PDB Chemical Component EG1

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for EG1

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
S O1 1.419 1.421
S O2 1.440 1.421
S N1 1.446 1.655
S C4 1.631 1.762
N1 HN11 1.021 0.970
N1 HN12 1.019 0.970
C1 C2 1.442 1.396
C1 C6 1.374 1.395
C1 C7 1.430 1.478
C2 C3 1.410 1.380
C2 H2 1.104 1.080
C3 C4 1.417 1.384
C3 H3 1.103 1.080
C4 C5 1.421 1.383
C5 C6 1.397 1.379
C5 H5 1.102 1.079
C6 H6 1.102 1.080
C7 O3 1.218 1.215
C7 N2 1.292 1.348
N2 C8 1.475 1.464
N2 HN2 1.021 0.970
C8 C9 1.494 1.529
C8 H81 1.116 1.090
C8 H82 1.115 1.091
C9 O4 1.459 1.429
C9 H91 1.115 1.090
C9 H92 1.114 1.090
O4 C10 1.460 1.429
C10 C11 1.485 1.531
C10 H101 1.115 1.090
C10 H102 1.115 1.090
C11 O5 1.439 1.429
C11 H111 1.115 1.090
C11 H112 1.115 1.090
O5 C12 1.423 1.429
C12 C13 1.443 1.531
C12 H121 1.115 1.090
C12 H122 1.114 1.091
C13 N3 1.454 1.465
C13 H131 1.115 1.089
C13 H132 1.115 1.090
N3 C14 1.454 1.347
N3 HN3 1.019 0.970
C14 O6 1.219 1.213
C14 C15 1.559 1.507
C15 N4 1.509 1.469
C15 H151 1.114 1.090
C15 H152 1.116 1.088
N4 HN41 1.019 1.009
N4 HN42 1.020 1.009

Bond Angles for EG1

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O1 S O2 111.7 125.4
O1 S N1 109.5 105.8
O1 S C4 112.8 105.7
O2 S N1 115.7 105.8
O2 S C4 102.9 105.8
N1 S C4 103.8 107.4
S N1 HN11 109.5 120.1
S N1 HN12 112.2 120.0
S C4 C3 120.0 119.8
S C4 C5 122.9 119.9
HN11 N1 HN12 112.2 119.9
C2 C1 C6 121.1 119.7
C2 C1 C7 121.0 120.1
C1 C2 C3 118.8 119.8
C1 C2 H2 121.7 120.1
C6 C1 C7 117.8 120.2
C1 C6 C5 118.6 119.9
C1 C6 H6 119.9 120.1
C1 C7 O3 125.5 120.0
C1 C7 N2 116.9 120.0
C3 C2 H2 119.5 120.1
C2 C3 C4 121.2 120.1
C2 C3 H3 119.1 119.9
C4 C3 H3 119.7 119.9
C3 C4 C5 116.6 120.3
C4 C5 C6 123.5 120.1
C4 C5 H5 119.1 119.9
C6 C5 H5 117.3 119.9
C5 C6 H6 121.5 120.0
O3 C7 N2 117.6 120.0
C7 N2 C8 125.2 120.0
C7 N2 HN2 110.1 120.0
C8 N2 HN2 124.6 120.0
N2 C8 C9 116.5 109.5
N2 C8 H81 109.7 109.5
N2 C8 H82 109.6 109.4
C9 C8 H81 109.6 109.5
C9 C8 H82 109.7 109.4
C8 C9 O4 108.6 109.5
C8 C9 H91 112.5 109.4
C8 C9 H92 112.5 109.5
H81 C8 H82 100.5 109.5
O4 C9 H91 112.5 109.5
O4 C9 H92 112.6 109.4
C9 O4 C10 109.0 106.8
H91 C9 H92 97.9 109.5
O4 C10 C11 108.2 109.5
O4 C10 H101 112.6 109.5
O4 C10 H102 112.7 109.5
C11 C10 H101 112.7 109.4
C11 C10 H102 112.7 109.4
C10 C11 O5 111.4 109.4
C10 C11 H111 111.5 109.4
C10 C11 H112 111.5 109.5
H101 C10 H102 97.8 109.5
O5 C11 H111 111.5 109.5
O5 C11 H112 111.5 109.5
C11 O5 C12 106.9 106.8
H111 C11 H112 98.9 109.5
O5 C12 C13 110.7 109.5
O5 C12 H121 111.8 109.5
O5 C12 H122 111.8 109.5
C13 C12 H121 111.7 109.5
C13 C12 H122 111.7 109.4
C12 C13 N3 109.2 109.4
C12 C13 H131 112.3 109.4
C12 C13 H132 112.3 109.4
H121 C12 H122 98.7 109.5
N3 C13 H131 112.3 109.5
N3 C13 H132 112.3 109.5
C13 N3 C14 110.7 120.0
C13 N3 HN3 124.6 120.0
H131 C13 H132 98.1 109.5
C14 N3 HN3 124.7 120.0
N3 C14 O6 119.4 119.9
N3 C14 C15 117.4 120.0
O6 C14 C15 123.1 120.0
C14 C15 N4 105.4 109.5
C14 C15 H151 113.7 109.4
C14 C15 H152 113.7 109.5
N4 C15 H151 113.8 109.5
N4 C15 H152 113.7 109.5
C15 N4 HN41 105.4 106.7
C15 N4 HN42 113.7 106.8
H151 C15 H152 96.8 109.5
HN41 N4 HN42 113.8 106.7

Torsion Angles for EG1

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O2 S O1 N1 129.6 123.2
O2 S O1 C4 244.7 236.9
N1 S O1 C4 115.0 113.7
O1 S N1 HN11 180.0 67.4
O1 S N1 HN12 54.7 247.5
O1 S C4 C3 81.7 202.5
O1 S C4 C5 253.6 22.6
O1 S O2 N1 233.7 236.8
O1 S O2 C4 121.3 123.1
N1 S O2 C4 247.6 246.2
O2 S N1 HN11 52.6 292.5
O2 S N1 HN12 287.3 112.6
O2 S C4 C3 202.3 337.3
O2 S C4 C5 14.2 157.4
O1 S N1 O2 127.4 134.8
O1 S N1 C4 239.3 247.4
O2 S N1 C4 111.9 112.6
N1 S C4 C3 323.2 89.9
N1 S C4 C5 135.1 270.0
HN11 N1 S HN12 125.3 179.9
O1 S C4 O2 239.4 225.2
O1 S C4 N1 118.5 112.6
O2 S C4 N1 239.0 247.4
C4 S N1 HN11 300.7 179.9
C4 S N1 HN12 175.4 0.0
C2 C3 C4 S 177.7 180.0
S C4 C3 H3 357.8 0.1
C3 C4 S C5 188.1 179.9
S C4 C5 C6 183.0 179.7
S C4 C5 H5 3.0 359.9
HN11 N1 S C4 300.7 179.9
S N1 HN11 HN12 234.7 180.1
HN12 N1 S C4 175.4 0.0
S N1 HN12 HN11 123.8 179.9
C6 C1 C2 C7 181.6 180.3
C2 C1 C6 C5 359.3 359.4
C2 C1 C6 H6 179.4 180.0
C2 C1 C7 O3 180.3 360.0
C2 C1 C7 N2 359.6 180.0
C3 C2 C1 H2 180.0 180.0
C1 C2 C3 C4 356.3 0.1
C1 C2 C3 H3 176.3 180.0
C2 C1 C6 C7 178.4 179.7
C6 C1 C2 C3 1.3 0.2
C6 C1 C2 H2 181.2 180.2
C6 C1 C7 O3 358.7 179.7
C6 C1 C7 N2 178.1 359.7
C4 C5 C6 C1 2.6 0.5
C1 C6 C5 H5 182.6 180.3
C5 C6 C1 H6 180.0 179.4
C2 C1 C7 C6 181.5 180.3
C7 C1 C2 C3 179.7 180.0
C7 C1 C2 H2 359.6 360.0
C7 C1 C6 C5 180.9 179.7
C7 C1 C6 H6 0.9 0.3
O3 C7 C1 N2 180.7 180.0
C1 C7 N2 C8 178.0 180.0
C1 C7 N2 HN2 358.0 360.0
S C4 C3 C2 177.7 180.0
C3 C2 C1 C6 1.3 0.2
C3 C2 C1 C7 179.7 180.0
C1 C2 C3 H2 180.0 180.0
C4 C3 C2 H3 180.0 180.1
C2 C3 C4 C5 5.3 359.9
H2 C2 C1 C6 181.2 180.2
H2 C2 C1 C7 359.6 360.0
C1 C2 H2 C3 180.0 180.0
H2 C2 C3 C4 176.3 180.1
H2 C2 C3 H3 356.3 360.0
S C4 C3 C5 172.4 180.1
C4 C3 C2 H2 176.3 180.1
C2 C3 C4 H3 180.0 179.9
C3 C4 C5 C6 355.2 359.8
C3 C4 C5 H5 175.1 180.0
H3 C3 C2 H2 356.3 360.0
C2 C3 H3 C4 180.0 180.1
H3 C3 C4 C5 185.4 180.0
S C4 C5 C3 187.8 179.9
C1 C6 C5 C4 2.6 0.5
C5 C4 C3 H3 185.4 180.0
C6 C5 C4 H5 180.0 179.8
C4 C5 C6 H6 182.5 180.0
C5 C6 C1 C7 180.9 179.7
C1 C6 C5 H6 180.0 180.6
C4 C5 C6 H5 180.0 180.2
C4 C5 H5 C6 180.0 179.8
H5 C5 C6 H6 2.6 359.8
H6 C6 C1 C7 0.9 0.3
C1 C6 H6 C5 180.0 179.4
H6 C6 C5 H5 2.6 359.8
C1 C7 O3 N2 179.3 180.0
O3 C7 N2 C8 357.3 0.0
O3 C7 N2 HN2 177.3 180.0
C1 C7 N2 O3 180.6 180.0
C8 N2 C7 HN2 180.0 180.0
C7 N2 C8 C9 69.2 180.0
C7 N2 C8 H81 194.5 60.0
C7 N2 C8 H82 303.9 300.0
C7 N2 C8 HN2 180.0 180.0
C9 C8 N2 H81 234.7 120.1
C9 C8 N2 H82 125.3 240.1
N2 C8 C9 O4 69.8 60.0
N2 C8 C9 H91 195.1 300.0
N2 C8 C9 H92 304.6 180.0
H81 C8 N2 H82 250.6 120.0
C7 N2 HN2 C8 180.0 180.0
HN2 N2 C8 C9 249.2 0.1
HN2 N2 C8 H81 14.4 240.0
HN2 N2 C8 H82 123.9 120.0
C9 C8 N2 HN2 249.2 0.1
N2 C8 C9 H81 125.3 239.9
N2 C8 C9 H82 234.7 119.9
H81 C8 C9 H82 109.4 240.0
O4 C9 C8 H91 234.8 120.0
O4 C9 C8 H92 125.3 240.0
C8 C9 O4 C10 215.2 180.1
H91 C9 C8 H92 250.5 120.0
H81 C8 N2 HN2 14.4 240.0
N2 C8 H81 C9 230.9 120.1
N2 C8 H81 H82 115.4 240.1
C9 C8 H81 H82 244.6 120.0
H81 C8 C9 O4 304.5 180.1
H81 C8 C9 H91 69.8 60.0
H81 C8 C9 H92 179.3 300.0
H82 C8 N2 HN2 123.9 120.0
N2 C8 H82 C9 129.1 240.0
N2 C8 H82 H81 244.6 120.0
C9 C8 H82 H81 115.4 240.0
H82 C8 C9 O4 195.1 300.1
H82 C8 C9 H91 320.3 180.1
H82 C8 C9 H92 69.8 60.0
O4 C9 C8 H81 304.5 180.1
O4 C9 C8 H82 195.1 300.1
C8 C9 O4 H91 125.2 240.0
C8 C9 O4 H92 234.8 120.0
H91 C9 O4 H92 109.5 240.0
C9 O4 C10 C11 278.3 180.0
C9 O4 C10 H101 43.5 60.0
C9 O4 C10 H102 153.0 299.9
H91 C9 C8 H81 69.8 60.0
H91 C9 C8 H82 320.3 180.1
C8 C9 H91 O4 236.9 120.0
C8 C9 H91 H92 118.5 240.0
O4 C9 H91 H92 241.5 120.0
H91 C9 O4 C10 90.0 300.1
H92 C9 C8 H81 179.3 300.0
H92 C9 C8 H82 69.8 60.0
C8 C9 H92 O4 123.1 240.0
C8 C9 H92 H91 241.5 120.0
O4 C9 H92 H91 118.5 240.0
H92 C9 O4 C10 340.4 60.0
C10 O4 C9 H91 90.0 300.1
C10 O4 C9 H92 340.4 60.0
C11 C10 O4 H101 234.7 120.0
C11 C10 O4 H102 125.3 240.0
O4 C10 C11 O5 162.8 60.0
O4 C10 C11 H111 288.1 299.9
O4 C10 C11 H112 37.5 180.0
H101 C10 O4 H102 250.5 120.1
O4 C10 C11 H101 125.2 240.0
O4 C10 C11 H102 234.7 120.0
H101 C10 C11 H102 109.5 240.0
O5 C11 C10 H111 234.7 120.0
O5 C11 C10 H112 125.3 240.0
C10 C11 O5 C12 181.1 180.0
H111 C11 C10 H112 250.6 120.0
O4 C10 H101 C11 237.2 120.0
O4 C10 H101 H102 118.6 239.9
C11 C10 H101 H102 241.4 119.9
H101 C10 C11 O5 37.6 180.0
H101 C10 C11 H111 162.9 60.0
H101 C10 C11 H112 272.3 300.0
O4 C10 H102 C11 122.8 240.0
O4 C10 H102 H101 241.5 120.1
C11 C10 H102 H101 118.6 240.1
H102 C10 C11 O5 288.1 300.0
H102 C10 C11 H111 53.3 179.9
H102 C10 C11 H112 162.8 59.9
O5 C11 C10 H101 37.6 180.0
O5 C11 C10 H102 288.1 300.0
C10 C11 O5 H111 125.3 240.1
C10 C11 O5 H112 234.7 120.0
H111 C11 O5 H112 109.5 239.9
C11 O5 C12 C13 336.0 180.0
C11 O5 C12 H121 101.2 60.0
C11 O5 C12 H122 210.8 300.0
H111 C11 C10 H101 162.9 60.0
H111 C11 C10 H102 53.3 179.9
C10 C11 H111 O5 234.8 120.0
C10 C11 H111 H112 117.4 240.0
O5 C11 H111 H112 242.6 120.1
H111 C11 O5 C12 55.8 299.9
H112 C11 C10 H101 272.3 300.0
H112 C11 C10 H102 162.8 59.9
C10 C11 H112 O5 125.2 240.0
C10 C11 H112 H111 242.6 119.9
O5 C11 H112 H111 117.4 239.9
H112 C11 O5 C12 306.3 60.0
C12 O5 C11 H111 55.8 299.9
C12 O5 C11 H112 306.3 60.0
C13 C12 O5 H121 234.8 120.0
C13 C12 O5 H122 125.2 240.0
O5 C12 C13 N3 212.4 60.0
O5 C12 C13 H131 337.7 300.0
O5 C12 C13 H132 87.1 180.0
H121 C12 O5 H122 250.5 120.0
O5 C12 C13 H121 125.3 240.0
O5 C12 C13 H122 234.7 120.0
H121 C12 C13 H122 109.5 240.0
N3 C13 C12 H131 234.7 120.0
N3 C13 C12 H132 125.3 240.0
C12 C13 N3 C14 180.3 180.0
C12 C13 N3 HN3 0.2 0.0
H131 C13 C12 H132 250.6 120.0
O5 C12 H121 C13 235.3 120.0
O5 C12 H121 H122 117.7 240.0
C13 C12 H121 H122 242.4 120.0
H121 C12 C13 N3 87.1 180.0
H121 C12 C13 H131 212.4 60.0
H121 C12 C13 H132 321.8 300.0
O5 C12 H122 C13 124.7 240.0
O5 C12 H122 H121 242.3 120.0
C13 C12 H122 H121 117.6 240.0
H122 C12 C13 N3 337.7 300.0
H122 C12 C13 H131 103.0 180.0
H122 C12 C13 H132 212.4 60.0
N3 C13 C12 H121 87.1 180.0
N3 C13 C12 H122 337.7 300.0
C12 C13 N3 H131 125.3 240.1
C12 C13 N3 H132 234.7 120.0
H131 C13 N3 H132 109.4 239.9
C14 N3 C13 HN3 180.0 180.0
C13 N3 C14 O6 347.9 360.0
C13 N3 C14 C15 166.2 180.0
H131 C13 C12 H121 212.4 60.0
H131 C13 C12 H122 103.0 180.0
C12 C13 H131 N3 236.4 120.0
C12 C13 H131 H132 118.2 240.1
N3 C13 H131 H132 241.8 120.1
H131 C13 N3 C14 55.0 299.9
H131 C13 N3 HN3 235.0 120.0
H132 C13 C12 H121 321.8 300.0
H132 C13 C12 H122 212.4 60.0
C12 C13 H132 N3 123.6 240.0
C12 C13 H132 H131 241.8 119.9
N3 C13 H132 H131 118.2 239.9
H132 C13 N3 C14 305.6 60.0
H132 C13 N3 HN3 125.5 240.1
C14 N3 C13 H131 55.0 299.9
C14 N3 C13 H132 305.6 60.0
C13 N3 C14 HN3 180.0 180.0
O6 C14 N3 C15 181.7 180.0
N3 C14 C15 N4 359.5 180.0
N3 C14 C15 H151 124.8 60.0
N3 C14 C15 H152 234.3 300.0
HN3 N3 C13 H131 235.0 120.0
HN3 N3 C13 H132 125.5 240.1
C13 N3 HN3 C14 180.0 180.0
HN3 N3 C14 O6 168.0 179.9
HN3 N3 C14 C15 346.2 360.0
O6 C14 N3 HN3 168.0 179.9
N3 C14 O6 C15 178.2 180.0
O6 C14 C15 N4 177.7 0.0
O6 C14 C15 H151 303.0 240.0
O6 C14 C15 H152 52.5 120.0
C15 C14 N3 HN3 346.2 360.0
N3 C14 C15 O6 181.8 180.0
N4 C15 C14 H151 234.7 120.0
N4 C15 C14 H152 125.2 240.0
C14 C15 N4 HN41 180.0 180.0
C14 C15 N4 HN42 54.7 293.8
H151 C15 C14 H152 250.5 120.0
C14 C15 N4 H151 125.2 240.0
C14 C15 N4 H152 234.8 120.0
H151 C15 N4 H152 109.5 240.0
HN41 N4 C15 HN42 125.3 246.2
C14 C15 H151 N4 239.3 120.0
C14 C15 H151 H152 119.6 240.0
N4 C15 H151 H152 240.3 120.0
H151 C15 N4 HN41 54.8 300.0
H151 C15 N4 HN42 289.5 53.7
C14 C15 H152 N4 120.7 240.0
C14 C15 H152 H151 240.4 120.0
N4 C15 H152 H151 119.7 240.0
H152 C15 N4 HN41 305.3 60.0
H152 C15 N4 HN42 179.9 173.8
HN41 N4 C15 H151 54.8 300.0
HN41 N4 C15 H152 305.3 60.0
C15 N4 HN41 HN42 234.7 113.8
HN42 N4 C15 H151 289.5 53.7
HN42 N4 C15 H152 179.9 173.8
C15 N4 HN42 HN41 120.7 246.2