PDB Chemical Component EG2

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for EG2

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
S	O1	1.359	1.421
S	O2	1.466	1.420
S	N1	1.481	1.656
S	C4	1.649	1.761
N1	HN11	1.021	0.971
N1	HN12	1.020	0.969
C1	C2	1.409	1.396
C1	C6	1.374	1.394
C1	C7	1.463	1.479
C2	C3	1.411	1.379
C2	H2	1.104	1.080
C3	C4	1.417	1.383
C3	H3	1.103	1.080
C4	C5	1.416	1.383
C5	C6	1.397	1.379
C5	H5	1.102	1.081
C6	H6	1.102	1.080
C7	O3	1.194	1.215
C7	N2	1.415	1.347
N2	C8	1.440	1.466
N2	HN2	1.021	0.970
C8	C9	1.468	1.529
C8	H81	1.116	1.090
C8	H82	1.115	1.090
C9	O4	1.446	1.429
C9	H91	1.115	1.090
C9	H92	1.115	1.090
O4	C10	1.421	1.429
C10	C11	1.498	1.529
C10	H101	1.115	1.090
C10	H102	1.114	1.090
C11	O5	1.455	1.429
C11	H111	1.115	1.090
C11	H112	1.116	1.090
O5	C12	1.407	1.429
C12	C13	1.443	1.529
C12	H121	1.115	1.090
C12	H122	1.115	1.089
C13	N3	1.452	1.469
C13	H131	1.115	1.090
C13	H132	1.114	1.089
N3	HN31	1.019	1.008
N3	HN32	1.020	1.008

Bond Angles for EG2

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O1	S	O2	116.2	125.3
O1	S	N1	106.9	105.7
O1	S	C4	115.1	105.7
O2	S	N1	114.5	105.8
O2	S	C4	101.3	105.8
N1	S	C4	102.1	107.4
S	N1	HN11	106.9	120.0
S	N1	HN12	113.2	120.0
S	C4	C3	119.8	119.8
S	C4	C5	123.0	119.9
HN11	N1	HN12	113.2	120.1
C2	C1	C6	124.0	119.7
C2	C1	C7	118.8	120.1
C1	C2	C3	115.9	119.9
C1	C2	H2	122.0	120.1
C6	C1	C7	117.2	120.2
C1	C6	C5	118.5	119.9
C1	C6	H6	119.9	120.1
C1	C7	O3	127.7	120.0
C1	C7	N2	116.9	119.9
C3	C2	H2	122.1	120.0
C2	C3	C4	122.7	120.2
C2	C3	H3	118.4	120.0
C4	C3	H3	118.9	119.9
C3	C4	C5	117.3	120.2
C4	C5	C6	121.5	120.2
C4	C5	H5	119.9	119.9
C6	C5	H5	118.5	119.9
C5	C6	H6	121.5	120.0
O3	C7	N2	115.4	120.0
C7	N2	C8	122.8	120.0
C7	N2	HN2	117.7	120.1
C8	N2	HN2	119.5	119.9
N2	C8	C9	119.3	109.5
N2	C8	H81	108.7	109.5
N2	C8	H82	108.7	109.4
C9	C8	H81	108.7	109.6
C9	C8	H82	108.7	109.5
C8	C9	O4	112.0	109.5
C8	C9	H91	111.2	109.4
C8	C9	H92	111.2	109.5
H81	C8	H82	101.3	109.4
O4	C9	H91	111.3	109.5
O4	C9	H92	111.3	109.5
C9	O4	C10	111.4	106.8
H91	C9	H92	99.1	109.5
O4	C10	C11	112.4	109.5
O4	C10	H101	111.1	109.5
O4	C10	H102	111.1	109.5
C11	C10	H101	111.1	109.5
C11	C10	H102	111.2	109.4
C10	C11	O5	108.4	109.5
C10	C11	H111	112.6	109.4
C10	C11	H112	112.6	109.5
H101	C10	H102	99.2	109.4
O5	C11	H111	112.6	109.5
O5	C11	H112	112.6	109.4
C11	O5	C12	107.1	106.8
H111	C11	H112	97.8	109.5
O5	C12	C13	110.5	109.5
O5	C12	H121	111.8	109.4
O5	C12	H122	111.8	109.5
C13	C12	H121	111.9	109.5
C13	C12	H122	111.9	109.5
C12	C13	N3	111.1	109.4
C12	C13	H131	111.6	109.5
C12	C13	H132	111.6	109.5
H121	C12	H122	98.5	109.4
N3	C13	H131	111.6	109.5
N3	C13	H132	111.6	109.5
C13	N3	HN31	111.1	106.7
C13	N3	HN32	111.6	106.7
H131	C13	H132	98.8	109.5
HN31	N3	HN32	111.6	106.7

Torsion Angles for EG2

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O2	S	O1	N1	129.2	123.1
O2	S	O1	C4	241.8	236.9
N1	S	O1	C4	112.6	113.7
O1	S	N1	HN11	180.0	67.4
O1	S	N1	HN12	54.7	247.4
O1	S	C4	C3	74.1	202.5
O1	S	C4	C5	252.8	22.6
O1	S	O2	N1	234.5	236.9
O1	S	O2	C4	125.5	123.1
N1	S	O2	C4	251.0	246.2
O2	S	N1	HN11	49.8	292.7
O2	S	N1	HN12	284.5	112.6
O2	S	C4	C3	200.4	337.3
O2	S	C4	C5	19.1	157.4
O1	S	N1	O2	130.2	134.8
O1	S	N1	C4	238.8	247.5
O2	S	N1	C4	108.5	112.7
N1	S	C4	C3	318.7	90.0
N1	S	C4	C5	137.4	270.1
HN11	N1	S	HN12	125.3	180.0
O1	S	C4	O2	233.7	225.2
O1	S	C4	N1	115.4	112.5
O2	S	C4	N1	241.7	247.3
C4	S	N1	HN11	301.3	180.0
C4	S	N1	HN12	175.9	359.9
C2	C3	C4	S	180.8	180.0
S	C4	C3	H3	0.8	360.0
C3	C4	S	C5	181.3	180.0
S	C4	C5	C6	179.8	179.7
S	C4	C5	H5	359.8	0.0
HN11	N1	S	C4	301.3	180.0
S	N1	HN11	HN12	234.7	180.0
HN12	N1	S	C4	175.9	359.9
S	N1	HN12	HN11	121.9	180.0
C6	C1	C2	C7	177.0	180.4
C2	C1	C6	C5	1.0	359.4
C2	C1	C6	H6	181.1	180.0
C2	C1	C7	O3	178.9	0.1
C2	C1	C7	N2	356.7	180.0
C3	C2	C1	H2	180.0	180.1
C1	C2	C3	C4	358.9	0.0
C1	C2	C3	H3	178.9	180.0
C2	C1	C6	C7	183.0	179.6
C6	C1	C2	C3	359.5	0.3
C6	C1	C2	H2	179.5	180.2
C6	C1	C7	O3	1.7	179.7
C6	C1	C7	N2	179.5	359.7
C4	C5	C6	C1	0.0	0.6
C1	C6	C5	H5	180.0	180.3
C5	C6	C1	H6	180.0	179.4
C2	C1	C7	C6	177.2	180.4
C7	C1	C2	C3	182.5	180.0
C7	C1	C2	H2	2.5	359.9
C7	C1	C6	C5	178.1	179.7
C7	C1	C6	H6	358.1	0.3
O3	C7	C1	N2	182.2	180.0
C1	C7	N2	C8	179.4	180.1
C1	C7	N2	HN2	359.4	0.0
S	C4	C3	C2	180.8	180.0
C3	C2	C1	C6	359.5	0.3
C3	C2	C1	C7	182.5	180.0
C1	C2	C3	H2	180.0	179.9
C4	C3	C2	H3	180.0	180.0
C2	C3	C4	C5	2.1	360.0
H2	C2	C1	C6	179.5	180.2
H2	C2	C1	C7	2.5	359.9
C1	C2	H2	C3	180.0	180.1
H2	C2	C3	C4	178.9	180.1
H2	C2	C3	H3	358.9	0.1
S	C4	C3	C5	178.8	180.0
C4	C3	C2	H2	178.9	180.1
C2	C3	C4	H3	180.0	180.0
C3	C4	C5	C6	358.5	359.7
C3	C4	C5	H5	178.5	180.0
H3	C3	C2	H2	358.9	0.1
C2	C3	H3	C4	180.0	180.0
H3	C3	C4	C5	182.1	179.9
S	C4	C5	C3	181.3	180.0
C1	C6	C5	C4	0.0	0.6
C5	C4	C3	H3	182.1	179.9
C6	C5	C4	H5	180.0	179.7
C4	C5	C6	H6	180.0	180.0
C5	C6	C1	C7	178.1	179.7
C1	C6	C5	H6	180.0	180.6
C4	C5	C6	H5	180.0	180.3
C4	C5	H5	C6	180.0	179.7
H5	C5	C6	H6	0.0	359.7
H6	C6	C1	C7	358.1	0.3
C1	C6	H6	C5	180.0	179.4
H6	C6	C5	H5	0.0	359.7
C1	C7	O3	N2	177.8	180.0
O3	C7	N2	C8	357.4	0.0
O3	C7	N2	HN2	177.5	180.0
C1	C7	N2	O3	182.0	180.0
C8	N2	C7	HN2	180.0	180.0
C7	N2	C8	C9	74.2	180.0
C7	N2	C8	H81	199.5	59.8
C7	N2	C8	H82	308.9	300.0
C7	N2	C8	HN2	180.0	180.0
C9	C8	N2	H81	234.7	120.2
C9	C8	N2	H82	125.3	240.0
N2	C8	C9	O4	57.1	59.9
N2	C8	C9	H91	182.3	299.9
N2	C8	C9	H92	291.8	180.0
H81	C8	N2	H82	250.6	119.9
C7	N2	HN2	C8	180.0	180.0
HN2	N2	C8	C9	254.2	0.1
HN2	N2	C8	H81	19.5	239.9
HN2	N2	C8	H82	128.9	120.0
C9	C8	N2	HN2	254.2	0.1
N2	C8	C9	H81	125.3	239.9
N2	C8	C9	H82	234.7	119.9
H81	C8	C9	H82	109.4	240.0
O4	C9	C8	H91	234.7	120.0
O4	C9	C8	H92	125.3	240.0
C8	C9	O4	C10	203.3	180.0
H91	C9	C8	H92	250.5	120.0
H81	C8	N2	HN2	19.5	239.9
N2	C8	H81	C9	228.7	120.1
N2	C8	H81	H82	114.3	240.2
C9	C8	H81	H82	245.7	120.1
H81	C8	C9	O4	291.8	180.0
H81	C8	C9	H91	57.1	60.0
H81	C8	C9	H92	166.5	300.1
H82	C8	N2	HN2	128.9	120.0
N2	C8	H82	C9	131.3	240.0
N2	C8	H82	H81	245.7	119.9
C9	C8	H82	H81	114.4	239.9
H82	C8	C9	O4	182.3	300.0
H82	C8	C9	H91	307.6	180.0
H82	C8	C9	H92	57.1	60.1
O4	C9	C8	H81	291.8	180.0
O4	C9	C8	H82	182.3	300.0
C8	C9	O4	H91	125.2	240.0
C8	C9	O4	H92	234.8	120.0
H91	C9	O4	H92	109.5	240.0
C9	O4	C10	C11	254.6	180.0
C9	O4	C10	H101	19.9	60.0
C9	O4	C10	H102	129.4	300.0
H91	C9	C8	H81	57.1	60.0
H91	C9	C8	H82	307.6	180.0
C8	C9	H91	O4	234.3	120.0
C8	C9	H91	H92	117.1	240.0
O4	C9	H91	H92	242.8	120.0
H91	C9	O4	C10	78.1	300.0
H92	C9	C8	H81	166.5	300.1
H92	C9	C8	H82	57.1	60.1
C8	C9	H92	O4	125.7	239.9
C8	C9	H92	H91	242.9	119.9
O4	C9	H92	H91	117.2	240.0
H92	C9	O4	C10	328.6	60.0
C10	O4	C9	H91	78.1	300.0
C10	O4	C9	H92	328.6	60.0
C11	C10	O4	H101	234.8	120.0
C11	C10	O4	H102	125.3	240.0
O4	C10	C11	O5	164.3	60.0
O4	C10	C11	H111	289.6	300.0
O4	C10	C11	H112	39.0	180.0
H101	C10	O4	H102	250.5	120.0
O4	C10	C11	H101	125.2	240.0
O4	C10	C11	H102	234.7	120.0
H101	C10	C11	H102	109.5	240.0
O5	C11	C10	H111	234.7	120.0
O5	C11	C10	H112	125.3	240.0
C10	C11	O5	C12	209.7	180.0
H111	C11	C10	H112	250.6	120.0
O4	C10	H101	C11	234.1	120.0
O4	C10	H101	H102	117.0	240.0
C11	C10	H101	H102	242.9	120.0
H101	C10	C11	O5	39.1	180.0
H101	C10	C11	H111	164.3	60.0
H101	C10	C11	H112	273.8	300.0
O4	C10	H102	C11	125.9	240.0
O4	C10	H102	H101	243.0	120.0
C11	C10	H102	H101	117.0	240.0
H102	C10	C11	O5	289.6	300.0
H102	C10	C11	H111	54.8	180.0
H102	C10	C11	H112	164.3	60.0
O5	C11	C10	H101	39.1	180.0
O5	C11	C10	H102	289.6	300.0
C10	C11	O5	H111	125.3	240.0
C10	C11	O5	H112	234.7	120.0
H111	C11	O5	H112	109.5	240.0
C11	O5	C12	C13	214.8	180.0
C11	O5	C12	H121	340.1	60.0
C11	O5	C12	H122	89.5	300.0
H111	C11	C10	H101	164.3	60.0
H111	C11	C10	H102	54.8	180.0
C10	C11	H111	O5	237.0	120.0
C10	C11	H111	H112	118.5	240.0
O5	C11	H111	H112	241.4	120.0
H111	C11	O5	C12	84.4	300.0
H112	C11	C10	H101	273.8	300.0
H112	C11	C10	H102	164.3	60.0
C10	C11	H112	O5	123.0	240.0
C10	C11	H112	H111	241.5	120.0
O5	C11	H112	H111	118.5	240.0
H112	C11	O5	C12	334.9	60.0
C12	O5	C11	H111	84.4	300.0
C12	O5	C11	H112	334.9	60.0
C13	C12	O5	H121	234.7	120.0
C13	C12	O5	H122	125.3	239.9
O5	C12	C13	N3	199.6	60.0
O5	C12	C13	H131	324.9	300.0
O5	C12	C13	H132	74.4	180.0
H121	C12	O5	H122	250.6	120.0
O5	C12	C13	H121	125.2	240.0
O5	C12	C13	H122	234.7	120.1
H121	C12	C13	H122	109.5	240.0
N3	C13	C12	H131	234.7	120.0
N3	C13	C12	H132	125.3	240.0
C12	C13	N3	HN31	180.0	180.0
C12	C13	N3	HN32	54.7	293.8
H131	C13	C12	H132	250.5	120.0
O5	C12	H121	C13	235.5	120.0
O5	C12	H121	H122	117.7	240.0
C13	C12	H121	H122	242.2	120.0
H121	C12	C13	N3	74.4	180.0
H121	C12	C13	H131	199.7	60.0
H121	C12	C13	H132	309.1	300.0
O5	C12	H122	C13	124.5	240.0
O5	C12	H122	H121	242.3	120.0
C13	C12	H122	H121	117.8	240.0
H122	C12	C13	N3	324.9	299.9
H122	C12	C13	H131	90.2	180.0
H122	C12	C13	H132	199.7	59.9
N3	C13	C12	H121	74.4	180.0
N3	C13	C12	H122	324.9	299.9
C12	C13	N3	H131	125.3	240.0
C12	C13	N3	H132	234.8	120.0
H131	C13	N3	H132	109.5	240.0
HN31	N3	C13	HN32	125.3	246.2
H131	C13	C12	H121	199.7	60.0
H131	C13	C12	H122	90.2	180.0
C12	C13	H131	N3	235.0	120.0
C12	C13	H131	H132	117.5	240.0
N3	C13	H131	H132	242.5	120.0
H131	C13	N3	HN31	54.7	300.0
H131	C13	N3	HN32	289.4	53.8
H132	C13	C12	H121	309.1	300.0
H132	C13	C12	H122	199.7	59.9
C12	C13	H132	N3	125.0	240.0
C12	C13	H132	H131	242.5	120.0
N3	C13	H132	H131	117.5	240.0
H132	C13	N3	HN31	305.2	60.0
H132	C13	N3	HN32	179.9	173.8
HN31	N3	C13	H131	54.7	300.0
HN31	N3	C13	H132	305.2	60.0
C13	N3	HN31	HN32	234.7	113.8
HN32	N3	C13	H131	289.4	53.8
HN32	N3	C13	H132	179.9	173.8
C13	N3	HN32	HN31	125.0	246.2