PDB Chemical Component EPC

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for EPC

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C	N2	1.424	1.464
C	P2	1.676	1.822
C	CA	1.599	1.531
C	H1C1	1.115	1.090
N2	C4A	1.276	1.293
N1	C2	1.431	1.317
N1	C6	1.352	1.319
C2	C2A	1.541	1.506
C2	C3	1.402	1.387
C2A	H2A1	1.115	1.089
C2A	H2A2	1.115	1.090
C2A	H2A3	1.115	1.089
C3	O1	1.394	1.357
C3	C4	1.533	1.405
O1	HO1	0.950	0.966
C4	C4A	1.518	1.475
C4	C5	1.426	1.400
C4A	H4A1	1.103	1.080
C5	C6	1.519	1.380
C5	C5A	1.531	1.505
C6	HC61	1.103	1.080
C5A	O2	1.406	1.429
C5A	H5A1	1.115	1.089
C5A	H5A2	1.115	1.091
O2	P1	1.553	1.611
P1	O3	1.526	1.479
P1	O4	1.490	1.610
P1	O5	1.534	1.609
O4	HO4	0.950	0.967
O5	HO5	0.950	0.967
P2	O7	1.576	1.479
P2	O8	1.532	1.610
P2	O6	1.606	1.610
O8	HO8	0.950	0.967
O6	HO6	0.950	0.967
CA	HCA1	1.115	1.090
CA	HCA2	1.115	1.090
CA	HCA3	1.115	1.090

Bond Angles for EPC

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
N2	C	P2	111.4	109.5
N2	C	CA	112.6	109.4
N2	C	H1C1	107.0	109.5
C	N2	C4A	127.2	120.0
P2	C	CA	112.4	109.4
P2	C	H1C1	107.2	109.5
C	P2	O7	109.6	109.5
C	P2	O8	106.6	109.5
C	P2	O6	110.0	109.4
CA	C	H1C1	105.9	109.4
C	CA	HCA1	111.1	109.4
C	CA	HCA2	112.6	109.5
C	CA	HCA3	111.1	109.4
N2	C4A	C4	119.4	120.0
N2	C4A	H4A1	111.8	120.0
C2	N1	C6	123.4	122.2
N1	C2	C2A	120.0	119.6
N1	C2	C3	119.4	120.8
N1	C6	C5	120.6	121.1
N1	C6	HC61	113.9	119.5
C2A	C2	C3	120.5	119.6
C2	C2A	H2A1	108.4	109.5
C2	C2A	H2A2	120.0	109.5
C2	C2A	H2A3	108.5	109.5
C2	C3	O1	119.1	120.6
C2	C3	C4	120.2	118.9
H2A1	C2A	H2A2	108.4	109.4
H2A1	C2A	H2A3	101.5	109.5
H2A2	C2A	H2A3	108.4	109.5
O1	C3	C4	120.7	120.5
C3	O1	HO1	119.1	106.8
C3	C4	C4A	118.8	121.0
C3	C4	C5	118.4	118.1
C4A	C4	C5	122.8	121.0
C4	C4A	H4A1	128.7	120.0
C4	C5	C6	117.9	119.0
C4	C5	C5A	122.6	120.5
C6	C5	C5A	119.5	120.5
C5	C6	HC61	125.5	119.4
C5	C5A	O2	106.5	109.5
C5	C5A	H5A1	113.3	109.5
C5	C5A	H5A2	113.3	109.5
O2	C5A	H5A1	113.3	109.5
O2	C5A	H5A2	113.3	109.4
C5A	O2	P1	112.0	106.8
H5A1	C5A	H5A2	97.1	109.4
O2	P1	O3	108.1	109.5
O2	P1	O4	114.6	109.5
O2	P1	O5	105.0	109.5
O3	P1	O4	110.3	109.5
O3	P1	O5	114.6	109.4
O4	P1	O5	104.3	109.5
P1	O4	HO4	114.6	106.8
P1	O5	HO5	105.1	106.8
O7	P2	O8	113.4	109.5
O7	P2	O6	112.4	109.5
O8	P2	O6	104.6	109.5
P2	O8	HO8	106.6	106.8
P2	O6	HO6	110.0	106.8
HCA1	CA	HCA2	111.1	109.5
HCA1	CA	HCA3	99.3	109.5
HCA2	CA	HCA3	111.0	109.5

Torsion Angles for EPC

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
P2	C	N2	CA	232.7	240.0
P2	C	N2	H1C1	116.8	120.1
N2	C	P2	O7	312.2	60.0
N2	C	P2	O8	75.3	180.0
N2	C	P2	O6	188.1	300.0
CA	C	N2	H1C1	244.1	240.0
N2	C	CA	HCA1	54.7	300.0
N2	C	CA	HCA2	180.0	60.0
N2	C	CA	HCA3	305.3	180.0
C	N2	C4A	C4	191.3	180.0
C	N2	C4A	H4A1	11.3	360.0
N2	C	P2	CA	127.4	120.0
N2	C	P2	H1C1	243.3	239.9
P2	C	N2	C4A	200.4	120.0
CA	C	P2	H1C1	115.9	120.0
P2	C	CA	HCA1	181.5	60.0
P2	C	CA	HCA2	306.8	180.0
P2	C	CA	HCA3	72.0	300.0
O7	P2	C	O8	236.9	240.0
O7	P2	C	O6	124.0	120.0
O8	P2	C	O6	247.2	240.0
C	P2	O8	HO8	180.0	179.9
C	P2	O6	HO6	180.0	300.0
N2	C	CA	P2	233.2	240.0
N2	C	CA	H1C1	116.5	120.0
CA	C	N2	C4A	327.6	240.0
P2	C	CA	H1C1	243.3	240.0
CA	C	P2	O7	184.7	300.0
CA	C	P2	O8	307.9	60.0
CA	C	P2	O6	60.7	180.0
HCA1	CA	C	HCA2	234.7	240.0
HCA1	CA	C	HCA3	109.5	120.0
HCA2	CA	C	HCA3	234.8	240.0
N2	C	H1C1	P2	119.6	120.1
N2	C	H1C1	CA	239.7	240.0
H1C1	C	N2	C4A	83.5	360.0
P2	C	H1C1	CA	120.1	120.0
H1C1	C	P2	O7	68.9	180.0
H1C1	C	P2	O8	192.0	300.1
H1C1	C	P2	O6	304.8	60.0
H1C1	C	CA	HCA1	298.2	180.0
H1C1	C	CA	HCA2	63.5	300.0
H1C1	C	CA	HCA3	188.7	60.0
C4A	N2	C	P2	200.4	120.0
C4A	N2	C	CA	327.6	240.0
C4A	N2	C	H1C1	83.5	360.0
C3	C4	C4A	N2	0.1	0.0
N2	C4A	C4	C5	177.5	179.7
C4	C4A	N2	H4A1	180.0	180.0
C2	N1	C6	C5	359.5	359.7
C2	N1	C6	HC61	179.5	180.0
C2A	C2	N1	C3	177.9	179.9
N1	C2	C2A	H2A1	54.7	270.0
N1	C2	C2A	H2A2	180.0	30.0
N1	C2	C2A	H2A3	305.3	150.0
N1	C2	C3	O1	179.1	179.9
N1	C2	C3	C4	0.7	359.9
C6	N1	C2	C2A	177.3	179.9
C6	N1	C2	C3	359.4	0.0
C4	C5	C6	N1	1.3	0.6
N1	C6	C5	C5A	182.4	180.0
C5	C6	N1	HC61	180.0	179.7
C2A	C2	N1	C6	177.3	179.9
N1	C2	C2A	C3	182.2	180.1
C2A	C2	C3	O1	1.3	0.0
C2A	C2	C3	C4	182.9	180.0
H2A1	C2A	C2	H2A2	234.7	240.0
H2A1	C2A	C2	H2A3	109.4	120.0
H2A2	C2A	C2	H2A3	234.7	240.0
C3	C2	N1	C6	359.4	0.0
N1	C2	C3	C2A	177.9	179.9
C3	C2	C2A	H2A1	232.6	89.9
C3	C2	C2A	H2A2	357.8	209.9
C3	C2	C2A	H2A3	123.1	329.9
O1	C3	C2	C4	178.4	180.0
C2	C3	O1	HO1	180.0	270.0
C2	C3	C4	C4A	177.6	180.0
C2	C3	C4	C5	0.1	0.3
H2A1	C2A	C2	C3	232.6	89.9
C2	C2A	H2A1	H2A2	131.9	120.0
C2	C2A	H2A1	H2A3	245.9	240.0
H2A2	C2A	H2A1	H2A3	114.0	120.0
H2A2	C2A	C2	C3	357.8	209.9
C2	C2A	H2A2	H2A1	234.7	240.0
C2	C2A	H2A2	H2A3	125.3	120.0
H2A1	C2A	H2A2	H2A3	250.6	240.0
H2A3	C2A	C2	C3	123.1	329.9
C2	C2A	H2A3	H2A1	114.1	120.0
C2	C2A	H2A3	H2A2	228.1	240.0
H2A1	C2A	H2A3	H2A2	114.1	119.9
C2	C3	O1	C4	181.6	180.0
O1	C3	C4	C4A	359.2	0.0
O1	C3	C4	C5	181.7	180.3
N2	C4A	C4	C3	0.1	0.0
C2	C3	C4	O1	178.4	180.0
C4	C3	O1	HO1	358.4	90.0
C4A	C4	C3	C5	177.5	179.7
C3	C4	C4A	H4A1	180.1	180.0
C3	C4	C5	C6	359.0	359.4
C3	C4	C5	C5A	177.8	180.0
HO1	O1	C3	C4	358.4	90.0
N2	C4A	C4	H4A1	180.0	180.0
C3	C4	C4A	C5	182.6	180.3
C4A	C4	C5	C6	181.6	179.7
C4A	C4	C5	C5A	0.4	0.3
N1	C6	C5	C4	1.3	0.6
C3	C4	C5	C4A	177.4	179.7
C5	C4	C4A	H4A1	357.5	359.7
C6	C5	C4	C5A	181.2	179.4
C4	C5	C6	HC61	181.3	180.3
C4	C5	C5A	O2	67.3	179.4
C4	C5	C5A	H5A1	302.1	299.5
C4	C5	C5A	H5A2	192.6	59.4
N2	C4A	H4A1	C4	180.0	180.0
H4A1	C4A	C4	C5	357.5	359.7
N1	C6	C5	HC61	180.0	180.3
C4	C5	C6	C5A	178.8	180.6
C6	C5	C5A	O2	246.1	0.0
C6	C5	C5A	H5A1	120.9	120.1
C6	C5	C5A	H5A2	11.4	240.0
C4	C5	C5A	C6	181.2	179.4
C5A	C5	C6	HC61	2.4	359.7
O2	C5A	C5	H5A1	125.3	239.9
O2	C5A	C5	H5A2	234.7	120.0
C5	C5A	O2	P1	186.3	180.0
H5A1	C5A	C5	H5A2	109.5	240.0
N1	C6	HC61	C5	180.0	179.7
HC61	C6	C5	C5A	2.4	359.7
C5	C5A	O2	H5A1	234.7	120.1
C5	C5A	O2	H5A2	125.3	240.0
H5A1	C5A	O2	H5A2	250.6	119.9
C5A	O2	P1	O3	177.1	60.0
C5A	O2	P1	O4	300.5	180.0
C5A	O2	P1	O5	54.3	300.1
C5	C5A	H5A1	O2	121.5	239.9
C5	C5A	H5A1	H5A2	240.7	120.0
O2	C5A	H5A1	H5A2	119.2	240.1
H5A1	C5A	O2	P1	311.5	59.9
C5	C5A	H5A2	O2	238.5	120.0
C5	C5A	H5A2	H5A1	119.3	240.0
O2	C5A	H5A2	H5A1	240.8	120.0
H5A2	C5A	O2	P1	61.0	300.0
P1	O2	C5A	H5A1	311.5	59.9
P1	O2	C5A	H5A2	61.0	300.0
O3	P1	O2	O4	236.6	240.0
O3	P1	O2	O5	122.8	120.0
O4	P1	O2	O5	246.2	240.0
O2	P1	O4	HO4	180.0	180.0
O2	P1	O5	HO5	180.0	300.0
O2	P1	O3	O4	126.0	120.0
O2	P1	O3	O5	243.3	240.0
O4	P1	O3	O5	117.3	120.0
O3	P1	O4	HO4	302.2	300.0
O3	P1	O5	HO5	61.5	180.1
O2	P1	O4	O3	237.8	240.0
O2	P1	O4	O5	114.2	120.0
O3	P1	O4	O5	236.5	240.0
O4	P1	O5	HO5	300.9	60.0
O2	P1	O5	O3	118.5	120.0
O2	P1	O5	O4	239.2	240.0
O3	P1	O5	O4	120.7	120.0
O5	P1	O4	HO4	65.7	60.0
HO4	O4	P1	O5	65.7	60.0
O7	P2	C	CA	184.7	300.0
O7	P2	C	H1C1	68.9	180.0
C	P2	O7	O8	119.0	120.0
C	P2	O7	O6	237.3	240.1
O8	P2	O7	O6	118.3	120.0
O7	P2	O8	HO8	300.7	300.0
O7	P2	O6	HO6	57.6	180.0
O8	P2	C	CA	307.9	60.0
O8	P2	C	H1C1	192.0	300.1
C	P2	O8	O7	239.3	240.0
C	P2	O8	O6	116.5	119.9
O7	P2	O8	O6	237.3	240.0
O8	P2	O6	HO6	294.1	59.9
O6	P2	C	CA	60.7	180.0
O6	P2	C	H1C1	304.8	60.0
C	P2	O6	O7	122.4	120.0
C	P2	O6	O8	245.8	240.1
O7	P2	O6	O8	123.4	120.1
O6	P2	O8	HO8	63.5	60.0
HO8	O8	P2	O6	63.5	60.0
HCA1	CA	C	H1C1	298.2	180.0
C	CA	HCA1	HCA2	126.1	120.0
C	CA	HCA1	HCA3	243.1	240.0
HCA2	CA	HCA1	HCA3	116.9	120.0
HCA2	CA	C	H1C1	63.5	300.0
C	CA	HCA2	HCA1	234.7	240.0
C	CA	HCA2	HCA3	125.3	119.9
HCA1	CA	HCA2	HCA3	250.5	239.9
HCA3	CA	C	H1C1	188.7	60.0
C	CA	HCA3	HCA1	116.9	120.0
C	CA	HCA3	HCA2	233.9	240.0
HCA1	CA	HCA3	HCA2	117.0	120.1