PDB Chemical Component EEF

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for EEF

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O7 C8 1.181 1.208
C8 O6 1.392 1.342
C8 C5 1.526 1.507
C5 C4 1.526 1.531
C1 C2 1.542 1.507
C1 C14 1.535 1.530
C2 N1 1.458 1.348
C2 O2 1.206 1.213
C14 C18 1.546 1.506
N1 C3 1.471 1.465
C4 C3 1.544 1.530
C31 C18 1.511 1.383
C31 C30 1.416 1.381
C18 C15 1.380 1.383
C3 C9 1.526 1.507
C30 C17 1.429 1.393
C15 C16 1.450 1.381
C23 C22 1.443 1.380
C23 C19 1.337 1.393
C17 C16 1.458 1.393
C17 C19 1.528 1.484
C9 O1 1.197 1.214
C9 N2 1.447 1.347
C22 C27 1.429 1.384
C19 C20 1.492 1.394
N2 C10 1.448 1.464
O5 C13 1.187 1.213
C27 C21 1.411 1.383
C20 C21 1.386 1.380
C13 C10 1.517 1.507
C13 N3 1.448 1.348
C10 C11 1.533 1.531
C11 C12 1.546 1.531
C12 C32 1.540 1.506
O34 C32 1.184 1.208
C32 O33 1.412 1.343
C1 H1 1.100 1.091
C1 H2 1.100 1.090
N1 H3 1.000 0.970
N2 H4 1.000 0.970
C3 H5 1.100 1.090
N3 H6 1.000 0.969
N3 H7 0.999 0.970
C4 H8 1.100 1.090
C5 H9 1.100 1.090
O6 H10 0.950 0.967
C10 H11 1.100 1.090
C11 H12 1.100 1.090
C11 H13 1.100 1.090
C12 H14 1.100 1.090
C12 H15 1.100 1.090
C14 H16 1.100 1.091
C14 H17 1.100 1.090
C15 H18 1.080 1.080
C16 H19 1.080 1.080
C20 H20 1.080 1.081
C21 H21 1.080 1.080
C22 H22 1.080 1.080
C23 H23 1.080 1.080
C27 H24 1.081 1.080
C30 H25 1.079 1.080
C31 H26 1.080 1.080
O33 H27 0.950 0.967
C4 H28 1.100 1.090
C5 H29 1.100 1.089

Bond Angles for EEF

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O7 C8 O6 117.8 120.0
C8 O6 H10 109.5 117.0
C8 C5 H9 108.0 109.5
C8 C5 H29 108.0 109.5
C5 C4 H8 107.2 109.5
C5 C4 H28 107.2 109.5
C2 C1 C14 112.7 109.5
C1 C2 N1 116.7 120.0
C1 C2 O2 120.2 120.0
C2 C1 H1 108.7 109.5
C2 C1 H2 108.7 109.5
C1 C14 C18 117.3 109.5
C14 C1 H1 108.7 109.4
C14 C1 H2 108.6 109.5
C1 C14 H16 107.5 109.4
C1 C14 H17 107.5 109.4
O2 C2 N1 123.0 120.1
C2 N1 C3 119.1 120.0
C2 N1 H3 120.4 120.0
C14 C18 C15 118.3 119.9
C18 C14 H16 107.5 109.5
C18 C14 H17 107.5 109.5
N1 C3 C9 108.3 109.5
C3 N1 H3 120.4 120.0
N1 C3 H5 110.0 109.5
C4 C3 H5 109.1 109.5
C31 C30 H25 119.9 120.1
C18 C15 H18 119.5 120.0
C3 C9 O1 119.6 120.0
C3 C9 N2 118.1 120.0
C9 C3 H5 109.3 109.4
C16 C15 H18 119.5 119.9
C15 C16 H19 120.9 120.0
C23 C22 C27 120.9 120.1
C23 C22 H22 119.5 120.0
C17 C16 H19 121.0 120.1
C17 C19 C20 118.9 120.1
O1 C9 N2 120.6 120.0
C9 N2 C10 116.8 120.0
C9 N2 H4 121.6 120.0
C27 C22 H22 119.5 119.9
C22 C27 H24 119.9 119.9
C19 C20 C21 120.1 119.9
C19 C20 H20 119.9 120.0
N2 C10 C11 115.2 109.5
C10 N2 H4 121.6 120.0
N2 C10 H11 106.9 109.5
O5 C13 N3 122.5 120.0
C27 C21 H21 120.5 119.9
C21 C20 H20 119.9 120.1
C20 C21 H21 120.5 119.9
C13 C10 C11 111.3 109.4
C13 C10 H11 106.1 109.4
C13 N3 H6 120.0 119.9
C13 N3 H7 120.0 120.0
C10 C11 C12 116.8 109.5
C11 C10 H11 106.0 109.4
C10 C11 H12 107.6 109.4
C10 C11 H13 107.6 109.5
C11 C12 C32 120.4 109.5
C12 C11 H12 107.6 109.4
C12 C11 H13 107.6 109.5
C11 C12 H14 106.7 109.4
C11 C12 H15 106.7 109.5
C12 C32 O33 119.9 120.0
C32 C12 H14 106.7 109.5
C32 C12 H15 106.7 109.5
O34 C32 O33 118.9 120.0
C32 O33 H27 109.5 117.0
H1 C1 H2 109.5 109.5
H6 N3 H7 120.0 120.1
H8 C4 H28 109.5 109.5
H9 C5 H29 109.4 109.5
H12 C11 H13 109.4 109.5
H14 C12 H15 109.5 109.5
H16 C14 H17 109.5 109.5

Torsion Angles for EEF

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O7 C8 O6 H10 0.0 360.0
O7 C8 C5 H9 27.9 240.0
O7 C8 C5 H29 146.2 119.9
O6 C8 C5 H9 230.4 60.1
O6 C8 C5 H29 348.7 300.0
C8 C5 C4 H8 293.9 60.1
C8 C5 C4 H28 51.4 300.0
H9 C5 C8 H29 241.7 120.1
C5 C4 C3 H5 51.4 55.0
H8 C4 C5 H28 242.5 120.1
C2 C1 C14 C18 101.5 180.0
C14 C1 C2 H1 239.5 240.1
C14 C1 C2 H2 120.4 120.0
C2 C1 C14 H16 222.6 300.0
C2 C1 C14 H17 340.3 60.0
O2 C2 C1 N1 176.2 180.0
C1 C2 N1 C3 176.1 180.0
C1 C2 N1 H3 356.0 0.1
H1 C1 C2 H2 240.9 240.0
C14 C1 C2 N1 237.5 180.0
C14 C1 C2 O2 53.7 0.0
C2 C1 C14 H1 120.5 120.0
C2 C1 C14 H2 239.6 239.9
C1 C14 C18 C15 194.2 90.0
C18 C14 C1 H16 238.9 240.0
C18 C14 C1 H17 121.1 120.0
H1 C1 C14 H2 119.1 120.0
H16 C14 C1 H17 242.2 240.0
N1 C2 C1 C14 237.5 180.0
C1 C2 N1 O2 176.1 180.0
N1 C2 C1 H1 358.0 299.9
N1 C2 C1 H2 117.0 60.0
C2 N1 C3 C9 254.0 205.0
C3 N1 C2 H3 180.0 179.9
C2 N1 C3 H5 13.5 325.0
O2 C2 C1 C14 53.7 0.0
C1 C2 O2 N1 184.0 180.0
O2 C2 C1 H1 174.2 120.0
O2 C2 C1 H2 293.2 240.0
O2 C2 N1 C3 359.9 360.0
O2 C2 N1 H3 179.9 180.0
C18 C14 C1 H1 341.0 60.0
C18 C14 C1 H2 221.9 300.1
C1 C14 C18 H16 121.1 119.9
C1 C14 C18 H17 238.9 240.0
C14 C18 C15 H18 2.8 0.3
H16 C14 C18 H17 117.8 120.1
C2 N1 C3 H3 180.0 180.1
C4 C3 N1 H5 121.2 120.0
N1 C3 C9 O1 324.0 0.0
N1 C3 C9 N2 158.6 180.0
C9 C3 N1 H5 240.6 240.0
C4 C3 N1 H3 314.6 265.0
N1 C3 C4 H5 238.3 240.0
C4 C3 C9 N2 279.8 300.0
C9 C3 C4 H5 119.0 120.0
C31 C18 C14 H16 255.3 150.0
C31 C18 C14 H17 137.6 29.9
C31 C18 C15 H18 180.5 180.3
C15 C18 C14 H16 73.1 330.0
C15 C18 C14 H17 315.3 210.0
C16 C15 C18 H18 180.0 179.7
C18 C15 C16 H19 179.6 180.3
C9 C3 N1 H3 74.1 25.0
N1 C3 C9 H5 119.9 120.0
C4 C3 C9 H5 241.2 240.0
O1 C9 C3 N2 165.4 180.0
C3 C9 N2 C10 171.5 180.0
C3 C9 N2 H4 351.6 0.0
C30 C17 C16 H19 180.2 179.9
C14 C18 C15 C16 182.8 180.0
C18 C15 C16 H18 180.0 180.3
C17 C16 C15 H19 180.0 180.0
C27 C22 C23 H22 180.0 179.8
C23 C22 C27 H24 180.8 180.1
C23 C19 C20 H20 180.3 180.3
C17 C16 C15 H18 179.6 180.0
C15 C16 C17 H19 180.0 180.0
C19 C17 C16 H19 360.0 0.1
C17 C19 C20 C21 180.7 180.0
C17 C19 C20 H20 0.7 360.0
C3 C9 O1 N2 194.9 180.0
O1 C9 C3 H5 204.1 240.0
O1 C9 N2 C10 6.2 360.0
O1 C9 N2 H4 186.3 180.0
C3 C9 N2 O1 165.3 180.0
N2 C9 C3 H5 38.7 60.0
C9 N2 C10 C11 167.1 155.0
C10 N2 C9 H4 180.0 179.9
C9 N2 C10 H11 49.7 35.0
C23 C22 C27 H22 180.0 180.2
C22 C27 C21 H21 179.3 179.8
C21 C20 C19 H20 180.0 180.0
C19 C20 C21 H21 180.2 180.0
C9 N2 C10 H4 180.0 180.1
C13 C10 N2 C11 127.4 120.0
C13 C10 N2 H11 244.9 240.0
N2 C10 C11 C12 239.5 295.0
C11 C10 N2 H11 117.4 120.0
N2 C10 C11 H12 0.6 55.0
N2 C10 C11 H13 118.5 175.0
O5 C13 C10 C11 90.8 120.0
O5 C13 C10 H11 205.7 240.0
O5 C13 N3 H6 0.0 180.0
O5 C13 N3 H7 180.0 0.0
C27 C21 C20 H20 180.2 180.0
C20 C21 C27 H21 180.0 180.0
C19 C20 C21 H20 180.0 180.0
C27 C21 C20 H21 180.0 180.0
N2 C10 C13 C11 230.5 240.0
C13 C10 N2 H4 114.5 94.9
N2 C10 C13 H11 115.6 120.0
C13 C10 C11 C12 112.4 175.0
C11 C10 C13 H11 245.2 240.1
C13 C10 C11 H12 233.5 294.9
C13 C10 C11 H13 351.4 55.0
N3 C13 C10 C11 273.6 300.0
N3 C13 C10 H11 28.4 60.0
H6 N3 C13 H7 180.0 180.0
C11 C10 N2 H4 347.1 334.9
N2 C10 C11 H11 242.0 240.0
C13 C10 C11 H11 114.9 119.9
C10 C11 C12 C32 283.0 180.0
C12 C11 C10 H12 238.9 240.1
C12 C11 C10 H13 121.1 120.0
C10 C11 C12 H14 44.6 300.0
C10 C11 C12 H15 161.5 60.0
H12 C11 C10 H13 242.2 239.9
C12 C11 C10 H11 357.5 55.1
C10 C11 C12 H12 121.1 119.9
C10 C11 C12 H13 238.9 240.0
C11 C12 C32 O33 179.6 180.0
C32 C12 C11 H14 238.5 240.0
C32 C12 C11 H15 121.5 120.0
H12 C11 C12 H13 117.9 120.1
H14 C12 C11 H15 243.1 240.0
C32 C12 C11 H12 162.0 60.0
C32 C12 C11 H13 44.1 300.0
C11 C12 C32 H14 121.5 120.0
C11 C12 C32 H15 238.5 240.0
O34 C32 C12 O33 166.8 180.0
C12 C32 O33 H27 166.9 180.0
H14 C12 C32 H15 117.0 120.0
C12 C32 O34 O33 193.1 180.0
O34 C32 C12 H14 224.8 240.0
O34 C32 C12 H15 107.9 120.0
O34 C32 O33 H27 0.0 0.0
O33 C32 C12 H14 58.0 60.0
O33 C32 C12 H15 301.1 300.0
C2 C1 H1 C14 237.1 240.0
H1 C1 C2 N1 358.0 299.9
H1 C1 C2 O2 174.2 120.0
C2 C1 H1 H2 118.5 120.0
H1 C1 C14 C18 341.0 60.0
C14 C1 H1 H2 241.5 240.0
H1 C1 C14 H16 102.1 180.0
H1 C1 C14 H17 219.9 300.0
C2 C1 H2 C14 122.9 120.0
H2 C1 C2 N1 117.0 60.0
H2 C1 C2 O2 293.2 240.0
C2 C1 H2 H1 241.5 240.0
H2 C1 C14 C18 221.9 300.1
C14 C1 H2 H1 118.6 119.9
H2 C1 C14 H16 343.0 60.0
H2 C1 C14 H17 100.8 180.0
C2 N1 H3 C3 180.0 179.9
H3 N1 C3 C9 74.1 25.0
H3 N1 C3 H5 193.5 145.0
C9 N2 H4 C10 180.0 179.9
H4 N2 C10 C11 347.1 334.9
H4 N2 C10 H11 229.6 215.0
N1 C3 H5 C9 241.2 240.0
H5 C3 N1 H3 193.5 145.0
H5 C3 C9 O1 204.1 240.0
H5 C3 C9 N2 38.7 60.0
C13 N3 H6 H7 180.0 180.0
C13 N3 H7 H6 180.0 180.0
C5 C4 H8 H28 116.0 240.0
H8 C4 C3 H5 290.1 175.0
C8 C5 H9 H29 117.3 239.9
H9 C5 C4 H8 173.0 180.0
H9 C5 C4 H28 290.5 60.0
N2 C10 H11 C11 123.4 120.0
H11 C10 N2 H4 229.6 215.0
C13 C10 H11 C11 241.5 240.1
H11 C10 C11 C12 357.5 55.1
H11 C10 C11 H12 118.6 175.0
H11 C10 C11 H13 236.4 295.1
C10 C11 H12 C12 233.3 240.1
H12 C11 C10 H11 118.6 175.0
C10 C11 H12 H13 116.6 120.0
H12 C11 C12 C32 162.0 60.0
C12 C11 H12 H13 243.3 240.0
H12 C11 C12 H14 283.5 180.1
H12 C11 C12 H15 40.4 300.0
C10 C11 H13 C12 126.7 120.0
H13 C11 C10 H11 236.4 295.1
C10 C11 H13 H12 243.4 240.0
H13 C11 C12 C32 44.1 300.0
C12 C11 H13 H12 116.7 120.0
H13 C11 C12 H14 165.6 60.0
H13 C11 C12 H15 282.6 180.0
C11 C12 H14 C32 230.1 240.0
H14 C12 C11 H12 283.5 180.1
H14 C12 C11 H13 165.6 60.0
C11 C12 H14 H15 115.0 120.0
H14 C12 C32 O33 58.0 60.0
C32 C12 H14 H15 244.9 240.0
C11 C12 H15 C32 129.9 120.0
H15 C12 C11 H12 40.4 300.0
H15 C12 C11 H13 282.6 180.0
C11 C12 H15 H14 244.9 240.0
H15 C12 C32 O33 301.1 300.0
C32 C12 H15 H14 115.1 120.0
C1 C14 H16 C18 232.9 240.0
H16 C14 C1 H1 102.1 180.0
H16 C14 C1 H2 343.0 60.0
C1 C14 H16 H17 116.5 119.9
H16 C14 C18 C15 73.1 330.0
C18 C14 H16 H17 243.6 239.9
C1 C14 H17 C18 127.1 120.0
H17 C14 C1 H1 219.9 300.0
H17 C14 C1 H2 100.8 180.0
C1 C14 H17 H16 243.5 240.1
H17 C14 C18 C15 315.3 210.0
C18 C14 H17 H16 116.4 120.1
H18 C15 C16 H19 359.6 360.0
H19 C16 C15 H18 359.6 360.0
C19 C20 H20 C21 180.0 180.0
H20 C20 C21 H21 0.2 360.0
H21 C21 C20 H20 0.2 360.0
C23 C22 H22 C27 180.0 179.8
H22 C22 C27 H24 0.8 359.8
H23 C23 C22 C27 179.6 180.0
H23 C23 C22 H22 359.6 0.3
H24 C27 C22 H22 0.8 359.8
H24 C27 C21 H21 359.3 359.9
H26 C31 C30 H25 0.1 359.8
C5 C4 H28 H8 244.0 120.0
H28 C4 C3 H5 172.6 295.0
C8 C5 H29 H9 242.7 120.1
H29 C5 C4 H8 54.8 300.1
H29 C5 C4 H28 172.3 180.0