PDB Chemical Component EHF
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for EHF
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C6 |
1.404 |
1.363 |
C1 |
C2 |
1.401 |
1.393 |
C6 |
C5 |
1.409 |
1.402 |
C2 |
C3 |
1.388 |
1.361 |
C5 |
C10 |
1.464 |
1.410 |
C5 |
C4 |
1.390 |
1.418 |
C3 |
C4 |
1.433 |
1.408 |
C10 |
C9 |
1.431 |
1.359 |
C4 |
N7 |
1.348 |
1.334 |
C9 |
C8 |
1.408 |
1.405 |
C9 |
C13 |
1.437 |
1.508 |
N7 |
C8 |
1.347 |
1.323 |
C8 |
C11 |
1.434 |
1.483 |
C13 |
N12 |
1.364 |
1.469 |
C11 |
N12 |
1.304 |
1.366 |
C11 |
C14 |
1.413 |
1.379 |
N12 |
C17 |
1.347 |
1.348 |
C14 |
C15 |
1.376 |
1.398 |
C26 |
C25 |
1.518 |
1.530 |
C17 |
O18 |
1.394 |
1.220 |
C17 |
C16 |
1.398 |
1.405 |
C15 |
C16 |
1.426 |
1.365 |
C15 |
C20 |
1.546 |
1.507 |
C16 |
C19 |
1.531 |
1.507 |
C25 |
C20 |
1.512 |
1.530 |
O24 |
C20 |
1.411 |
1.428 |
C20 |
C21 |
1.522 |
1.508 |
C19 |
O27 |
1.443 |
1.429 |
C21 |
O23 |
1.249 |
1.208 |
C21 |
O22 |
1.274 |
1.342 |
C1 |
H1 |
1.080 |
1.080 |
C2 |
H2 |
1.080 |
1.080 |
C3 |
H3 |
1.080 |
1.080 |
C6 |
H4 |
1.080 |
1.080 |
C10 |
H5 |
1.080 |
1.081 |
C13 |
H6 |
1.100 |
1.090 |
C14 |
H7 |
1.080 |
1.080 |
C19 |
H9 |
1.100 |
1.090 |
C19 |
H10 |
1.100 |
1.090 |
O22 |
H11 |
0.950 |
0.967 |
O24 |
H12 |
0.950 |
0.967 |
C25 |
H13 |
1.100 |
1.090 |
C25 |
H14 |
1.100 |
1.090 |
C26 |
H15 |
1.100 |
1.090 |
C26 |
H16 |
1.100 |
1.091 |
C26 |
H17 |
1.100 |
1.090 |
O27 |
H18 |
0.950 |
0.967 |
C13 |
H8 |
1.100 |
1.089 |
Bond Angles for EHF
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C6 |
122.3 |
120.9 |
C1 |
C6 |
C5 |
119.9 |
119.6 |
C6 |
C1 |
H1 |
118.8 |
119.6 |
C1 |
C6 |
H4 |
120.1 |
120.2 |
C1 |
C2 |
C3 |
118.0 |
121.1 |
C2 |
C1 |
H1 |
118.8 |
119.6 |
C1 |
C2 |
H2 |
121.0 |
119.4 |
C6 |
C5 |
C10 |
121.2 |
121.3 |
C2 |
C3 |
C4 |
120.1 |
119.8 |
C3 |
C2 |
H2 |
121.0 |
119.5 |
C2 |
C3 |
H3 |
120.0 |
120.1 |
C5 |
C10 |
C9 |
117.2 |
118.1 |
C5 |
C10 |
H5 |
121.4 |
120.9 |
C5 |
C4 |
N7 |
120.1 |
120.1 |
C3 |
C4 |
N7 |
118.3 |
120.9 |
C4 |
C3 |
H3 |
120.0 |
120.1 |
C10 |
C9 |
C13 |
137.4 |
132.7 |
C4 |
N7 |
C8 |
121.0 |
121.4 |
C9 |
C8 |
C11 |
105.9 |
108.2 |
C9 |
C13 |
N12 |
108.4 |
106.5 |
C9 |
C13 |
H6 |
109.7 |
110.0 |
C9 |
C13 |
H8 |
109.7 |
110.0 |
N7 |
C8 |
C11 |
130.1 |
131.0 |
C8 |
C11 |
N12 |
110.1 |
109.8 |
C8 |
C11 |
C14 |
125.9 |
130.2 |
C13 |
N12 |
C17 |
130.7 |
130.6 |
N12 |
C11 |
C14 |
124.0 |
120.0 |
C11 |
N12 |
C17 |
119.3 |
120.7 |
C11 |
C14 |
C15 |
119.5 |
120.0 |
C11 |
C14 |
H7 |
120.3 |
120.0 |
N12 |
C17 |
O18 |
119.4 |
119.8 |
N12 |
C17 |
C16 |
120.0 |
120.4 |
C14 |
C15 |
C16 |
115.4 |
119.4 |
C14 |
C15 |
C20 |
119.6 |
120.3 |
C15 |
C14 |
H7 |
120.2 |
120.0 |
C26 |
C25 |
H13 |
108.3 |
109.5 |
C26 |
C25 |
H14 |
108.4 |
109.5 |
C17 |
C16 |
C19 |
118.8 |
120.3 |
C16 |
C15 |
C20 |
125.0 |
120.3 |
C15 |
C16 |
C19 |
119.4 |
120.2 |
C15 |
C20 |
C21 |
109.0 |
109.5 |
C16 |
C19 |
O27 |
104.3 |
109.5 |
C16 |
C19 |
H9 |
110.8 |
109.5 |
C16 |
C19 |
H10 |
110.8 |
109.5 |
C20 |
C21 |
O23 |
119.1 |
120.0 |
C20 |
C21 |
O22 |
120.7 |
120.0 |
O27 |
C19 |
H9 |
110.8 |
109.4 |
O27 |
C19 |
H10 |
110.7 |
109.5 |
C19 |
O27 |
H18 |
109.5 |
114.0 |
O22 |
C21 |
O23 |
120.3 |
120.0 |
C21 |
O22 |
H11 |
109.5 |
117.0 |
H6 |
C13 |
H8 |
109.5 |
110.1 |
H9 |
C19 |
H10 |
109.5 |
109.5 |
H13 |
C25 |
H14 |
109.5 |
109.4 |
H15 |
C26 |
H16 |
109.5 |
109.5 |
H15 |
C26 |
H17 |
109.4 |
109.5 |
H16 |
C26 |
H17 |
109.5 |
109.5 |
Torsion Angles for EHF
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C1 |
C2 |
C3 |
1.7 |
0.1 |
C2 |
C1 |
C6 |
H1 |
180.0 |
179.8 |
C6 |
C1 |
C2 |
H2 |
181.7 |
180.0 |
C1 |
C6 |
C5 |
C10 |
180.1 |
180.0 |
C2 |
C1 |
C6 |
C5 |
358.0 |
0.0 |
C6 |
C1 |
C2 |
H1 |
180.0 |
180.3 |
C2 |
C1 |
C6 |
H4 |
178.0 |
180.0 |
C1 |
C2 |
C3 |
C4 |
359.1 |
359.9 |
C3 |
C2 |
C1 |
H2 |
180.0 |
180.1 |
C1 |
C2 |
C3 |
H3 |
179.1 |
180.0 |
C5 |
C6 |
C1 |
H1 |
178.0 |
180.3 |
C1 |
C6 |
C5 |
H4 |
180.0 |
180.0 |
C6 |
C5 |
C10 |
C9 |
180.3 |
179.9 |
C6 |
C5 |
C10 |
H5 |
0.3 |
359.9 |
C6 |
C5 |
C4 |
N7 |
179.7 |
180.1 |
C3 |
C2 |
C1 |
C6 |
1.7 |
0.1 |
C3 |
C2 |
C1 |
H1 |
181.7 |
179.8 |
C1 |
C2 |
C3 |
H2 |
180.0 |
179.9 |
C2 |
C3 |
C4 |
N7 |
180.0 |
180.0 |
C4 |
C3 |
C2 |
H3 |
180.0 |
179.9 |
C10 |
C5 |
C4 |
N7 |
1.0 |
0.1 |
C5 |
C10 |
C9 |
C13 |
180.9 |
180.0 |
C1 |
C6 |
C5 |
C4 |
1.4 |
360.0 |
C3 |
C4 |
C5 |
N7 |
179.7 |
179.9 |
C5 |
C4 |
C3 |
H3 |
180.4 |
180.0 |
C5 |
C4 |
N7 |
C8 |
359.5 |
360.0 |
C4 |
C3 |
C2 |
H2 |
179.1 |
180.0 |
C2 |
C3 |
C4 |
H3 |
180.0 |
180.1 |
C5 |
C4 |
C3 |
N7 |
180.3 |
180.1 |
C3 |
C4 |
N7 |
C8 |
179.9 |
180.1 |
C5 |
C10 |
C9 |
H5 |
180.0 |
180.0 |
C10 |
C9 |
C8 |
C11 |
180.3 |
180.0 |
C10 |
C9 |
C13 |
N12 |
179.8 |
180.0 |
C10 |
C9 |
C13 |
H6 |
299.6 |
299.3 |
C10 |
C9 |
C13 |
H8 |
59.9 |
60.7 |
N7 |
C4 |
C3 |
H3 |
0.0 |
359.9 |
C4 |
N7 |
C8 |
C11 |
179.5 |
180.0 |
C5 |
C10 |
C9 |
C8 |
0.6 |
0.1 |
N7 |
C8 |
C9 |
C11 |
179.6 |
180.0 |
C9 |
C8 |
C11 |
N12 |
359.8 |
359.9 |
C9 |
C8 |
C11 |
C14 |
179.3 |
180.0 |
C13 |
C9 |
C8 |
C11 |
0.1 |
0.0 |
C9 |
C13 |
N12 |
C17 |
179.5 |
180.0 |
H6 |
C13 |
C9 |
H8 |
239.7 |
238.6 |
C9 |
C8 |
N7 |
C11 |
180.5 |
180.0 |
N7 |
C8 |
C11 |
N12 |
180.3 |
180.0 |
N7 |
C8 |
C11 |
C14 |
359.8 |
360.0 |
N12 |
C11 |
C8 |
C14 |
180.5 |
180.0 |
C8 |
C11 |
N12 |
C17 |
180.5 |
180.0 |
C8 |
C11 |
C14 |
C15 |
180.0 |
180.0 |
C8 |
C11 |
C14 |
H7 |
359.9 |
360.0 |
C9 |
C13 |
N12 |
H6 |
119.8 |
119.2 |
C9 |
C13 |
N12 |
H8 |
240.2 |
240.7 |
C13 |
N12 |
C11 |
C14 |
180.7 |
180.0 |
C11 |
N12 |
C13 |
C17 |
180.3 |
180.0 |
C13 |
N12 |
C17 |
O18 |
0.0 |
360.0 |
C13 |
N12 |
C17 |
C16 |
179.4 |
179.9 |
C9 |
C13 |
N12 |
C11 |
359.9 |
360.0 |
C8 |
C11 |
N12 |
C14 |
179.5 |
180.0 |
C13 |
N12 |
C11 |
C17 |
179.7 |
180.0 |
N12 |
C11 |
C14 |
C15 |
359.4 |
0.0 |
N12 |
C11 |
C14 |
H7 |
179.4 |
180.0 |
C11 |
N12 |
C17 |
O18 |
179.7 |
180.0 |
C11 |
N12 |
C17 |
C16 |
359.0 |
359.9 |
C8 |
C11 |
C14 |
N12 |
180.6 |
180.0 |
C14 |
C11 |
N12 |
C17 |
1.0 |
360.0 |
C11 |
C14 |
C15 |
C16 |
0.3 |
0.1 |
C11 |
C14 |
C15 |
C20 |
179.5 |
180.0 |
C15 |
C14 |
C11 |
H7 |
180.0 |
180.0 |
C17 |
N12 |
C11 |
C14 |
1.0 |
360.0 |
N12 |
C17 |
C16 |
C19 |
179.8 |
180.0 |
C11 |
C14 |
C15 |
H7 |
180.0 |
180.0 |
C16 |
C15 |
C14 |
C20 |
180.7 |
180.1 |
C14 |
C15 |
C16 |
C19 |
180.6 |
180.0 |
C14 |
C15 |
C20 |
C21 |
108.7 |
248.1 |
H13 |
C25 |
C26 |
H14 |
241.3 |
120.0 |
N12 |
C17 |
O18 |
C16 |
179.3 |
179.9 |
O18 |
C17 |
C16 |
C19 |
359.1 |
360.0 |
N12 |
C17 |
C16 |
O18 |
180.7 |
180.1 |
C17 |
C16 |
C15 |
C20 |
180.4 |
180.0 |
C15 |
C16 |
C17 |
C19 |
181.0 |
180.1 |
C17 |
C16 |
C19 |
O27 |
282.1 |
155.4 |
C17 |
C16 |
C19 |
H9 |
41.2 |
275.4 |
C17 |
C16 |
C19 |
H10 |
162.9 |
35.4 |
N12 |
C17 |
C16 |
C15 |
0.7 |
0.1 |
C14 |
C15 |
C16 |
C20 |
179.2 |
179.9 |
C16 |
C15 |
C14 |
H7 |
180.3 |
180.1 |
C17 |
C16 |
C15 |
C19 |
179.0 |
179.9 |
C16 |
C15 |
C20 |
C21 |
287.9 |
68.0 |
C15 |
C16 |
C19 |
O27 |
101.1 |
335.3 |
C15 |
C16 |
C19 |
H9 |
220.3 |
95.3 |
C15 |
C16 |
C19 |
H10 |
342.0 |
215.3 |
C14 |
C15 |
C20 |
C16 |
180.8 |
180.1 |
C20 |
C15 |
C14 |
H7 |
359.6 |
360.0 |
C20 |
C15 |
C16 |
C19 |
1.4 |
0.1 |
C15 |
C20 |
C21 |
O23 |
312.3 |
193.5 |
C15 |
C20 |
C21 |
O22 |
132.2 |
13.6 |
C19 |
C16 |
C15 |
C20 |
1.4 |
0.1 |
O27 |
C19 |
C16 |
H9 |
240.8 |
240.0 |
O27 |
C19 |
C16 |
H10 |
119.1 |
120.0 |
C16 |
C19 |
O27 |
H18 |
180.0 |
172.0 |
H9 |
C19 |
C16 |
H10 |
238.3 |
240.0 |
O22 |
C21 |
C20 |
O23 |
179.9 |
180.1 |
C20 |
C21 |
O22 |
H11 |
180.1 |
180.0 |
C16 |
C19 |
O27 |
H9 |
119.2 |
120.0 |
C16 |
C19 |
O27 |
H10 |
240.8 |
240.0 |
H9 |
C19 |
O27 |
H10 |
121.6 |
120.0 |
C20 |
C21 |
O23 |
O22 |
179.9 |
180.1 |
O23 |
C21 |
O22 |
H11 |
0.0 |
0.1 |
C20 |
C21 |
O22 |
O23 |
180.1 |
179.9 |
C2 |
C1 |
H1 |
C6 |
180.0 |
180.2 |
H1 |
C1 |
C6 |
C5 |
178.0 |
180.3 |
H1 |
C1 |
C6 |
H4 |
358.0 |
0.2 |
H1 |
C1 |
C2 |
C3 |
181.7 |
179.8 |
H1 |
C1 |
C2 |
H2 |
1.7 |
359.7 |
H2 |
C2 |
C1 |
C6 |
181.7 |
180.0 |
C1 |
C2 |
H2 |
C3 |
180.0 |
180.1 |
H2 |
C2 |
C1 |
H1 |
1.7 |
359.7 |
H2 |
C2 |
C3 |
C4 |
179.1 |
180.0 |
H2 |
C2 |
C3 |
H3 |
359.1 |
0.1 |
C2 |
C3 |
H3 |
C4 |
180.0 |
179.9 |
H3 |
C3 |
C2 |
H2 |
359.1 |
0.1 |
H3 |
C3 |
C4 |
N7 |
0.0 |
359.9 |
C1 |
C6 |
H4 |
C5 |
180.0 |
180.0 |
H4 |
C6 |
C1 |
H1 |
358.0 |
0.2 |
H4 |
C6 |
C5 |
C10 |
0.1 |
0.0 |
C5 |
C10 |
H5 |
C9 |
180.0 |
180.0 |
H5 |
C10 |
C9 |
C13 |
0.8 |
0.0 |
C9 |
C13 |
H6 |
N12 |
241.0 |
242.9 |
C9 |
C13 |
H6 |
H8 |
120.5 |
121.4 |
H6 |
C13 |
N12 |
C17 |
59.7 |
60.8 |
C11 |
C14 |
H7 |
C15 |
180.0 |
180.0 |
H7 |
C14 |
C15 |
C16 |
180.3 |
180.1 |
H7 |
C14 |
C15 |
C20 |
359.6 |
360.0 |
C16 |
C19 |
H9 |
O27 |
244.8 |
240.0 |
C16 |
C19 |
H9 |
H10 |
122.4 |
120.0 |
O27 |
C19 |
H9 |
H10 |
237.6 |
240.0 |
H9 |
C19 |
O27 |
H18 |
60.8 |
52.0 |
C16 |
C19 |
H10 |
O27 |
115.2 |
120.0 |
C16 |
C19 |
H10 |
H9 |
237.6 |
240.0 |
O27 |
C19 |
H10 |
H9 |
122.4 |
119.9 |
H10 |
C19 |
O27 |
H18 |
299.2 |
292.0 |
H11 |
O22 |
C21 |
O23 |
0.0 |
0.1 |
C26 |
C25 |
H13 |
H14 |
118.0 |
240.0 |
C26 |
C25 |
H14 |
H13 |
242.0 |
120.1 |
H15 |
C26 |
C25 |
H13 |
300.6 |
300.0 |
H15 |
C26 |
C25 |
H14 |
59.3 |
180.0 |
H16 |
C26 |
H15 |
H17 |
120.0 |
120.0 |
H16 |
C26 |
C25 |
H13 |
60.6 |
60.0 |
H16 |
C26 |
C25 |
H14 |
179.3 |
300.0 |
H15 |
C26 |
H16 |
H17 |
240.0 |
240.0 |
H17 |
C26 |
C25 |
H13 |
180.6 |
180.0 |
H17 |
C26 |
C25 |
H14 |
299.3 |
60.0 |
H15 |
C26 |
H17 |
H16 |
120.0 |
120.0 |
H18 |
O27 |
C19 |
H9 |
60.8 |
52.0 |
H18 |
O27 |
C19 |
H10 |
299.2 |
292.0 |
C9 |
C13 |
H8 |
N12 |
119.0 |
117.1 |
C9 |
C13 |
H8 |
H6 |
239.5 |
238.6 |
H8 |
C13 |
N12 |
C17 |
299.3 |
299.3 |