.5 240.1
N1 C9 H91 C10 236.2 240.0
N1 C9 H91 H92 118.1 120.0
C10 C9 H91 H92 241.9 240.1
H91 C9 C10 S 47.0 60.0
H91 C9 C10 H101 172.2 180.0
H91 C9 C10 H102 281.8 299.9
N1 C9 H92 C10 123.8 120.1
N1 C9 H92 H91 241.9 240.0
C10 C9 H92 H91 118.1 119.9
H92 C9 C10 S 297.5 300.0
H92 C9 C10 H101 62.7 60.1
H92 C9 C10 H102 172.3 180.0
S C10 C9 H91 47.0 60.0
S C10 C9 H92 297.5 300.0
C9 C10 S H101 125.2 120.1
C9 C10 S H102 234.8 239.9
H101 C10 S H102 109.6 119.8
O1S S C10 O2S 120.4 219.5
O1S S C10 O3S 240.7 109.8
O2S S C10 O3S 120.3 250.3
C10 S O3S HOS3 180.0 180.0
H101 C10 C9 H91 172.2 180.0
H101 C10 C9 H92 62.7 60.1
C9 C10 H101 S 236.8 239.9
C9 C10 H101 H102 118.4 120.0
S C10 H101 H102 241.6 240.1
H101 C10 S O1S 58.7 169.7
H101 C10 S O2S 298.3 310.2
H101 C10 S O3S 178.0 59.9
H102 C10 C9 H91 281.8 299.9
H102 C10 C9 H92 172.3 180.0
C9 C10 H102 S 123.2 120.1
C9 C10 H102 H101 241.6 240.0
S C10 H102 H101 118.4 119.9
H102 C10 S O1S 309.1 49.9
H102 C10 S O2S 188.7 190.4
H102 C10 S O3S 68.5 300.1
O1S S C10 H101 58.7 169.7
O1S S C10 H102 309.1 49.9
C10 S O1S O2S 243.6 135.7
C10 S O1S O3S 114.6 249.9
O2S S O1S O3S 231.0 114.2
O1S S O3S HOS3 295.0 63.7
O2S S C10 H101 298.3 310.2
O2S S C10 H102 188.7 190.4
C10 S O2S O1S 116.0 224.3
C10 S O2S O3S 244.7 110.0
O1S S O2S O3S 128.7 245.7
O2S S O3S HOS3 63.9 296.1
O3S S C10 H101 178.0 59.9
O3S S C10 H102 68.5 300.1
C10 S O3S O1S 245.0 116.3
C10 S O3S O2S 116.1 243.9
O1S S O3S O2S 231.1 127.6