PDB Chemical Component EMO

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for EMO

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 O1 1.392 1.356
C1 C2 1.431 1.389
C1 C20 1.468 1.399
O1 HO1 0.950 0.966
C2 C3 1.427 1.385
C2 H2 1.103 1.080
C3 O3 1.391 1.357
C3 C4 1.438 1.392
O3 HO3 0.951 0.966
C4 C5 1.436 1.390
C4 H4 1.103 1.080
C5 C6 1.544 1.477
C5 C20 1.464 1.408
C6 O6 1.227 1.215
C6 C7 1.548 1.478
C7 C8 1.457 1.391
C7 C18 1.460 1.406
C8 C9 1.452 1.386
C8 H8 1.104 1.080
C9 C10 1.498 1.507
C9 C16 1.429 1.379
C10 H101 1.114 1.090
C10 H102 1.115 1.090
C10 H103 1.115 1.090
C16 C17 1.428 1.392
C16 H16 1.102 1.080
C17 O17 1.421 1.356
C17 C18 1.440 1.398
O17 H17 0.950 0.966
C18 C19 1.540 1.474
C19 O19 1.224 1.216
C19 C20 1.544 1.472

Bond Angles for EMO

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O1 C1 C2 115.2 120.0
O1 C1 C20 124.7 120.1
C1 O1 HO1 115.2 106.8
C2 C1 C20 120.1 119.9
C1 C2 C3 119.6 120.3
C1 C2 H2 120.3 119.9
C1 C20 C5 119.6 119.7
C1 C20 C19 120.3 120.2
C3 C2 H2 120.0 119.9
C2 C3 O3 120.6 119.8
C2 C3 C4 121.3 120.4
O3 C3 C4 118.1 119.8
C3 O3 HO3 120.7 106.8
C3 C4 C5 120.5 120.0
C3 C4 H4 119.8 120.0
C5 C4 H4 119.7 120.0
C4 C5 C6 120.5 120.3
C4 C5 C20 118.9 119.7
C6 C5 C20 120.6 120.0
C5 C6 O6 120.5 120.1
C5 C6 C7 119.1 119.8
C5 C20 C19 120.0 120.1
O6 C6 C7 120.4 120.1
C6 C7 C8 120.8 120.3
C6 C7 C18 120.1 120.0
C8 C7 C18 119.1 119.7
C7 C8 C9 120.2 120.1
C7 C8 H8 120.1 120.0
C7 C18 C17 118.9 119.6
C7 C18 C19 120.7 120.2
C9 C8 H8 119.7 120.0
C8 C9 C10 124.4 119.7
C8 C9 C16 120.1 120.5
C10 C9 C16 115.4 119.7
C9 C10 H101 124.5 109.5
C9 C10 H102 106.9 109.5
C9 C10 H103 106.9 109.5
C9 C16 C17 119.7 120.3
C9 C16 H16 120.2 119.8
H101 C10 H102 106.9 109.4
H101 C10 H103 106.9 109.5
H102 C10 H103 102.7 109.5
C17 C16 H16 120.1 119.9
C16 C17 O17 116.6 120.1
C16 C17 C18 121.9 119.8
O17 C17 C18 121.5 120.2
C17 O17 H17 116.5 106.8
C17 C18 C19 120.3 120.2
C18 C19 O19 120.9 120.0
C18 C19 C20 119.4 120.0
O19 C19 C20 119.7 120.0

Torsion Angles for EMO

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 C1 O1 C20 180.1 180.0
O1 C1 C2 C3 180.0 180.0
O1 C1 C2 H2 360.0 360.0
O1 C1 C20 C5 179.9 180.0
O1 C1 C20 C19 359.9 0.1
O1 C1 C2 C20 179.9 180.0
C2 C1 O1 HO1 180.0 270.0
C2 C1 C20 C5 359.8 360.0
C2 C1 C20 C19 179.8 180.0
C3 C2 C1 H2 180.0 180.0
C1 C2 C3 O3 180.1 180.1
C1 C2 C3 C4 0.2 0.0
O1 C1 C20 C2 180.1 180.0
C20 C1 O1 HO1 359.8 90.0
C20 C1 C2 C3 0.1 360.0
C20 C1 C2 H2 180.1 180.0
C4 C5 C20 C1 0.1 0.0
C6 C5 C20 C1 179.7 180.1
C5 C20 C1 C19 180.1 180.0
C18 C19 C20 C1 180.8 179.9
O19 C19 C20 C1 359.8 359.9
HO1 O1 C1 C2 180.0 270.0
HO1 O1 C1 C20 359.8 90.0
C3 C2 C1 C20 0.1 360.0
C1 C2 C3 H2 180.0 180.0
O3 C3 C2 C4 179.9 180.0
C2 C3 O3 HO3 180.0 90.0
C2 C3 C4 C5 359.7 0.0
C2 C3 C4 H4 179.7 180.0
H2 C2 C1 C20 180.1 180.0
C1 C2 H2 C3 180.0 180.0
H2 C2 C3 O3 0.1 0.0
H2 C2 C3 C4 180.1 180.0
O3 C3 C2 H2 0.1 0.0
C2 C3 O3 C4 180.1 180.0
O3 C3 C4 C5 179.8 180.0
O3 C3 C4 H4 359.8 359.9
C4 C3 C2 H2 180.1 180.0
C2 C3 C4 O3 179.9 180.0
C4 C3 O3 HO3 359.9 270.0
C5 C4 C3 H4 180.0 180.0
C3 C4 C5 C6 180.5 179.9
C3 C4 C5 C20 0.1 360.0
HO3 O3 C3 C4 359.9 270.0
C1 C20 C5 C4 0.1 0.0
C3 C4 C5 H4 180.0 180.0
C6 C5 C4 C20 180.3 179.9
C4 C5 C6 O6 359.6 0.1
C4 C5 C6 C7 180.0 180.0
C4 C5 C20 C19 180.1 180.0
C3 C4 H4 C5 180.0 180.0
H4 C4 C5 C6 0.5 360.0
H4 C4 C5 C20 180.1 180.0
C1 C20 C5 C6 179.7 180.1
C6 C5 C4 H4 0.5 360.0
C4 C5 C6 C20 179.6 180.1
C6 C5 C20 C19 359.8 0.0
O6 C6 C5 C7 179.6 180.1
C5 C6 C7 C8 180.6 180.2
C5 C6 C7 C18 359.0 0.1
C1 C20 C5 C19 179.9 180.0
C20 C5 C4 H4 180.1 180.0
C4 C5 C20 C6 180.3 179.9
C20 C5 C6 O6 180.0 180.0
C20 C5 C6 C7 0.4 359.9
C18 C19 C20 C5 0.7 360.0
O19 C19 C20 C5 179.7 180.0
O6 C6 C5 C20 180.0 180.0
C5 C6 O6 C7 180.4 179.9
O6 C6 C7 C8 0.9 0.1
O6 C6 C7 C18 179.3 180.0
C7 C6 C5 C20 0.4 359.9
C5 C6 C7 O6 179.6 180.1
C8 C7 C6 C18 181.6 180.1
C6 C7 C8 C9 179.6 180.3
C6 C7 C8 H8 359.5 0.1
C6 C7 C18 C17 180.2 180.0
C6 C7 C18 C19 1.6 359.9
C6 C7 C8 C18 178.4 179.9
C8 C7 C18 C17 358.6 359.9
C8 C7 C18 C19 180.0 179.8
C9 C8 C7 H8 180.0 180.2
C7 C8 C9 C10 179.3 179.8
C7 C8 C9 C16 359.1 359.6
C6 C7 C18 C8 181.6 180.1
C18 C7 C8 C9 1.1 0.3
C18 C7 C8 H8 181.1 180.2
C16 C17 C18 C7 1.4 360.0
O17 C17 C18 C7 180.5 179.9
C17 C18 C7 C19 178.6 180.1
C7 C18 C19 O19 179.6 180.0
C7 C18 C19 C20 358.6 0.1
C9 C8 C7 C18 1.1 0.3
C7 C8 C9 H8 180.0 179.8
C10 C9 C8 C16 180.1 180.3
C8 C9 C10 H101 180.0 269.8
C8 C9 C10 H102 305.3 29.8
C8 C9 C10 H103 54.7 149.8
C8 C9 C16 C17 0.8 0.3
C8 C9 C16 H16 180.8 180.2
H8 C8 C7 C18 181.1 180.2
C7 C8 H8 C9 180.0 180.2
H8 C8 C9 C10 359.3 360.0
H8 C8 C9 C16 179.2 179.7
C10 C9 C8 H8 359.3 360.0
C8 C9 C10 C16 179.9 179.7
C10 C9 C16 C17 180.7 180.0
C10 C9 C16 H16 0.7 360.0
H101 C10 C9 H102 234.7 240.0
H101 C10 C9 H103 125.3 120.0
H102 C10 C9 H103 250.6 240.0
C16 C9 C8 H8 179.2 179.7
C8 C9 C16 C10 180.1 180.3
C16 C9 C10 H101 0.1 90.1
C16 C9 C10 H102 125.4 210.0
C16 C9 C10 H103 234.8 330.0
C17 C16 C9 H16 180.0 180.1
C9 C16 C17 O17 179.8 180.0
C9 C16 C17 C18 358.9 360.0
H101 C10 C9 C16 0.1 90.1
C9 C10 H101 H102 125.3 120.0
C9 C10 H101 H103 234.7 240.0
H102 C10 H101 H103 109.4 120.0
H102 C10 C9 C16 125.4 210.0
C9 C10 H102 H101 224.7 240.0
C9 C10 H102 H103 112.3 120.0
H101 C10 H102 H103 247.6 240.0
H103 C10 C9 C16 234.8 330.0
C9 C10 H103 H101 135.3 120.0
C9 C10 H103 H102 247.6 240.0
H101 C10 H103 H102 112.3 120.0
C7 C18 C17 C16 1.4 360.0
C9 C16 C17 H16 180.0 179.9
O17 C17 C16 C18 180.8 180.0
C16 C17 O17 H17 180.0 90.0
C16 C17 C18 C19 180.0 180.0
C9 C16 H16 C17 180.0 180.1
H16 C16 C17 O17 359.8 0.1
H16 C16 C17 C18 178.9 180.0
C7 C18 C17 O17 180.5 179.9
O17 C17 C16 H16 359.8 0.1
C16 C17 O17 C18 179.2 180.0
O17 C17 C18 C19 359.1 360.0
C7 C18 C17 C19 181.4 179.9
C18 C17 C16 H16 178.9 180.0
C16 C17 C18 O17 180.9 180.0
C18 C17 O17 H17 0.9 270.1
C17 C18 C19 O19 1.0 360.0
C17 C18 C19 C20 180.0 180.0
H17 O17 C17 C18 0.9 270.1
C1 C20 C19 C18 180.8 179.9
C5 C20 C19 C18 0.7 360.0
C7 C18 C19 C17 178.6 180.1
O19 C19 C18 C20 181.0 180.0
C1 C20 C19 O19 359.8 359.9
C5 C20 C19 O19 179.7 180.0
C18 C19 O19 C20 179.0 180.0
C1 C20 C19 C5 180.1 180.0
C18 C19 C20 O19 181.0 180.0