PDB Chemical Component EJ4

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for EJ4

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
CAK CAL 1.392 1.384
CAK CAJ 1.386 1.386
CAL CAM 1.334 1.394
CAJ CAI 1.388 1.372
CAM NAN 1.333 1.364
CAM CAH 1.333 1.419
NAN CAF 1.337 1.372
CAI CAH 1.336 1.398
CAH CAG 1.332 1.448
CAF CAG 1.356 1.350
CAF CAE 1.421 1.507
CAG CAO 1.378 1.506
CAE OAD 1.493 1.455
CAE CAV 1.484 1.526
OAD CAC 1.394 1.351
CAO CAP 1.548 1.535
OAQ CAP 1.440 1.428
CAP CAV 1.378 1.522
CAP CAR 1.532 1.536
CAV CAW 1.369 1.508
CAV CAU 1.539 1.526
CAC CAW 1.305 1.386
CAC CAB 1.341 1.401
OAA CAB 1.363 1.359
CAW CAX 1.344 1.377
CAU CAT 1.483 1.532
CAB CAZ 1.405 1.393
CAR CBA 1.607 1.521
CAR NAS 1.494 1.468
CAX CBA 1.450 1.494
CAX CAY 1.389 1.384
CAZ CAY 1.404 1.386
NAS CAT 1.481 1.468
NAS CBB 1.484 1.469
CBB CBC 1.564 1.531
CBD CBC 1.537 1.530
CBD CBE 1.523 1.530
CBC CBE 1.529 1.530
CAE H1 1.100 1.090
CAI H2 1.080 1.081
CAJ H3 1.080 1.081
CAK H4 1.080 1.080
CAL H5 1.081 1.080
CAO H6 1.100 1.090
CAO H7 1.099 1.089
CAR H8 1.100 1.090
CAT H9 1.100 1.091
CAT H10 1.100 1.090
CAU H11 1.100 1.091
CAU H12 1.100 1.090
CAY H13 1.080 1.079
CAZ H14 1.080 1.079
NAN H15 1.000 0.970
OAA H17 0.950 0.967
OAQ H18 0.950 0.967
CBA H19 1.100 1.090
CBA H20 1.100 1.090
CBB H21 1.100 1.090
CBB H22 1.100 1.090
CBC H23 1.100 1.089
CBD H24 1.099 1.090
CBD H25 1.100 1.091
CBE H26 1.100 1.090
CBE H27 1.100 1.090

Bond Angles for EJ4

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
CAK CAL CAM 120.5 116.9
CAL CAK H4 120.5 118.9
CAK CAL H5 119.7 121.5
CAK CAJ H3 121.1 118.9
CAL CAM NAN 131.8 132.2
CAM CAL H5 119.7 121.5
CAJ CAI H2 119.5 121.6
CAM NAN H15 125.2 125.0
CAH CAG CAO 131.3 128.5
CAF CAG CAO 117.6 124.2
CAF CAE OAD 106.2 108.1
CAF CAE CAV 105.0 110.9
CAF CAE H1 117.8 111.9
CAG CAO CAP 113.1 108.7
CAG CAO H6 108.6 109.6
CAG CAO H7 108.6 109.6
CAV CAE OAD 91.4 102.6
OAD CAE H1 116.3 111.5
CAE CAV CAP 112.8 117.8
CAE CAV CAW 113.0 101.2
CAE CAV CAU 98.0 111.1
CAV CAE H1 116.5 111.4
CAO CAP CAV 99.7 110.1
CAO CAP CAR 109.6 108.0
CAP CAO H6 108.5 109.6
CAP CAO H7 108.5 109.6
CAR CAP CAV 113.4 107.2
CAP CAV CAW 114.9 105.1
CAP CAV CAU 112.3 110.7
CAP CAR CBA 97.8 113.9
CAP CAR NAS 104.3 109.6
CAP CAR H8 113.3 107.9
CAC CAW CAV 101.5 107.9
CAV CAW CAX 123.7 126.3
CAV CAU H11 110.3 109.5
CAV CAU H12 110.3 109.6
CAC CAW CAX 129.5 125.7
CAC CAB CAZ 121.0 116.9
CAW CAX CBA 113.7 119.4
CAW CAX CAY 116.5 115.8
CAU CAT H9 109.8 109.5
CAU CAT H10 109.8 109.5
CAB CAZ CAY 121.6 123.3
CAB CAZ H14 119.2 118.4
NAS CAR CBA 114.0 110.3
CAR CBA CAX 119.7 113.6
CBA CAR H8 112.2 107.9
CAR CBA H19 106.9 108.7
CAR CBA H20 106.8 108.7
CAR NAS CAT 112.8 111.5
CAR NAS CBB 109.6 111.0
NAS CAR H8 113.9 107.0
CAY CAX CBA 128.9 124.9
CAX CBA H19 106.8 108.6
CAX CBA H20 106.9 108.6
CAX CAY H13 122.4 119.9
CAZ CAY H13 122.4 119.8
NAS CAT H9 109.7 109.5
NAS CAT H10 109.8 109.5
NAS CBB CBC 118.7 109.5
NAS CBB H21 107.1 109.5
NAS CBB H22 107.1 109.5
CBB CBC CBE 115.7 117.5
CBC CBB H21 107.1 109.5
CBC CBB H22 107.1 109.5
CBB CBC H23 114.7 115.5
CBD CBC CBE 59.6 60.0
CBD CBC H23 115.2 117.6
CBC CBE CBD 60.5 60.0
CBE CBD H24 120.0 117.5
CBE CBD H25 120.0 117.5
CBD CBE H26 119.9 117.5
CBD CBE H27 119.9 117.5
CBE CBC H23 115.3 117.5
CBC CBE H26 119.9 117.5
CBC CBE H27 119.9 117.5
H6 CAO H7 109.5 109.7
H9 CAT H10 109.5 109.5
H11 CAU H12 109.5 109.6
H19 CBA H20 109.5 108.5
H21 CBB H22 109.5 109.5
H24 CBD H25 109.5 115.5
H26 CBE H27 109.5 115.6

Torsion Angles for EJ4

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
CAL CAK CAJ H3 180.0 180.0
CAK CAL CAM NAN 179.9 180.1
CAM CAL CAK H5 180.0 179.9
CAK CAJ CAI H2 180.0 180.0
CAM CAL CAK H4 180.1 180.0
CAK CAL CAM H5 180.0 180.1
CAL CAM NAN H15 3.3 0.2
NAN CAM CAL H5 359.9 359.9
CAM CAH CAG CAO 188.6 180.2
NAN CAF CAE OAD 285.1 290.1
NAN CAF CAE H1 57.5 53.2
CAI CAH CAG CAO 12.7 0.1
CAF CAG CAH CAO 162.2 179.8
CAH CAG CAO CAP 194.4 207.3
CAH CAG CAO H6 315.0 327.1
CAH CAG CAO H7 73.9 87.5
CAH CAG CAF CAO 195.0 180.2
CAG CAF CAE OAD 123.5 110.0
CAG CAF CAE CAV 27.5 358.2
CAG CAF CAE H1 255.9 233.1
CAF CAG CAO CAP 33.5 27.5
CAF CAG CAO H6 154.0 147.3
CAF CAG CAO H7 273.0 267.7
CAV CAE CAF OAD 264.1 248.2
OAD CAE CAF H1 227.5 236.9
CAF CAE CAV CAP 300.1 333.8
CAF CAE CAV CAW 72.6 87.6
CAF CAE CAV CAU 181.8 204.6
CAV CAE CAF H1 131.6 125.1
CAG CAO CAP CAV 301.2 308.6
CAG CAO CAP CAR 181.9 191.8
CAP CAO CAG H6 239.5 240.2
CAP CAO CAG H7 120.5 119.8
H6 CAO CAG H7 241.1 239.5
CAF CAE OAD CAV 254.0 242.8
CAF CAE OAD H1 133.2 123.4
OAD CAE CAV CAP 192.9 218.5
OAD CAE CAV CAW 325.5 332.4
OAD CAE CAV CAU 74.6 89.4
CAV CAE OAD H1 239.3 240.7
CAF CAE CAV OAD 107.2 115.3
CAF CAE CAV H1 227.7 234.6
OAD CAE CAV H1 120.5 119.4
CAO CAP CAV CAE 74.1 54.5
CAR CAP CAV CAE 190.5 171.8
CAP CAV CAE CAW 227.5 246.1
CAP CAV CAE CAU 118.3 129.1
CAC CAW CAV CAE 37.5 20.0
CAE CAV CAW CAX 193.8 203.5
CAE CAV CAU H11 297.9 71.0
CAE CAV CAU H12 59.0 310.8
CAG CAO CAP H6 120.5 119.8
CAG CAO CAP H7 239.5 240.2
CAE CAV CAP CAO 74.1 54.5
CAR CAP CAO CAV 240.7 243.2
CAO CAP CAV CAW 302.5 302.8
CAO CAP CAV CAU 183.6 183.8
CAO CAP CAR CBA 49.8 54.9
CAO CAP CAR NAS 167.1 179.0
CAO CAP CAR H8 291.5 295.2
H6 CAO CAP H7 118.9 120.4
OAQ CAP CAO H6 299.1 310.6
OAQ CAP CAO H7 180.2 190.2
OAQ CAP CAR CBA 172.5 175.8
OAQ CAP CAR H8 54.2 56.1
CAP CAV CAE OAD 192.9 218.5
CAE CAV CAP CAW 131.6 111.7
CAE CAV CAP CAU 250.4 230.7
CAP CAV CAE H1 72.4 99.1
CAO CAP CAV CAR 243.6 242.7
CAV CAP CAO H6 180.6 188.8
CAV CAP CAO H7 61.7 68.4
CAV CAP CAR CBA 299.4 296.2
CAV CAP CAR NAS 56.7 60.3
CAV CAP CAR H8 181.1 176.5
CAC CAW CAV CAP 169.0 143.0
CAP CAV CAW CAX 325.3 326.6
CAP CAV CAU H11 179.2 298.2
CAP CAV CAU H12 300.2 178.0
CAE CAV CAP CAR 190.5 171.8
CAO CAP CAR CAV 110.4 118.7
CAR CAP CAO H6 61.3 72.0
CAR CAP CAO H7 302.4 311.6
CAR CAP CAV CAW 58.9 60.1
CAR CAP CAV CAU 300.1 301.1
NAS CAR CAP CBA 117.3 124.1
CAP CAR CBA CAX 48.4 31.2
CBA CAR CAP H8 118.3 119.7
CAP CAR CBA H19 169.9 152.3
CAP CAR CBA H20 287.0 270.2
CAP CAR NAS CAT 301.4 297.0
CAP CAR NAS CBB 193.5 172.7
NAS CAR CAP H8 235.6 243.8
CAW CAV CAE OAD 325.5 332.4
CAE CAV CAW CAP 228.5 236.9
CAE CAV CAW CAU 105.2 117.6
CAW CAV CAE H1 204.9 213.0
CAP CAV CAW CAU 236.7 240.7
CAW CAV CAU H11 54.2 182.3
CAW CAV CAU H12 175.2 62.1
CAC CAW CAV CAX 203.7 176.4
CAV CAW CAX CBA 20.4 2.2
CAV CAW CAX CAY 190.9 181.0
CAU CAV CAE OAD 74.6 89.4
CAE CAV CAU CAP 118.7 132.8
CAE CAV CAU CAW 243.7 248.7
CAU CAV CAE H1 314.1 330.0
CAP CAV CAU CAW 125.0 115.9
CAC CAW CAV CAU 292.2 262.4
CAV CAU CAT H9 60.4 62.8
CAV CAU CAT H10 180.8 182.8
H11 CAU CAV H12 239.0 120.2
CAE CAV CAW CAC 37.5 20.0
CAP CAV CAW CAC 169.0 143.0
CAV CAW CAC CAX 154.3 183.5
CAW CAC CAB CAZ 347.2 1.8
CAC CAW CAX CBA 169.7 186.4
CAC CAW CAX CAY 340.2 5.2
CAC CAB CAZ CAY 3.3 1.0
CAC CAB CAZ H14 183.3 181.1
OAA CAB CAZ H14 359.4 1.4
CAC CAW CAX CAV 149.3 184.2
CAR CBA CAX CAW 329.0 359.8
CAY CAX CAW CBA 170.4 178.8
CAW CAX CBA H19 207.5 238.7
CAW CAX CBA H20 90.4 120.9
CAW CAX CAY H13 186.6 177.9
CAE CAV CAU CAT 178.4 190.9
CAP CAV CAU CAT 59.7 58.1
CAR NAS CAT CAU 64.9 60.8
NAS CAT CAU H9 240.2 240.0
NAS CAT CAU H10 119.8 120.0
H9 CAT CAU H10 239.6 240.0
CAB CAZ CAY H13 180.1 179.2
CBA CAR CAP CAV 299.4 296.2
CAP CAR CBA NAS 109.5 123.7
CAP CAR CBA H8 240.8 240.3
CAW CAX CBA CAR 329.0 359.8
CBA CAR NAS CAT 46.9 63.2
CBA CAR NAS CBB 299.0 298.8
NAS CAR CBA H8 131.3 116.6
CAY CAX CBA CAR 160.0 181.1
CAX CBA CAR H19 238.6 239.0
CAX CBA CAR H20 121.4 121.1
H19 CBA CAR H20 242.9 242.1
NAS CAR CAP CAV 56.7 60.3
CAP CAR NAS CBA 254.5 233.8
CAP CAR NAS H8 124.0 116.7
NAS CAR CBA CAX 298.9 267.5
CBA CAR NAS H8 229.5 242.9
NAS CAR CBA H19 60.4 28.6
NAS CAR CBA H20 177.5 146.5
CAR NAS CAT H9 305.1 300.8
CAR NAS CAT H10 184.7 180.8
CAR NAS CBB CBC 290.4 190.0
CAR NAS CBB H21 51.7 310.0
CAR NAS CBB H22 169.1 70.0
CAW CAX CBA CAY 169.0 178.7
CAX CBA CAR H8 167.6 151.0
CAR CBA CAX H19 121.5 121.1
CAR CBA CAX H20 238.6 238.9
CBA CAX CAY H13 355.3 356.6
H19 CBA CAX H20 117.1 117.9
CAW CAX CAY CBA 191.3 181.3
CAB CAZ CAY CAX 0.1 359.1
CAR CBA CAX CAY 160.0 181.1
CAY CAX CBA H19 38.5 60.0
CAY CAX CBA H20 281.4 302.2
CAZ CAY CAX H13 180.0 180.1
CAB CAZ CAY H14 180.0 180.1
CAZ CAY CAX CBA 175.3 176.7
CAX CAY CAZ H13 180.0 179.9
CAU CAT NAS H9 119.8 120.0
CAU CAT NAS H10 240.2 240.0
CAT NAS CAR CBA 46.9 63.2
CAR NAS CAT CBB 244.8 235.6
CAT NAS CAR H8 177.4 180.3
H9 CAT NAS H10 120.4 120.0
CBB NAS CAR CBA 299.0 298.8
CAR NAS CBB CAT 117.7 124.7
CBB NAS CAR H8 69.5 55.9
CBB NAS CAT H9 60.2 65.2
CBB NAS CAT H10 299.9 305.1
NAS CBB CBC CBE 131.1 185.0
CBC CBB NAS H21 238.7 240.0
CBC CBB NAS H22 121.3 120.0
NAS CBB CBC H23 269.3 330.6
H21 CBB NAS H22 242.6 240.0
NAS CBB CBC H21 121.3 120.0
NAS CBB CBC H22 238.7 240.0
CBD CBC CBB CBE 290.5 291.4
CBD CBC CBB H23 152.4 145.7
CBB CBC CBE CBD 243.4 252.5
CBE CBC CBB H23 221.9 214.3
CBB CBC CBE H26 133.8 0.0
CBB CBC CBE H27 353.1 145.0
H21 CBB CBC H22 117.4 120.0
CBB CBC CBD CBE 101.9 107.5
CBD CBC CBB H21 300.4 356.3
CBD CBC CBB H22 183.0 236.4
CBB CBC CBD H23 207.7 215.0
CBC CBE CBD CBC -0.0 -0.0
CBE CBC CBD H23 105.8 107.5
CBD CBC CBE H26 250.4 107.5
CBD CBC CBE H27 109.6 252.5
CBE CBD CBC CBE 360.0 360.0
CBE CBD CBC H23 254.2 252.5
CBD CBE CBC H23 105.5 107.5
CBC CBE CBD H26 250.4 107.4
CBC CBE CBD H27 109.6 252.6
H24 CBD CBE H25 141.1 145.0
H26 CBE CBD H27 219.2 145.1
CBE CBC CBB H21 9.8 65.0
CBE CBC CBB H22 252.5 305.0
CBB CBC CBE H23 137.9 145.0
CBD CBC CBE H23 254.5 252.5
CBC CBE CBD H24 250.5 252.5
CBC CBE CBD H25 109.5 107.5
CBD CBE CBC H26 109.6 252.5
CBD CBE CBC H27 250.4 107.5
H26 CBE CBC H27 140.8 215.0
CAF CAE H1 OAD 232.2 238.8
CAF CAE H1 CAV 126.2 124.8
CAV CAE H1 OAD 106.1 114.0
H1 CAE CAV CAP 72.4 99.1
H1 CAE CAV CAW 204.9 213.0
H1 CAE CAV CAU 314.1 330.0
H3 CAJ CAI H2 360.0 360.0
H4 CAK CAL CAM 180.1 180.0
H4 CAK CAL H5 0.1 0.1
H4 CAK CAJ H3 360.0 360.0
CAK CAL H5 CAM 180.0 179.9
H5 CAL CAK H4 0.1 0.1
H5 CAL CAM NAN 359.9 359.9
CAG CAO H6 CAP 236.7 240.8
CAG CAO H6 H7 118.3 120.4
H6 CAO CAP CAV 180.6 188.8
H6 CAO CAP CAR 61.3 72.0
CAP CAO H6 H7 241.7 239.6
CAG CAO H7 CAP 123.3 119.2
CAG CAO H7 H6 241.7 239.6
H7 CAO CAP CAV 61.7 68.4
H7 CAO CAP CAR 302.4 311.6
CAP CAO H7 H6 118.3 120.4
H8 CAR CAP CAV 181.1 176.5
CAP CAR H8 CBA 109.6 123.4
CAP CAR H8 NAS 241.0 242.2
NAS CAR H8 CBA 228.7 241.3
H8 CAR CBA CAX 167.6 151.0
H8 CAR CBA H19 289.1 272.0
H8 CAR CBA H20 46.2 29.9
H8 CAR NAS CAT 177.4 180.3
H8 CAR NAS CBB 69.5 55.9
CAU CAT H9 H10 120.6 120.0
NAS CAT H9 H10 239.4 239.9
CAU CAT H10 H9 239.4 240.0
NAS CAT H10 H9 120.5 120.1
CAV CAU H11 H12 121.5 239.8
H11 CAU CAT H9 301.0 182.7
H11 CAU CAT H10 61.3 302.7
CAV CAU H12 H11 238.5 120.2
H12 CAU CAT H9 179.9 302.9
H12 CAU CAT H10 300.3 62.9
H13 CAY CAX CBA 355.3 356.6
CAB CAZ H14 CAY 180.0 180.0
H14 CAZ CAY H13 0.1 359.1
CAR CBA H19 CAX 230.7 235.9
H19 CBA CAR H8 289.1 272.0
CAR CBA H19 H20 115.4 118.0
CAX CBA H19 H20 244.6 242.1
CAR CBA H20 CAX 129.3 124.1
H20 CBA CAR H8 46.2 29.9
CAR CBA H20 H19 244.6 242.0
CAX CBA H20 H19 115.3 117.9
NAS CBB H21 CBC 231.7 240.0
NAS CBB H21 H22 115.8 120.0
H21 CBB CBC CBE 9.8 65.0
CBC CBB H21 H22 244.1 240.0
H21 CBB CBC H23 148.0 210.6
NAS CBB H22 CBC 128.3 120.0
NAS CBB H22 H21 244.2 240.0
H22 CBB CBC CBE 252.5 305.0
CBC CBB H22 H21 115.9 120.0
H22 CBB CBC H23 30.6 90.7
CBB CBC H23 CBE 221.7 214.3
H23 CBC CBB H21 148.0 210.6
H23 CBC CBB H22 30.6 90.7
CBD CBC H23 CBE 66.6 68.6
H23 CBC CBE CBD 105.5 107.5
H23 CBC CBE H26 356.0 215.0
H23 CBC CBE H27 215.2 0.0
H24 CBD CBC CBE 109.4 107.5
H24 CBD CBC H23 3.6 0.0
CBE CBD H24 H25 215.3 214.3
H24 CBD CBE H26 0.1 145.1
H24 CBD CBE H27 140.9 360.0
H25 CBD CBC CBE 250.6 252.5
H25 CBD CBC H23 144.8 145.0
CBE CBD H25 H24 144.7 145.7
H25 CBD CBE H26 219.1 0.1
H25 CBD CBE H27 359.9 215.0
CBC CBE H26 CBD 71.0 291.4
H26 CBE CBD H24 0.1 145.1
H26 CBE CBD H25 219.1 0.1
CBD CBE H26 H27 144.5 214.2
H26 CBE CBC H23 356.0 215.0
CBC CBE H26 H27 215.5 145.6
CBC CBE H27 CBD 288.9 68.6
H27 CBE CBD H24 140.9 360.0
H27 CBE CBD H25 359.9 215.0
CBD CBE H27 H26 215.5 145.8
H27 CBE CBC H23 215.2 0.0
CBC CBE H27 H26 144.5 214.4