PDB Chemical Component EDT

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for EDT

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O20	C5	1.220	1.343
O20	H20	0.950	0.967
C5	O19	1.437	1.208
C5	C4	1.510	1.507
C4	N3	1.459	1.469
C4	H041	1.114	1.090
C4	H042	1.115	1.089
N3	C2	1.458	1.467
N3	C6	1.459	1.469
C2	C1	1.514	1.507
C2	H021	1.115	1.090
C2	H022	1.114	1.090
C1	O18	1.325	1.208
C1	O17	1.220	1.342
O17	H17	0.949	0.966
C6	C7	1.524	1.529
C6	H061	1.115	1.089
C6	H062	1.116	1.089
C7	N8	1.460	1.469
C7	H071	1.114	1.090
C7	H072	1.115	1.091
N8	C9	1.458	1.469
N8	C11	1.461	1.469
C9	C10	1.519	1.507
C9	H091	1.115	1.089
C9	H092	1.114	1.090
C10	O16	1.318	1.342
C10	O15	1.221	1.208
O16	H16	0.951	0.967
C11	C12	1.496	1.507
C11	H111	1.115	1.090
C11	H112	1.115	1.090
C12	O13	1.201	1.208
C12	O14	1.421	1.342
O14	H14	0.949	0.967

Bond Angles for EDT

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C5	O20	H20	118.2	120.0
O20	C5	O19	118.2	120.0
O20	C5	C4	118.0	120.0
O19	C5	C4	123.6	120.0
C5	C4	N3	105.7	109.4
C5	C4	H041	113.6	109.5
C5	C4	H042	113.6	109.5
N3	C4	H041	113.6	109.4
N3	C4	H042	113.6	109.5
C4	N3	C2	118.1	106.7
C4	N3	C6	115.9	106.7
H041	C4	H042	96.9	109.5
C2	N3	C6	126.0	106.8
N3	C2	C1	103.6	109.5
N3	C2	H021	114.4	109.5
N3	C2	H022	114.4	109.5
N3	C6	C7	115.3	109.5
N3	C6	H061	110.1	109.4
N3	C6	H062	110.1	109.5
C1	C2	H021	114.4	109.4
C1	C2	H022	114.4	109.4
C2	C1	O18	122.5	120.0
C2	C1	O17	120.2	120.0
H021	C2	H022	96.1	109.5
O18	C1	O17	117.3	120.0
C1	O17	H17	120.2	120.0
C7	C6	H061	110.1	109.5
C7	C6	H062	110.1	109.5
C6	C7	N8	114.2	109.5
C6	C7	H071	110.5	109.5
C6	C7	H072	110.5	109.4
H061	C6	H062	100.1	109.5
N8	C7	H071	110.5	109.5
N8	C7	H072	110.5	109.5
C7	N8	C9	123.3	106.7
C7	N8	C11	116.7	106.7
H071	C7	H072	99.8	109.4
C9	N8	C11	117.5	106.7
N8	C9	C10	101.3	109.5
N8	C9	H091	115.3	109.5
N8	C9	H092	115.4	109.5
N8	C11	C12	116.4	109.4
N8	C11	H111	109.7	109.5
N8	C11	H112	109.7	109.5
C10	C9	H091	115.3	109.5
C10	C9	H092	115.3	109.5
C9	C10	O16	117.5	120.0
C9	C10	O15	124.6	120.0
H091	C9	H092	95.1	109.5
O16	C10	O15	117.9	120.0
C10	O16	H16	117.6	120.0
C12	C11	H111	109.7	109.5
C12	C11	H112	109.7	109.5
C11	C12	O13	120.7	120.0
C11	C12	O14	120.0	120.0
H111	C11	H112	100.4	109.5
O13	C12	O14	119.2	120.0
C12	O14	H14	120.0	120.0

Torsion Angles for EDT

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O19	C5	O20	C4	175.4	180.0
O20	C5	C4	N3	178.0	180.0
O20	C5	C4	H041	303.3	299.9
O20	C5	C4	H042	52.8	60.0
H20	O20	C5	O19	180.0	360.0
H20	O20	C5	C4	4.6	180.0
O19	C5	O20	H20	180.0	360.0
O20	C5	O19	C4	184.9	180.0
O19	C5	C4	N3	2.9	360.0
O19	C5	C4	H041	128.2	119.9
O19	C5	C4	H042	237.7	240.0
C4	C5	O20	H20	4.6	180.0
O20	C5	C4	O19	175.1	180.0
N3	C4	C5	H041	234.7	240.1
N3	C4	C5	H042	125.2	120.0
C5	C4	N3	C2	100.6	293.8
C5	C4	N3	C6	279.9	180.0
H041	C4	C5	H042	250.5	240.0
C5	C4	N3	H041	125.2	120.0
C5	C4	N3	H042	234.8	240.0
H041	C4	N3	H042	109.5	120.0
C2	N3	C4	C6	180.7	113.8
C4	N3	C2	C1	86.2	163.2
C4	N3	C2	H021	211.5	283.2
C4	N3	C2	H022	321.0	43.3
C4	N3	C6	C7	153.5	292.4
C4	N3	C6	H061	278.8	52.4
C4	N3	C6	H062	28.3	172.3
C5	C4	H041	N3	239.1	240.1
C5	C4	H041	H042	119.5	120.0
N3	C4	H041	H042	240.5	240.0
H041	C4	N3	C2	335.4	173.8
H041	C4	N3	C6	154.7	60.0
C5	C4	H042	N3	120.9	120.0
C5	C4	H042	H041	240.5	240.0
N3	C4	H042	H041	119.6	120.0
H042	C4	N3	C2	225.9	53.8
H042	C4	N3	C6	45.2	300.0
C2	N3	C4	H041	335.4	173.8
C2	N3	C4	H042	225.9	53.8
C4	N3	C2	C6	179.2	246.2
C2	N3	C6	C7	332.8	178.6
C2	N3	C6	H061	98.1	298.6
C2	N3	C6	H062	207.5	58.6
C1	C2	N3	H021	234.7	240.0
C1	C2	N3	H022	125.3	120.0
N3	C2	C1	O18	161.6	358.0
N3	C2	C1	O17	341.8	178.0
H021	C2	N3	H022	250.5	239.9
C6	N3	C4	H041	154.7	60.0
C6	N3	C4	H042	45.2	300.0
C4	N3	C6	C2	180.8	113.8
C6	N3	C2	C1	267.0	277.0
C6	N3	C2	H021	32.2	37.0
C6	N3	C2	H022	141.7	157.0
C7	C6	N3	H061	234.7	240.0
C7	C6	N3	H062	125.3	120.0
N3	C6	C7	N8	268.2	185.9
N3	C6	C7	H071	33.5	306.0
N3	C6	C7	H072	143.0	65.9
H061	C6	N3	H062	250.5	240.0
C1	C2	N3	C6	267.0	277.0
N3	C2	C1	H021	125.2	120.0
N3	C2	C1	H022	234.8	240.0
H021	C2	C1	H022	109.5	120.0
O18	C1	C2	O17	179.8	180.0
C2	C1	O17	H17	180.0	180.1
H021	C2	N3	C6	32.2	37.0
N3	C2	H021	C1	240.7	240.0
N3	C2	H021	H022	120.3	120.1
C1	C2	H021	H022	239.6	240.1
H021	C2	C1	O18	36.4	238.0
H021	C2	C1	O17	216.6	58.0
H022	C2	N3	C6	141.7	157.0
N3	C2	H022	C1	119.3	120.0
N3	C2	H022	H021	239.7	240.0
C1	C2	H022	H021	120.4	120.0
H022	C2	C1	O18	286.9	118.1
H022	C2	C1	O17	107.1	298.0
O18	C1	C2	H021	36.4	238.0
O18	C1	C2	H022	286.9	118.1
C2	C1	O18	O17	180.2	180.0
O18	C1	O17	H17	0.1	0.0
O17	C1	C2	H021	216.6	58.0
O17	C1	C2	H022	107.1	298.0
C2	C1	O17	O18	179.8	180.0
N3	C6	C7	H061	125.3	120.0
N3	C6	C7	H062	234.7	240.0
H061	C6	C7	H062	109.4	120.0
N8	C7	C6	H071	234.7	239.9
N8	C7	C6	H072	125.2	120.0
C6	C7	N8	C9	324.2	180.0
C6	C7	N8	C11	162.4	293.8
H071	C7	C6	H072	250.5	240.1
N3	C6	H061	C7	231.8	240.0
N3	C6	H061	H062	115.9	119.9
C7	C6	H061	H062	244.1	240.0
H061	C6	C7	N8	142.9	66.0
H061	C6	C7	H071	268.1	186.0
H061	C6	C7	H072	17.6	306.0
N3	C6	H062	C7	128.2	120.0
N3	C6	H062	H061	244.0	240.1
C7	C6	H062	H061	115.9	120.0
H062	C6	C7	N8	33.5	305.9
H062	C6	C7	H071	158.7	66.0
H062	C6	C7	H072	268.2	185.9
N8	C7	C6	H061	142.9	66.0
N8	C7	C6	H062	33.5	305.9
C6	C7	N8	H071	125.3	120.1
C6	C7	N8	H072	234.8	240.0
H071	C7	N8	H072	109.5	119.9
C9	N8	C7	C11	161.8	246.3
C7	N8	C9	C10	280.8	283.8
C7	N8	C9	H091	46.0	43.8
C7	N8	C9	H092	155.6	163.8
C7	N8	C11	C12	299.2	163.9
C7	N8	C11	H111	64.5	283.9
C7	N8	C11	H112	173.9	44.0
H071	C7	C6	H061	268.1	186.0
H071	C7	C6	H062	158.7	66.0
C6	C7	H071	N8	232.6	240.0
C6	C7	H071	H072	116.3	120.0
N8	C7	H071	H072	243.7	240.0
H071	C7	N8	C9	198.9	60.0
H071	C7	N8	C11	37.1	173.7
H072	C7	C6	H061	17.6	306.0
H072	C7	C6	H062	268.2	185.9
C6	C7	H072	N8	127.3	120.0
C6	C7	H072	H071	243.7	240.0
N8	C7	H072	H071	116.3	120.0
H072	C7	N8	C9	89.4	300.0
H072	C7	N8	C11	287.6	53.7
C9	N8	C7	H071	198.9	60.0
C9	N8	C7	H072	89.4	300.0
C7	N8	C9	C11	198.3	113.7
C9	N8	C11	C12	136.3	277.6
C9	N8	C11	H111	261.6	37.6
C9	N8	C11	H112	11.0	157.7
C10	C9	N8	H091	234.7	240.0
C10	C9	N8	H092	125.2	120.0
N8	C9	C10	O16	161.9	184.5
N8	C9	C10	O15	341.2	4.5
H091	C9	N8	H092	250.5	240.0
C11	N8	C7	H071	37.1	173.7
C11	N8	C7	H072	287.6	53.7
C7	N8	C11	C9	162.9	246.3
C11	N8	C9	C10	82.5	170.1
C11	N8	C9	H091	207.7	290.1
C11	N8	C9	H092	317.2	50.1
C12	C11	N8	H111	234.7	240.0
C12	C11	N8	H112	125.3	120.0
N8	C11	C12	O13	160.4	0.0
N8	C11	C12	O14	336.8	180.0
H111	C11	N8	H112	250.6	240.0
C10	C9	N8	C11	82.5	170.1
N8	C9	C10	H091	125.3	120.0
N8	C9	C10	H092	234.7	240.0
H091	C9	C10	H092	109.4	120.0
O16	C10	C9	O15	180.7	180.0
C9	C10	O16	H16	180.0	180.0
H091	C9	N8	C11	207.7	290.1
N8	C9	H091	C10	242.4	240.0
N8	C9	H091	H092	121.2	120.0
C10	C9	H091	H092	238.9	240.0
H091	C9	C10	O16	36.7	64.5
H091	C9	C10	O15	215.9	244.5
H092	C9	N8	C11	317.2	50.1
N8	C9	H092	C10	117.6	120.0
N8	C9	H092	H091	238.8	240.0
C10	C9	H092	H091	121.2	120.0
H092	C9	C10	O16	287.2	304.5
H092	C9	C10	O15	106.5	124.5
O16	C10	C9	H091	36.7	64.5
O16	C10	C9	H092	287.2	304.5
C9	C10	O16	O15	179.3	180.0
O15	C10	C9	H091	215.9	244.5
O15	C10	C9	H092	106.5	124.5
C9	C10	O15	O16	180.7	180.0
O15	C10	O16	H16	0.7	0.0
H16	O16	C10	O15	0.7	0.0
N8	C11	C12	H111	125.3	120.0
N8	C11	C12	H112	234.7	240.0
H111	C11	C12	H112	109.4	120.1
O13	C12	C11	O14	183.5	180.0
C11	C12	O14	H14	180.0	180.0
N8	C11	H111	C12	231.0	240.0
N8	C11	H111	H112	115.5	120.0
C12	C11	H111	H112	244.5	240.0
H111	C11	C12	O13	35.1	240.0
H111	C11	C12	O14	211.5	60.0
N8	C11	H112	C12	129.0	119.9
N8	C11	H112	H111	244.5	240.0
C12	C11	H112	H111	115.5	120.0
H112	C11	C12	O13	285.6	120.0
H112	C11	C12	O14	102.1	299.9
O13	C12	C11	H111	35.1	240.0
O13	C12	C11	H112	285.6	120.0
C11	C12	O13	O14	176.5	180.0
O13	C12	O14	H14	356.5	360.0
O14	C12	C11	H111	211.5	60.0
O14	C12	C11	H112	102.1	299.9
C11	C12	O14	O13	183.5	180.0