PDB Chemical Component EHZ

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for EHZ

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O7 P1 1.517 1.609
O9 P1 1.516 1.480
P1 O6 1.615 1.610
O6 C20 1.453 1.429
C20 C17 1.526 1.529
O5 C16 1.417 1.428
C19 C17 1.531 1.530
C17 C16 1.534 1.530
C17 C18 1.531 1.530
C16 C15 1.519 1.507
C15 O4 1.228 1.212
C15 N2 1.326 1.347
N2 C14 1.457 1.465
C13 C14 1.512 1.530
C13 C12 1.514 1.507
N1 C12 1.337 1.348
N1 C11 1.455 1.465
C12 O3 1.228 1.213
C11 C10 1.512 1.530
O2 C9 1.207 1.213
C10 S1 1.812 1.810
C7 C6 1.522 1.530
C7 C8 1.524 1.530
C7 O1 1.425 1.429
C9 S1 1.760 1.712
C9 C8 1.503 1.506
C6 C5 1.506 1.530
C22 C21 1.510 1.530
C1 C21 1.508 1.530
C1 C2 1.509 1.529
C3 C2 1.510 1.530
C3 C4 1.509 1.530
C5 C4 1.510 1.531
O1 H1 0.950 0.967
C1 H2 1.099 1.090
C1 H3 1.100 1.090
C2 H4 1.100 1.090
C2 H5 1.100 1.090
C3 H6 1.100 1.090
C3 H7 1.101 1.090
C4 H8 1.100 1.090
C4 H9 1.100 1.090
C5 H10 1.100 1.090
C5 H11 1.100 1.089
C6 H12 1.100 1.090
C6 H13 1.100 1.090
C7 H14 1.100 1.090
C8 H15 1.100 1.090
C8 H16 1.100 1.091
C10 H17 1.100 1.090
C10 H18 1.100 1.090
C11 H19 1.100 1.090
C11 H20 1.100 1.089
C13 H21 1.100 1.091
C13 H22 1.100 1.089
C14 H23 1.099 1.091
C14 H24 1.100 1.089
C16 H25 1.100 1.090
C18 H26 1.100 1.090
C18 H27 1.100 1.090
C18 H28 1.100 1.090
C19 H29 1.100 1.090
C19 H30 1.100 1.090
C19 H31 1.100 1.090
C20 H32 1.100 1.090
C20 H33 1.100 1.090
C21 H34 1.100 1.090
C21 H35 1.100 1.090
C22 H36 1.100 1.090
C22 H37 1.100 1.090
N1 H39 1.000 0.970
N2 H40 1.000 0.970
O5 H41 0.950 0.967
O7 H42 0.950 0.967
P1 OP3 1.569 1.610
C22 C23   1.531
C23 C24   1.529
C24 C25   1.530
OP3 H44 0.950 0.967
C23 H45   1.090
C23 H46   1.089
C24 H47   1.091
C24 H48   1.090
C25 H49   1.090
C25 H50   1.090
C25 H51   1.091

Bond Angles for EHZ

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O7 P1 O9 112.6 109.5
P1 O7 H42 109.5 114.0
O7 P1 OP3 109.9 109.5
O9 P1 OP3 108.3 109.4
O6 C20 H32 109.4 109.4
O6 C20 H33 109.4 109.5
O5 C16 H25 108.7 109.5
C17 C16 H25 107.2 109.5
C17 C18 H26 109.5 109.5
C17 C18 H27 109.4 109.5
C17 C18 H28 109.5 109.5
C16 C15 O4 119.9 120.0
C16 C15 N2 117.0 120.0
N2 C15 O4 123.0 120.0
C15 N2 H40 118.4 120.0
N2 C14 H23 108.5 109.5
N2 C14 H24 108.6 109.5
C14 C13 H21 109.5 109.4
C14 C13 H22 109.5 109.5
C13 C14 H23 108.6 109.4
C13 C14 H24 108.6 109.5
C13 C12 O3 120.5 120.0
N1 C12 O3 121.5 120.0
N1 C11 H19 108.9 109.4
N1 C11 H20 108.9 109.5
C11 C10 S1 115.4 109.5
C11 C10 H17 108.0 109.5
C11 C10 H18 108.0 109.4
O2 C9 S1 123.2 120.0
O2 C9 C8 123.6 120.0
C10 S1 C9 101.8 100.0
S1 C10 H17 107.9 109.5
S1 C10 H18 108.0 109.5
C7 C6 H12 107.9 109.4
C7 C6 H13 107.9 109.5
C8 C7 H14 107.2 109.4
C7 C8 H15 108.8 109.5
C7 C8 H16 108.8 109.5
C7 O1 H1 109.5 114.0
C9 C8 H15 108.7 109.5
C9 C8 H16 108.8 109.5
C6 C5 H10 108.1 109.5
C6 C5 H11 108.1 109.5
C22 C21 H34 108.2 109.5
C22 C21 H35 108.2 109.4
C2 C1 C21 114.6 109.5
C21 C1 H2 108.1 109.4
C21 C1 H3 108.2 109.4
C1 C21 H34 108.3 109.5
C1 C21 H35 108.2 109.5
C2 C1 H2 108.2 109.5
C2 C1 H3 108.2 109.5
C1 C2 H4 108.2 109.5
C1 C2 H5 108.2 109.5
C3 C2 H4 108.1 109.4
C3 C2 H5 108.1 109.4
C4 C3 H6 108.4 109.5
C4 C3 H7 108.4 109.5
C3 C4 H8 108.0 109.4
C3 C4 H9 108.0 109.4
C5 C4 H8 108.0 109.5
C5 C4 H9 108.0 109.5
H2 C1 H3 109.5 109.5
H4 C2 H5 109.5 109.5
H6 C3 H7 109.5 109.4
H8 C4 H9 109.5 109.5
H10 C5 H11 109.5 109.5
H12 C6 H13 109.4 109.5
H15 C8 H16 109.5 109.4
H17 C10 H18 109.5 109.5
H19 C11 H20 109.5 109.5
H21 C13 H22 109.4 109.5
H23 C14 H24 109.5 109.5
H26 C18 H27 109.5 109.5
H26 C18 H28 109.4 109.4
H27 C18 H28 109.5 109.5
H29 C19 H30 109.5 109.4
H29 C19 H31 109.5 109.5
H30 C19 H31 109.5 109.5
H32 C20 H33 109.5 109.5
H34 C21 H35 109.5 109.4
H36 C22 H37 109.5 109.5
H36 C22 C23   109.5
H37 C22 C23   109.5
P1 OP3 H44 109.5 114.0
C22 C23 C24   109.4
C22 C23 H45   109.4
C22 C23 H46   109.5
C23 C24 C25   109.5
C24 C23 H45   109.5
C24 C23 H46   109.5
C23 C24 H47   109.5
C23 C24 H48   109.5
C25 C24 H47   109.4
C25 C24 H48   109.4
C24 C25 H49   109.5
C24 C25 H50   109.5
C24 C25 H51   109.5
H45 C23 H46   109.5
H47 C24 H48   109.4
H49 C25 H50   109.5
H49 C25 H51   109.4
H50 C25 H51   109.4

Torsion Angles for EHZ

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O9 P1 O7 OP3 120.9 120.0
O7 P1 OP3 H44 123.4 60.0
O9 P1 O7 H42 360.0 180.0
O7 P1 O9 OP3 238.2 240.0
O9 P1 OP3 H44 360.0 300.0
P1 O6 C20 H32 287.0 60.0
P1 O6 C20 H33 46.9 300.1
H32 C20 O6 H33 240.1 120.0
C20 C17 C16 H25 299.2 174.3
C20 C17 C18 H26 180.0 174.8
C20 C17 C18 H27 300.0 294.8
C20 C17 C18 H28 60.0 54.8
C17 C16 O5 H25 243.9 240.0
C19 C17 C16 H25 179.5 54.3
C19 C17 C18 H26 300.1 294.7
C19 C17 C18 H27 60.1 54.7
C19 C17 C18 H28 180.1 174.8
O5 C16 C17 H25 117.1 120.0
C17 C16 C15 O4 292.0 254.5
C17 C16 C15 N2 115.2 74.5
C18 C17 C16 H25 59.2 294.3
H26 C18 C17 H27 240.0 240.0
H26 C18 C17 H28 120.0 120.0
H27 C18 C17 H28 240.0 240.0
N2 C15 C16 O4 183.2 180.0
C16 C15 N2 H40 156.8 355.0
C16 C15 O4 N2 183.4 180.0
O4 C15 N2 H40 340.2 175.0
C16 C15 N2 O4 176.7 180.0
C15 N2 C14 H23 237.5 60.0
C15 N2 C14 H24 356.4 300.0
N2 C14 C13 H21 285.3 60.0
N2 C14 C13 H22 45.2 300.1
C13 C14 N2 H23 239.5 119.9
C13 C14 N2 H24 120.6 239.9
H23 C14 N2 H24 241.1 120.0
N2 C14 C13 H23 120.5 240.0
N2 C14 C13 H24 239.5 120.1
C14 C13 C12 O3 351.1 360.0
H21 C13 C14 H22 240.0 120.0
H23 C14 C13 H24 118.9 240.0
N1 C12 C13 O3 182.2 180.0
C13 C12 N1 O3 177.8 180.0
C12 N1 C11 H19 50.6 60.0
C12 N1 C11 H20 170.0 300.0
N1 C11 C10 S1 140.7 180.0
N1 C11 C10 H17 261.5 300.0
N1 C11 C10 H18 19.8 60.0
H19 C11 N1 H20 240.7 120.0
C11 C10 S1 C9 60.0 180.0
S1 C10 C11 H17 239.2 240.0
S1 C10 C11 H18 120.9 120.0
H17 C10 C11 H18 241.7 240.0
C10 S1 C9 O2 8.1 0.0
O2 C9 C8 H15 237.2 239.9
O2 C9 C8 H16 118.1 120.0
C11 C10 S1 H17 120.9 120.0
C11 C10 S1 H18 239.1 240.0
O2 C9 S1 C10 8.1 0.0
H17 C10 S1 H18 118.3 120.1
C6 C7 O1 H1 179.1 300.0
C7 C6 C5 H10 326.1 60.1
C7 C6 C5 H11 84.5 300.0
H12 C6 C7 H13 241.9 120.0
O2 C9 C8 C7 357.7 360.0
C8 C7 C6 H12 54.0 55.0
C8 C7 C6 H13 172.1 295.0
C8 C7 O1 H1 306.1 60.0
C9 C8 C7 H15 239.6 240.0
C9 C8 C7 H16 120.4 120.1
H15 C8 C7 H16 240.8 240.1
O2 C9 S1 C8 178.9 180.0
C9 S1 C10 H17 299.2 60.0
C9 S1 C10 H18 180.9 300.0
S1 C9 C8 H15 56.1 60.0
S1 C9 C8 H16 297.0 300.1
O2 C9 C8 S1 181.1 180.0
C9 C8 C7 H14 312.6 305.0
C7 C8 C9 H15 120.4 120.0
C7 C8 C9 H16 239.6 240.0
H15 C8 C9 H16 119.1 119.9
C6 C5 C4 H8 175.4 60.1
C6 C5 C4 H9 57.1 300.0
H10 C5 C6 H11 241.6 120.1
C22 C21 C1 H2 58.0 60.0
C22 C21 C1 H3 176.5 300.0
C1 C21 C22 H34 239.3 120.1
C1 C21 C22 H35 120.7 240.0
H34 C21 C22 H35 241.4 120.0
C22 C21 C1 H34 120.7 240.0
C22 C21 C1 H35 239.3 120.0
C2 C1 C21 H2 239.2 120.0
C2 C1 C21 H3 120.8 239.9
C21 C1 C2 H4 301.4 300.0
C21 C1 C2 H5 59.9 60.1
H2 C1 C21 H3 241.5 120.0
H34 C21 C1 H35 118.6 240.0
C21 C1 C2 H2 120.7 240.1
C21 C1 C2 H3 239.3 120.0
C2 C1 C21 H34 176.6 300.0
C2 C1 C21 H35 57.9 60.0
C3 C2 C1 H4 239.2 240.0
C3 C2 C1 H5 120.8 119.9
H2 C1 C2 H3 118.5 239.9
H4 C2 C1 H5 241.5 239.9
C3 C2 C1 C21 180.6 180.0
C3 C2 C1 H2 59.9 299.9
C3 C2 C1 H3 301.4 60.0
C1 C2 C3 H4 120.8 120.1
C1 C2 C3 H5 239.2 240.0
H4 C2 C3 H5 118.5 120.0
C4 C3 C2 H4 54.4 60.0
C4 C3 C2 H5 296.0 300.0
C5 C4 C3 H8 239.1 240.0
C5 C4 C3 H9 120.9 120.0
H6 C3 C4 H7 118.7 119.9
H8 C4 C3 H9 241.7 240.0
C5 C4 C3 H6 58.6 60.0
C5 C4 C3 H7 299.8 300.1
C3 C4 C5 H8 120.9 119.9
C3 C4 C5 H9 239.2 240.0
H8 C4 C5 H9 118.3 120.1
C2 C1 H2 C21 124.7 240.0
C21 C1 H2 H3 117.6 240.1
H2 C1 C21 H34 297.3 180.0
H2 C1 C21 H35 178.7 300.0
C2 C1 H2 H3 242.3 120.1
H2 C1 C2 H4 180.7 59.9
H2 C1 C2 H5 299.1 180.0
C2 C1 H3 C21 235.3 120.0
C21 C1 H3 H2 242.4 119.9
H3 C1 C21 H34 55.8 60.1
H3 C1 C21 H35 297.2 180.1
C2 C1 H3 H2 117.7 239.9
H3 C1 C2 H4 62.1 180.0
H3 C1 C2 H5 180.6 300.1
H4 C2 C1 C21 301.4 300.0
H4 C2 C1 H2 180.7 59.9
H4 C2 C1 H3 62.1 180.0
C1 C2 H4 H5 117.7 120.1
C3 C2 H4 H5 242.4 240.1
H5 C2 C1 C21 59.9 60.1
H5 C2 C1 H2 299.1 180.0
H5 C2 C1 H3 180.6 300.1
C1 C2 H5 H4 242.3 239.9
C3 C2 H5 H4 117.6 119.9
H6 C3 C2 H4 175.1 180.0
H6 C3 C2 H5 56.6 60.0
C4 C3 H6 H7 241.9 240.0
H6 C3 C4 H8 179.4 179.9
H6 C3 C4 H9 297.7 300.0
H7 C3 C2 H4 293.8 299.9
H7 C3 C2 H5 175.3 180.0
C4 C3 H7 H6 118.0 120.0
H7 C3 C4 H8 60.7 60.0
H7 C3 C4 H9 179.0 180.0
H8 C4 C3 H6 179.4 179.9
H8 C4 C3 H7 60.7 60.0
C3 C4 H8 H9 117.3 120.0
C5 C4 H8 H9 242.6 239.9
H9 C4 C3 H6 297.7 300.0
H9 C4 C3 H7 179.0 180.0
C3 C4 H9 H8 242.6 240.1
C5 C4 H9 H8 117.4 120.1
C6 C5 H10 H11 117.5 239.9
H10 C5 C4 H8 54.7 180.0
H10 C5 C4 H9 296.4 59.9
C6 C5 H11 H10 242.4 120.0
H11 C5 C4 H8 296.2 300.1
H11 C5 C4 H9 177.9 180.0
C7 C6 H12 H13 117.2 240.0
H12 C6 C5 H10 205.2 180.0
H12 C6 C5 H11 323.6 59.9
C7 C6 H13 H12 242.8 119.9
H13 C6 C5 H10 87.0 300.1
H13 C6 C5 H11 205.5 180.0
H14 C7 C6 H12 294.8 295.0
H14 C7 C6 H13 52.9 175.0
H14 C7 C8 H15 73.1 65.1
H14 C7 C8 H16 192.2 185.0
H14 C7 O1 H1 62.2 179.9
H15 C8 C7 H14 73.1 65.1
C7 C8 H15 H16 118.7 120.0
C9 C8 H15 H16 241.3 240.0
H16 C8 C7 H14 192.2 185.0
C7 C8 H16 H15 241.3 240.0
C9 C8 H16 H15 118.7 120.0
C11 C10 H17 S1 234.6 240.0
C11 C10 H17 H18 117.3 120.0
H17 C10 S1 C9 299.2 60.0
S1 C10 H17 H18 242.7 240.0
C11 C10 H18 S1 125.4 120.0
C11 C10 H18 H17 242.7 240.0
H18 C10 S1 C9 180.9 300.0
S1 C10 H18 H17 117.3 120.0
N1 C11 H19 H20 119.0 240.0
H19 C11 C10 S1 20.4 299.9
H19 C11 C10 H17 141.2 59.9
H19 C11 C10 H18 259.5 179.9
N1 C11 H20 H19 241.0 120.0
H20 C11 C10 S1 261.0 60.0
H20 C11 C10 H17 21.8 179.9
H20 C11 C10 H18 140.1 300.0
C14 C13 H21 H22 120.0 240.0
H21 C13 C14 H23 164.7 180.0
H21 C13 C14 H24 45.8 300.0
H21 C13 C12 O3 231.1 120.0
C14 C13 H22 H21 240.0 120.0
H22 C13 C14 H23 284.7 60.0
H22 C13 C14 H24 165.8 180.0
H22 C13 C12 O3 111.1 239.9
N2 C14 H23 H24 118.3 240.0
H23 C14 C13 H21 164.7 180.0
H23 C14 C13 H22 284.7 60.0
C13 C14 H23 H24 241.6 120.0
N2 C14 H24 H23 241.7 120.0
H24 C14 C13 H21 45.8 300.0
H24 C14 C13 H22 165.8 180.0
C13 C14 H24 H23 118.4 240.1
H25 C16 C15 O4 172.4 134.5
H25 C16 C15 N2 355.7 314.5
C17 C18 H26 H27 120.0 120.0
C17 C18 H26 H28 240.0 240.0
H27 C18 H26 H28 120.0 120.0
C17 C18 H27 H26 240.0 240.0
C17 C18 H27 H28 120.0 120.0
H26 C18 H27 H28 240.0 240.0
C17 C18 H28 H26 120.0 120.0
C17 C18 H28 H27 240.0 240.0
H26 C18 H28 H27 120.0 120.0
H30 C19 H29 H31 120.0 120.0
H29 C19 H30 H31 240.0 240.0
H29 C19 H31 H30 120.0 120.0
O6 C20 H32 H33 119.8 240.0
O6 C20 H33 H32 240.2 119.9
C22 C21 H34 H35 117.8 240.1
H34 C21 C1 H2 297.3 180.0
H34 C21 C1 H3 55.8 60.1
C1 C21 H34 H35 242.2 120.0
C22 C21 H35 H34 242.2 120.0
H35 C21 C1 H2 178.7 300.0
H35 C21 C1 H3 297.2 180.1
C1 C21 H35 H34 117.8 240.0
H36 C22 C21 H34 247.2 180.0
H36 C22 C21 H35 5.9 60.0
H37 C22 H36 C23   120.1
H36 C22 C23 C24   60.1
H36 C22 C23 H45   180.0
H36 C22 C23 H46   300.0
H37 C22 C21 H34 358.9 300.0
H37 C22 C21 H35 117.6 180.0
H36 C22 H37 C23   239.9
H37 C22 C23 C24   300.0
H37 C22 C23 H45   59.9
H37 C22 C23 H46   179.9
H39 N1 C12 O3 168.2 180.1
H39 N1 C11 H19 230.6 240.0
H39 N1 C11 H20 350.0 120.0
H40 N2 C15 O4 340.2 175.0
H40 N2 C14 H23 57.5 240.1
H40 N2 C14 H24 176.4 120.1
H41 O5 C16 H25 221.7 179.9
H42 O7 P1 O9 360.0 180.0
H42 O7 P1 OP3 239.1 60.0
O7 P1 OP3 O9 123.4 120.0
OP3 P1 O7 H42 239.1 60.0
C23 C22 C21 H34   60.0
C23 C22 C21 H35   300.0
H36 C22 C23 H37   120.1
C22 C23 C24 C25   180.0
C24 C23 C22 H45   240.0
C24 C23 C22 H46   120.0
C22 C23 C24 H47   300.0
C22 C23 C24 H48   60.0
H45 C23 C22 H46   240.0
C22 C23 C24 H45   119.9
C22 C23 C24 H46   240.0
C25 C24 C23 H47   240.0
C25 C24 C23 H48   120.0
C23 C24 C25 H49   300.0
C23 C24 C25 H50   60.0
C23 C24 C25 H51   180.0
H45 C23 C24 H46   120.1
H47 C24 C23 H48   240.0
C25 C24 C23 H45   60.1
C25 C24 C23 H46   300.0
C23 C24 C25 H47   120.0
C23 C24 C25 H48   239.9
H47 C24 C25 H48   119.9
H49 C25 C24 H50   240.0
H49 C25 C24 H51   120.0
H50 C25 C24 H51   240.0
C22 C23 H45 C24   240.1
C22 C23 H45 H46   120.0
H45 C23 C24 C25   60.1
C24 C23 H45 H46   239.9
H45 C23 C24 H47   180.0
H45 C23 C24 H48   300.1
C22 C23 H46 C24   120.0
C22 C23 H46 H45   240.0
H46 C23 C24 C25   300.0
C24 C23 H46 H45   120.1
H46 C23 C24 H47   60.0
H46 C23 C24 H48   180.0
C23 C24 H47 C25   240.0
H47 C24 C23 H45   180.0
H47 C24 C23 H46   60.0
C23 C24 H47 H48   120.1
C25 C24 H47 H48   240.1
H47 C24 C25 H49   179.9
H47 C24 C25 H50   300.0
H47 C24 C25 H51   59.9
C23 C24 H48 C25   120.0
H48 C24 C23 H45   300.1
H48 C24 C23 H46   180.0
C23 C24 H48 H47   239.9
C25 C24 H48 H47   119.9
H48 C24 C25 H49   60.0
H48 C24 C25 H50   180.1
H48 C24 C25 H51   300.0
H49 C25 C24 H47   179.9
H49 C25 C24 H48   60.0
C24 C25 H49 H50   120.0
C24 C25 H49 H51   240.0
H50 C25 H49 H51   119.9
H50 C25 C24 H47   300.0
H50 C25 C24 H48   180.1
C24 C25 H50 H49   240.0
C24 C25 H50 H51   120.0
H49 C25 H50 H51   240.0
H51 C25 C24 H47   59.9
H51 C25 C24 H48   300.0
C24 C25 H51 H49   120.0
C24 C25 H51 H50   240.0
H49 C25 H51 H50   120.0